Using spatial autocorrelation analysis, we
examined the within-population genetic structure of
Rhizopogon vinicolor and R. vesiculosus, two hypogeous
ectomycorrhizal (EM) species that are sympatric
sister taxa known to differ in their clonal structure.
We collected 121 sporocarps and 482 tuberculate EM
of both species from a 20 ha forest stand...
In this study we analyzed the spatial
structure of ectomycorrhizal fungi present in the soils
as resistant propagules (e.g. spores or sclerotia) in
a mixed-conifer forest in the Sierra Nevada, California.
Soils were collected under old-growth Abies spp.
stands across approximately 1 km and bioassayed with
seedlings of hosts that...
Distinct aggregations of fungal hyphae and rhizomorphs, or "mats", formed by some genera of ectomycorrhizal (EcM) fungi are common features of soils in coniferous forests of the Pacific Northwest. We measured in situ respiration rates of Piloderma mats and neighboring non-mat soils in an old-growth Douglas-fir forest in western Oregon...
Swiss needle cast (SNC) is a disease specific to Douglas-fir (Pseudotsuga menziesii) caused by the ascomycete Phaeocryptopus gaeumannii. Here we examine characteristics of the EM fungus community that are potentially useful in predictive models that would monitor forest health. We found that mean EM density (number of colonized root tips/soil...
Cenococcum is a genus of ectomycorrhizal Ascomycota that has a broad host range and geographic distribution. It is not known to produce either meiotic or mitotic spores and is known to exist only in the form of hyphae, sclerotia and host-colonized ectomycorrhizal root tips. Due to its lack of sexual...
Recent surveys of belowground fungal biodiversity in Mexico and USA have revealed many undescribed truffle species, including many in the genus Tuber. Here we describe seven new species: Tuber beyerlei, T. castilloi, T. guevarai, T. lauryi, T. mexiusanum, T. miquihuanense and T. walkeri. Phylogenetic analyses place these species within the...
The effect of disturbance on the resistant propagule community (RPC) of ectomycorrhizal
fungi has been given relatively little attention. In this study we investigate the effects of
heat, one important factor of fire disturbances, on the ability of ectomycorrhizal RPC fungi
to colonize Pinus jeffreyi seedlings in greenhouse bioassays. Prior...
The purpose of this study was to estimate the portion of an ectomycorrhizal (ECM) fungi root
community with a hypogeous fruiting habit. We used molecular methods (DNA sequence analysis of the
internally transcribed spacer [ITS] region of rDNA) to compare three viewpoints: ECM fungi on the roots in a
southern...
Fevansia aurantiaca is an orange-colored truffle that has been collected infrequently in the Pacific Northwest of the USA. This sequestrate, hypogeous fungus was originally thought to be related to the genera Rhizopogon or Alpova in the Boletales, but the large, inflated cells in the trama and the very pale spore...
Fungal mitospores may function as dispersal units and/ or spermatia, and thus play a role in
distribution and/or mating of species that produce them. Mitospore production in
ectomycorrhizal (EcM) Pezizales is rarely reported, but here we document mitospore production
by a high diversity of EcM Pezizales on three continents, in...
Published June 1983. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Forest ecosystems of the Pacific Northwest of the USA are changing as a result of climate change. Specifically, rise of global temperatures, decline of winter precipitation, earlier loss of snowpack, and increased summer drought are altering the range of Pinus contorta. Simultaneously, flux in environmental conditions within the historic P....
Solioccasus polychromus gen. & sp. nov., the most brightly colored hypogeous fungus known, is described from Papua New Guinea and tropical northern Australia south into subtropical forests along the Queensland coast and coastal mountains to near Brisbane. Phylogenetic analysis of molecular data places it as a sister genus to Bothia...
Six species of Cystangium, a genus of
sequestrate taxa related to Russula, were collected
in Patagonia (Argentina and Chile) during autumn
2001. Two species, C. depauperatum Singer & A.H.
Sm. and C. nothofagi (E. Horak) Trappe, Castellano &
T. Lebel, were already known from this region, while
four new species,...
Four species of the sequestrate fungal genus Elaphomyces are reported from New Zealand: Elaphomyces bollardii sp. nov. associated with Leptospermum spp. and Kunzea ericoides, E. luteicrustus sp. nov. associated with Nothofagus menziesii, E. putridus sp. nov. associated with Nothofagus spp., and an unnamed species associated with Nothofagus spp.
• Understanding spatial and temporal patterns present in ectomycorrhizal fungal
community structure is critical to understanding both the scale and duration of
the potential impact these fungi have on the plant community. While recent studies
consider the spatial structure of ectomycorrhizal communities, few studies consider
how this changes over time....
Many obligate symbiotic fungi are difficult to maintain in culture, and there is a growing need for alternative approaches to obtaining tissue and subsequent genomic assemblies from such species. In this study, the genome of Elaphomyces granulatus was sequenced from sporocarp tissue. The genome assembly remains on many contigs, but...
The diets of a fungal specialist, northern flying squirrel (Glaucomys sabrinus (Shaw, 1801)), and a dietary generalist,
lodgepole chipmunk (Neotamias speciosus (Merriam, 1890)), were examined in the old-growth, mixed-conifer forest
at the Teakettle Experimental Forest in California’s southern Sierra Nevada. Spores of fungi were identified from fecal
pellets collected from...
Correction
5 Mar 2013: Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, et al. (2013) Correction: Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi. PLOS Pathogens 9(3): 10.1371/annotation/fcca88ac-d684-46e0-a483-62af67e777bd
Seedlings of Pseudotsuga menziesii (Mirb.) Franco and Betula papyrifera Marsh. were grown in the greenhouse in monoculture and dual culture in soils collected from a young mixed species plantation in the southern interior of British Columbia. The objectives of the study were (i) to evaluate the ability of P. menziesii...
Sedecula is a monotypic genus of hypogeous fungi that is rare and endemic to dry conifer forests of the western United States. The only known species, Sedecula pulvinata, was described in 1941 and its taxonomic placement and trophic status have remained uncertain ever since. Here we employ isotopic and molecular...
Sedecula is a monotypic genus of hypogeous fungi that is rare and endemic to dry conifer forests of the western United States. The only known species, Sedecula pulvinata, was described in 1941 and its taxonomic placement and trophic status have remained uncertain ever since. Here we employ isotopic and molecular...
Fuel accumulation and climate shifts are predicted to increase the frequency of high-severity fires in pon-derosa pine (Pinus ponderosa) forests of central Oregon. The combustion of fuels containing large downedwood can result in intense soil heating, alteration of soil properties, and mortality of microbes. Previousstudies show ectomycorrhizal fungi (EMF) improve...
Rhizopogon subgenus Villosuli are the only
members of the genus known to form an ectomycorrhizal
relationship exclusively with Pseudotsuga. The
specificity of this host relationship is unusual in that
Rhizopogon is broadly associated with several tree
genera within the Pinaceae and relationships with a
host genus are typically distributed across...
We examined the extent to which arbuscular mycorrhizal (AM) fungi root improved the acquisition of simple organic nitrogen (ON) compounds by their host plants. In a greenhouse-based study, we used quantum dots (fluorescent nanoparticles) to assess uptake of each of the 20 proteinaceous amino acids by AM-colonized versus uncolonized plants....
• Premise of study: In the mixed evergreen forests in the western United States, Arbutus menziesii is able to quickly resprout following disturbance and, as such, act as a nurse tree during forest regeneration. The mechanism for this nurse tree effect has frequently been ascribed to mycorrhizal fungi, but no...
Phylogenetic analyses based on nLSU and ITS sequence data indicate that the sequestrate genus Gigasperma is polyphyletic. Gigasperma cryptica, which is known only from New Zealand, has affinities with the Cortinariaceae whereas G. americanum and two additional undescribed taxa from western North America are derived from Lepiota within the Agaricaceae....
In many western North American forests, prescribed burning and mechanical thinning are widely used to reduce
fuels and restore stand conditions after a century of fire suppression. Few studies have followed the relative impacts
of these treatments on the production and consumption of truffles in forest ecosystems, particularly in the...
In many western North American forests, prescribed burning and mechanical thinning are widely used to reduce
fuels and restore stand conditions after a century of fire suppression. Few studies have followed the relative impacts
of these treatments on the production and consumption of truffles in forest ecosystems, particularly in the...
This study was designed to measure the microbiological and chemical characteristics of forest soils in a chronosequence of harvested Douglas-fir (Pseusotsuga menziesii (Mirb.) Franco) stands in different climatic settings. Mineral soil samples were collected along transects running from old-growth (OG) forests into harvested stands of ages 5, 15, and 40...
To gain a better understanding of how rapidly microbial communities respond to different magnitudes of perturbation that mimic minor or catastrophic disturbances.
Two montane sites in the western Cascade Mountains of Oregon with adjacent areas of forest and meadow vegetation were studied. A reciprocal transplant experiment evaluated both minor (soil...
Truffles have evolved from epigeous (aboveground) ancestors in nearly every major lineage of fleshy fungi. Because accelerated rates of morphological evolution accompany the transition to the truffle form, closely related epigeous ancestors remain unknown for most truffle lineages. This is the case for the quintessential truffle genus Tuber, which includes...
Although ecosystem management techniques are designed to enhance species diversity in managed forests, no comprehensive study has been conducted to evaluate effects of such techniques on diversity and productivity of hypogeous fungi (truffles). During this study, truffles were collected in a 55- to 65-year-old Douglas-fir forest from March 1993 through...
Genome-enabled mycology is a rapidly expanding field that is characterized by the pervasive use of genome-scale data and associated computational tools in all aspects of fungal biology. Genome-enabled mycology is integrative and often requires teams of researchers with diverse skills in organismal mycology, bioinformatics and molecular biology. This issue of...
Amino sugars in fungal cell walls (such as chitin) represent an important source of nitrogen (N) in many forest soil ecosystems. Despite the importance of this material in soil nitrogen cycling, comparatively little is known about abiotic and biotic controls on and the timescale of its turnover. Part of the...
Calcium oxalate (Ca oxalate) is an insoluble biomineral that forms in plants and fungi, and occurs in soils
across many types of ecosystems. Assessing how Ca oxalate may shape ecosystem Ca cycling requires
information on the distribution of Ca oxalate among plant biomass, detritus, and mineral soil, and how
it...
We compared the abundance, diversity, and composition of truffles in riparian and upland areas within a
mixed-conifer forest of the Sierra Nevada of California. We sampled for truffles in a single watershed over two seasons
(spring and summer) and 4 years to determine whether truffles were more abundant and diverse...
Retreating glaciers and the periglacial areas they vacate for organismal colonization produce a harsh environment of extreme radiation, nutrient limitations, and temperature oscillations. They provide a model system for studying mechanisms that drive establishment and early assembly of communities. Here, we synthesize more than twenty years of research at the...
Postfire logging recoups the economic value of timber killed by wildfire, but whether such forest management activity supports or impedes forest recovery in stands differing in structure from historic conditions remains unclear. The aim of this study was to determine the impact of mechanical logging after wildfire on soil bacterial...
During 1997–1998, we investigated the influence of both the relative abundance of truffles, preferred food
items, and microhabitat structure on the occurrence of northern flying squirrels (Glaucomys sabrinus Shaw) in oldgrowth
forest habitat of the Sierra Nevada Range, U.S.A. Following live-trapping sessions, we searched the forest floor
for truffle diggings...
During 1997–1998, we investigated the influence of both the relative abundance of truffles, preferred food
items, and microhabitat structure on the occurrence of northern flying squirrels (Glaucomys sabrinus Shaw) in old-growth
forest habitat of the Sierra Nevada Range, U.S.A. Following live-trapping sessions, we searched the forest floor
for truffle diggings...
Like much of the western United States, California’s forest has been severely altered by a century of fire suppression. The Sierra Nevada’s largest forest type, mixed conifer, which is primary habitat for more vertebrate species than any other Californian forest community, historically burned every 12–17 years. In 1894, John Muir...
This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by the Genetics Society of America. The published article can be found at: https://doi.org/10.1534/g3.116.027045
Molecular phylogenctic analyses indicate that the monophyletic classes Orbiliomycetes and Pezizomycetes are among the earliest diverging branches of Pezizomycotina, the largest subphylum of the Ascomycota. Although Orbiliomycetes is resolved as the most basal lineage in some analyses, molecular support for the node resolving the relationships between the two classes is...
Kalapuya is described as a new, monotypic truffle genus in the Morchellaceae known only from the Pacific northwestern United States. Its relationship to other hypogeous genera within Morchellaceae is explored by phylogenetic analysis of the ribosomal LSU and EF1α protein coding region. The type species, K. brunnea, occurs in Douglas-fir...
Xylona heveae has only been isolated as an endophyte of rubber trees. In an effort to understand the genetic basis of endophytism, we compared the genome contents of X. heveae and 36 other Ascomycota with diverse lifestyles and nutritional modes. We focused on genes that are known to be important...
Background
Two major mycoparasitic lineages, the family Hypocreaceae and the genus Tolypocladium, exist within the fungal order, Hypocreales. Peptaibiotics are a group of secondary metabolites almost exclusively described from Trichoderma species of Hypocreaceae. Peptaibiotics are produced by nonribosomal peptide synthetases (NRPSs) and have antibiotic and antifungal activities. Tolypocladium species are...