Index Catalog // ScholarsArchive@OSU

Do Oak Barrels Contribute To The Variability of The Microbiome of Barrel-Aged Beers?

Creator:: Shayevitz, Avi M.
Abstract:: Lambic and other barrel-aged beer styles are gaining popularity in the United States and Europe and are often treated as a premium product that can command a premium price. However, these styles can be prone to spoilage during the barrel-aging process, which represents a significant time and product commitment by...
Resource Type:: Masters Thesis
Full Text:: approved: ______________________________________________________ Christopher D. Curtin Lambic and

Transcriptomic approaches for discovering regenerative and developmental regulatory networks in zebrafish

Creator:: Garland, Michael A.
Abstract:: Zebrafish are capable of fully regenerating organs and tissue such as their caudal fin, which is similar to a human regrowing an arm or a leg. In contrast, most mammals including humans have a greatly reduced capacity for wound healing. The ability of zebrafish to undergo this regenerative process, called...
Resource Type:: Dissertation
Full Text:: : _____________________________________________________________________ Robert L. Tanguay Zebrafish are capable of fully regenerating organs and tissue such as

Creating High Throughput Low Cost Analysis of Different Labor-Intensive Repetitive Research Processes

Creator:: Sullivan, Christopher M.
Abstract:: Many research projects suffer from limited data causing poor statistical analysis or limited results. The movement to high throughput methods has been building for many years and cross many different disciplines. Lots of these methods start out using pathways that generate large amounts of data but have limited methods to...
Resource Type:: Masters Thesis
Full Text:: , D. Lesmeister, L. Duchac, and B. Padmaraju for the work with me on CNN and data processing

High-Throughput Sequencing of Arabidopsis microRNAs : Evidence for Frequent Birth and Death of MIRNA Genes

Creator:: Fahlgren, Noah, Howell, Miya D., Kasschau, Kristin D., Sullivan, Christopher M., Cumbie, Jason S., Givan, Scott A., Law, Theresa F., Grant, Sarah R., Dangl, Jeffrey L., and Carrington, James C.
Abstract:: In plants, microRNAs (miRNAs) comprise one of two classes of small RNAs that function primarily as negative regulators at the posttranscriptional level. Several MIRNA genes in the plant kingdom are ancient, with conservation extending between angiosperms and the mosses, whereas many others are more recently evolved. Here, we use deep...
Resource Type:: Article
Full Text:: Y 9 (2 0 6 ) 2 (5 1 ) C C -N B S -L R R A t1 g 5 1 4 8 0 (1 )d , A t5 g 4 3 7 4 0

Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion Virulence Regulon across the Pseudomonas syringae Phylogeny

Creator:: Mucyn, Tatiana S., Yourstone, Scott, Lind, Abigail L., Biswas, Surojit, Nishimura, Marc T., Baltrus, David A., Cumbie, Jason S., Chang, Jeff H., Jones, Corbin D., Dangl, Jeffery L., and Grant, Sarah R.
Abstract:: Pseudomonas syringae is a phylogenetically diverse species of Gram-negative bacterial plant pathogens responsible for crop diseases around the world. The HrpL sigma factor drives expression of the major P. syringae virulence regulon. HrpL controls expression of the genes encoding the structural and functional components of the type III secretion system...
Resource Type:: Article

Toxicogenomic Biomarkers Associated with PAH Carcinogenic Potential in a 3D in Vitro Bronchial Epithelial Model

Creator:: Chang, Yvonne
Abstract:: The environmental health science community recognizes polycyclic aromatic hydrocarbons (PAHs) as a re-emerging class of environmental pollutants due to their persistence and prominence in mixtures of concern. Due to their widespread distribution in the environment, exposure to PAHs often occur as complex chemical mixtures. Exposures are linked to numerous adverse...
Resource Type:: Dissertation
Full Text:: -1970. 5. Mackay, D. and D. Callcott, Partitioning and Physical Chemical Properties of PAHs, in PAHs

Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia

Creator:: Muñoz-Rodríguez, Pablo, Carruthers, Tom, Wood, John R.I., Williams, Bethany R.M., Weitemier, Kevin, Kronmiller, Brent, Ellis, David, Anglin, Noelle L., Longway, Lucas, Harris, Stephen A., Rausher, Mark D., Kelly, Steven, Liston, Aaron, and Scotland, Robert W.
Abstract:: The sweet potato is one of the world’s most widely consumed crops, yet its evolutionary history is poorly understood. In this paper, we present a comprehensive phylogenetic study of all species closely related to the sweet potato and address several questions pertaining to the sweet potato that remained unanswered. Our...
Resource Type:: Article
Full Text:: Ellis, Noelle L. Anglin, Lucas Longway, Stephen A. Harris, Mark D. Rausher, Steven Kelly, Aaron Liston

Mutualistic Co-evolution of Type III Effector Genes in Sinorhizobium fredii and Bradyrhizobium japonicum

Creator:: Kimbrel, Jeffrey A., Thomas, William J., Jiang, Yuan, Creason, Allison L., Thireault, Caitlin A., Sachs, Joel L., and Chang, Jeff H.
Abstract:: Two diametric paradigms have been proposed to model the molecular co-evolution of microbial mutualists and their eukaryotic hosts. In one, mutualist and host exhibit an antagonistic arms race and each partner evolves rapidly to maximize their own fitness from the interaction at potential expense of the other. In the opposing...
Resource Type:: Article
Full Text:: . Mol Microbiol 28: 1381–1389. 15. Xin D-W, Liao S, Xie Z-P, Hann DR, Steinle L, et al. (2012

Genome-Wide Profiling and Analysis of Arabidopsis siRNAs

Creator:: Kasschau, Kristin D., Fahlgren, Noah, Chapman, Elisabeth J., Sullivan, Christopher M., Cumbie, Jason S., Givan, Scott A., and Carrington, James C.
Abstract:: Eukaryotes contain a diversified set of small RNA-guided pathways that control genes, repeated sequences, and viruses at the transcriptional and posttranscriptional levels. Genome-wide profiles and analyses of small RNAs, particularly the large class of 24-nucleotide (nt) short interfering RNAs (siRNAs), were done for wild-type Arabidopsis thaliana and silencing pathway mutants...
Resource Type:: Article
Full Text:: siRNAs Kristin D. Kasschau 1,2 , Noah Fahlgren 1,2,3 , Elisabeth J. Chapman 1,2,3 , Christopher M

Heterokaryon Incompatibility Is Suppressed Following Conidial Anastomosis Tube Fusion in a Fungal Plant Pathogen

Creator:: Ishikawa, Francine H., Souza, Elaine A., Shoji, Jun-ya, Connolly, Lanelle, Freitag, Michael, Read, Nick D., and Roca, M. Gabriela
Abstract:: It has been hypothesized that horizontal gene/chromosome transfer and parasexual recombination following hyphal fusion between different strains may contribute to the emergence of wide genetic variability in plant pathogenic and other fungi. However, the significance of vegetative (heterokaryon) incompatibility responses, which commonly result in cell death, in preventing these processes...
Resource Type:: Article
Full Text:: * Strain A B C D E F G H I J K L P Race LV115 + 2 2 2 2 2 + 2 2 2 2 2 + 65 LV 51 + 2 2 + 2 2 + 2 2 2 2 2

ScholarsArchive@OSU

Do Oak Barrels Contribute To The Variability of The Microbiome of Barrel-Aged Beers?

Transcriptomic approaches for discovering regenerative and developmental regulatory networks in zebrafish

Creating High Throughput Low Cost Analysis of Different Labor-Intensive Repetitive Research Processes

High-Throughput Sequencing of Arabidopsis microRNAs : Evidence for Frequent Birth and Death of MIRNA Genes

Variable Suites of Non-effector Genes Are Co-regulated in the Type III Secretion Virulence Regulon across the Pseudomonas syringae Phylogeny

Toxicogenomic Biomarkers Associated with PAH Carcinogenic Potential in a 3D in Vitro Bronchial Epithelial Model

Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia

Mutualistic Co-evolution of Type III Effector Genes in Sinorhizobium fredii and Bradyrhizobium japonicum

Genome-Wide Profiling and Analysis of Arabidopsis siRNAs

Heterokaryon Incompatibility Is Suppressed Following Conidial Anastomosis Tube Fusion in a Fungal Plant Pathogen

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