This is an author's peer-reviewed final manuscript, as accepted by the publisher. The published article is copyrighted by Coastal Education and Research Foundation (CERF) and can be found at: https://doi.org/10.2112/SI65-235.1
The present work characterizes the time-space scales of variability and forcing dependencies of a unique 26 year record of daily to hourly shoreline data from a steep beach at Duck, North Carolina. Shoreline positions over a 1500 m alongshore span were estimated using a new algorithm called ASLIM based on...
Swash hydrodynamics were investigated on an intermediate beach using runup data obtained from video images. Under mild, near-constant, offshore wave conditions, the presence of a sandbar and the tidally controlled water depth over its crest determined whether most of the incoming waves broke before reaching the shoreline. This forced a...
A three-part algorithm is described and tested to provide robust bathymetry maps based solely on long time series observations of surface wave motions. The first phase consists of frequency-dependent characterization of the wave field in which dominant frequencies are estimated by Fourier transform while corresponding wave numbers are derived from...
A methodology is described for assimilating observations in a steady state twodimensional
horizontal (2‐DH) model of nearshore hydrodynamics (waves and currents),
using an ensemble‐based statistical estimator. In this application, we treat bathymetry as a
model parameter, which is subject to a specified prior uncertainty. The statistical estimator
uses state augmentation...
Optical remote sensing is used to measure flow patterns in the swash zone. Timestack images are analyzed to measure the asymmetry and the relative duration of the inflow into the swash zone. This varies significantly between individual swashes, contrary to the classical analytical swash model for runup induced by bores,...
A form of the linear, inviscid shallow water wave equation which includes alongshore uniform, but cross-shore variable, longshore currents and bathymetry is presented. This formulation provides a continuum between gravity waves (either leaky or edge waves) on a longshore current, and the recently discovered shear waves. In this paper we...
Synchronous and colocated optical and microwave
signals from waves in the surf zone are presented and analyzed.
The field data were collected using a high-resolution video system
and a calibrated horizontally polarized marine radar during the
decaying phase of a storm. The resulting changes in the received
signals from varying...
An exact integral solution for the moisture profile in growing fingers in sandy soil is derived from Richards' equation. The solution provides moisture content along a finger as a function of position and time and provides applicable results, including the calculation of the asymptotic matric potential of a growing finger...
A nonlinear model is developed to study the time‐dependent relationship between the alongshore variability of a sandbar, a(t), and alongshore‐averaged sandbar position, xc(t). Sediment transport equations are derived from energetics‐based formulations. A link between this continuous physical representation and a parametric form describing the migration of sandbars of constant shape...
We investigate the momentum balance in the surf zone, in a setting which is weakly varying in the alongshore direction. Our focus is on the role of nonlinear advective terms. Using numerical experiments, we find that advection tends to counteract alongshore variations in momentum flux, resulting in more uniform kinematics....
Bathymetry is a major factor in determining nearshore and surf zone wave transformation and
currents, yet is often poorly known. This can lead to inaccuracy in numerical model predictions. Here
bathymetry is estimated as an uncertain parameter in a data assimilation system, using the ensemble Kalman
filter (EnKF). The system...
Shore-based video remote sensing is used to observe and continually monitor nonlinear internal waves
propagating across the inner shelf. Month-long measurements of velocity from bottom-mounted acoustic
Doppler current profilers and temperature from thermistor chains at the 10- and 20-m isobaths are combined
with sea surface imagery from a suite of...
Open Educational Resources (OER) are increasingly used
in the higher education landscape as a solution for a variety of
copyright, publishing and cost-prohibiting issues. While OERs are
becoming more common, reports of usability tests that evaluate how
well learners can use them to accomplish their learning tasks have
lagged behind....
Accurate estimation of historical abundance provides an essential baseline for judging the recovery of the great whales. This is particularly challenging for whales hunted prior to twentieth century modern whaling, as population-level catch records are often incomplete. Assessments of whale recovery using pre-modern exploitation indices are therefore rare, despite the...
The strength-normalized fatigue endurance strength of the bulk metallic glass (BMG) Zr₅₂.₅Cu₁₇.₉Ni₁₄.₆Al₁₀Ti₅ (Vitreloy 105) has been reported to be the highest for any BMG; however, to date, there has been no explanation of why this material is so much better than other Zr-based compositions. In this study, the fatigue-crack growth...
Hexagonal AMO₂ and AMO₃ phases have the same basic structure, and intermediate compositions for this structure have been prepared by topotactic oxidation of AMO₂ phases such as RCuO₂, where R is a trivalent rare earth cation. We now find that such intermediate phases can also be prepared by topotactic reduction...
Published May 1973. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
In the late 1850s, few young Jews, recently arrived in the United States from Poland, chose to live in Florida. Fortunately, one who did, Max White, wrote down his memoirs of those years, leaving us a remarkable, very personal account of life on the Florida frontier as well as a...
Ontogenetic changes in resource use often delimit transitions between life stages. Ecological and individual factors can cause variation in the timing and consistency of these transitions, ultimately affecting community and population dynamics through changes in growth and survival. Therefore, it is important to document and understand behavioral and life history...
The detection and determination of clusters has been of special interest among researchers from different fields for a long time. In particular, assessing whether the clusters are significant is a question that has been asked by a number of experimenters. In Fuentes and Casella (2009), the authors put forth a...
Small crack fatigue is a widely recognized problem in the fatigue of materials; however, there has been limited progress in developing methods for predicting small crack fatigue behavior. In this paper, small crack effects due to crack bridging are addressed. A fatigue threshold R-curve was measured for a 99.5% pure...
For each Cantor set C in R³, all points of which have bounded local genus, we show that there are infinitely many inequivalent Cantor sets in R³ with the complement having the same fundamental group as the complement of C. This answers a question from Open Problems in Topology and...
Curly dock (Rumex crispus L.) is a perennial. It does
not have creeping roots or rhizomes (Figure 1). Leaves
are oblong to nearly lanceshaped, often 12 inches or more
long, with wavy (crisped) margins (Figure 2). Erect, generally
unbranched stems up to 5 feet tall are produced in spring
and...
We report here that (4R,9Z)-hexadec-9-en-4-olide [(R)-desmolactone] is a sex attractant or sex pheromone for multiple species and subspecies in the cerambycid genus Desmocerus. This compound was previously identified as a female-produced sex attractant pheromone of Desmocerus californicus californicus. Headspace volatiles from female Desmocerus aureipennis aureipennis contained (R)-desmolactone, and the antennae...
To investigate the effects of logging, three small watersheds in the Alsea River basin on the west slope of the Oregon Coast Range were selected for study. This was an interdisciplinary investigation to evaluate the influence of specific logging methods on stream regimen and on aquatic resources. The study plan...
Extensive first-pass metabolism of ingested bisphenol A (BPA) in the gastro-intestinal tract and liver restricts blood concentrations of bioactive BPA to < 1% of total BPA in humans and non-human primates. Absorption of ingested BPA through non-metabolizing tissues of the oral cavity, recently demonstrated in dogs, could lead to the...
Using spatial autocorrelation analysis, we
examined the within-population genetic structure of
Rhizopogon vinicolor and R. vesiculosus, two hypogeous
ectomycorrhizal (EM) species that are sympatric
sister taxa known to differ in their clonal structure.
We collected 121 sporocarps and 482 tuberculate EM
of both species from a 20 ha forest stand...
Many microbial, fungal, or oomcyete populations violate assumptions for population
genetic analysis because these populations are clonal, admixed, partially
clonal, and/or sexual. Furthermore, few tools exist that are specifically designed for
analyzing data from clonal populations, making analysis difficult and haphazard.
We developed the R package poppr providing unique tools...
Sensory hair cells convert mechanical motion into chemical signals. Otoferlin, a six-C2 domain transmembrane protein linked to deafness in humans, is hypothesized to play a
role in exocytosis at hair cell ribbon synapses. To date however, otoferlin has been
studied almost exclusively in mouse models, and no rescue experiments have...
Thomas and Megahan [1998] provide a thoughtful reanalysis of our earlier paper [Jones and Grant, 1996]. Thomas and Megahan [1998] (hereinafter referred to as T&M) reacted to three assertions made by Jones and Grant [1996] (hereinafter referred to as J&G): (1) "forest harvesting has increased peak discharges by as much...
This dataset consists of vascular plant species cover estimates collected from 12, 1x1-m quadrats, nested within 15x15-m plots that excluded and were open to wild ungulate access. The wild ungulate exclusion experiment was conducted in young forest plantations (<6 years old), each randomly assigned to one of 3 silvicultural herbicide...
Pyrenophora tritici-repentis is a necrotrophic fungus causal to the disease tan spot of wheat, whose contribution to crop loss has increased significantly during the last few decades. Pathogenicity by this fungus is attributed to the production of host-selective toxins ( HST), which are recognized by their host in a genotype-specific...
We used spatial optimization to analyze alternative restoration scenarios and quantify tradeoffs for a large, multifaceted restoration program to restore resiliency to forest landscapes in the western US. We specifically examined tradeoffs between provisional ecosystem services, fire protection, and the amelioration of key ecological stressors. The results revealed that attainment...
Many wind-power facilities in the United States have established effective monitoring programs to determine turbine-caused fatality rates of birds and bats, but estimating the number of fatalities of rare species poses special difficulties. The loss of even small numbers of individuals may adversely affect fragile populations, but typically, few (if...
A simple theory is presented for steady geostrophic circulation of a stratified fluid in a rectangular basin with a circumpolar connection. The interior flow obeys the β-plane Sverdrup vorticity balance, and the circulation is closed by geostrophic boundary currents. The circulation is forced by surface thermal gradients and wind-driven Ekman...
Background: Pearl millet [Pennisetum glaucum (L.) R. Br.] is a widely cultivated drought-and high-temperature tolerant C4 cereal grown under dryland, rainfed and irrigated conditions in drought-prone regions of the tropics and sub-tropics of Africa, South Asia and the Americas. It is considered an orphan crop with relatively few genomic and...
The implicit particle filter is applied to a stochastically forced shallow water model of nearshore
flow, and found to produce reliable state estimates with tens of particles. The state vector of this model consists
of a height anomaly and two horizontal velocity components at each point on a 128 x...
A layered model of the study circulation in the South Pacific Ocean is constructed along the lines of Luyten, Pedlosky and Stommel, and driven by the mean annual wind stress distributions computed by Hellerman and Rosenatein. The results of the model agree quite well with published maps of topography of...
It has been just over five years since the first ‘Canine Special Issue’ was published in Behavioral Processes. As predicted in that issue, we have seen exponential growth in the number of researchers studying canine behavior, and consequently in the number of new publications arising from laboratories around the world....
A new functional gene database, FOAM (Functional Ontology Assignments for Metagenomes), was developed to screen environmental metagenomic sequence datasets. FOAM provides a new functional ontology dedicated to classify gene functions relevant to environmental microorganisms based on Hidden Markov Models (HMMs). Sets of aligned protein sequences (i.e. ‘profiles’) were tailored to...
Accelerated release of carbon from soils is one
of the most important feedbacks related to anthropogenically
induced climate change. Studies addressing the mechanisms
for soil carbon release through organic matter decomposition
have focused on the effect of changes in the average temperature,
with little attention to changes in temperature variability....
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A sinple forestry illustration of a negative feedback (FIGLRE
Cytochrome B sequence data (FASTA format) from the paper “Seasonal distribution and environmental associations among late larval and juvenile rockfish (Sebastes spp.) off Oregon and Washington: new insights based on genetics”. The data was generated from a sample of 2534 unknown, field collected late-larval and juvenile rockfishes from the Pacific...
We introduce methods and software for estimating total seawater alkalinity from salinity and any combination of up to four other parameters (potential temperature, apparent oxygen utilization, total dissolved nitrate, and total silicate). The methods return estimates anywhere in the global ocean with comparable accuracy to other published alkalinity estimation techniques....
The domestic cat (Felis silvestris catus) has shared an intertwined existence with humans for thousands of years, living on our city streets and in our homes. Yet, little scientific research has focused on the cognition of the domestic cat, especially in comparison to human’s other companion, the domestic dog (Canis...