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Merritt, Patrick A.
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- Creator:
- Cosson, Patrick, Sofer, Luc, Hien Le, Quang, Léger, Valérie, Schurdi-Levraud, Valérie, Whitham, Steven A., Yamamoto, Miki L., Gopalan, Suresh, Le Gall, Olivier, Chandresse, Thierry, Carrington, James C., and Revers, Frédéric
- Abstract:
- Restriction of long-distance movement of several potyviruses in Arabidopsis (Arabidopsis thaliana) is controlled by at least three dominant restricted TEV movement (RTM) genes, named RTM1, RTM2, and RTM3. RTM1 encodes a protein belonging to the jacalin family, and RTM2 encodes a protein that has similarities to small heat shock proteins....
- Resource Type:
- Article
- Full Text:
- Potyviruses, Is a Member of a New Plant Gene Family Encoding a Meprin and TRAF Homology Domain-Containing
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- Creator:
- Albins, Mark A. and Lyons, Patrick J.
- Abstract:
- Field and laboratory observations of feeding by invasive Pacific red lionfish Pterois volitans were conducted during June through August of 2008, 2009 and 2010 near Lee Stocking Island, Bahamas. Observations of this invasive marine predator revealed a previously undocumented piscivorous behavior. While slowly approaching prey fish, lionfish produce jets of...
- Resource Type:
- Article
- Full Text:
- fish Mark A. Albins1,*, Patrick J. Lyons2 1Department of Zoology, Oregon State University, 3029
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- Creator:
- Loper, Joyce E., Hassan, Karl A., Mavrodi, Dmitri V., Davis, Edward W., II, Lim, Chee Kent, Shaffer, Brenda T., Elbourne, Liam D. H., Stockwell, Virginia O., Hartney, Sierra L., Breakwell, Katy, Henkels, Marcella D., Tetu, Sasha G., Rangel, Lorena I., Kidarsa, Teresa A., Wilson, Neil L., van de Mortel, Judith E., Song, Chunxu, Blumhagen, Rachel, Radune, Diana, Hostetler, Jessica B., Brinkac, Lauren M., Durkin, A. Scott, Kluepfel, Daniel A., Wechter, W. Patrick, Anderson, Anne J., Kim, Young Cheol, Pierson, Leland S., III, Pierson, Elizabeth A., Lindow, Steven E., Kobayashi, Donald Y., Raaijmakers, Jos M., Weller, David M., Thomashow, Linda S., Allen, Andrew E., and Paulsen, Ian T.
- Abstract:
- We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
- Resource Type:
- Article
- Full Text:
- Durkin6, Daniel A. Kluepfel7, W. Patrick Wechter8, Anne J. Anderson9, Young Cheol Kim10, Leland S
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- Creator:
- Laurance, William F., Useche, D. Carolina, Rendeiro, Julio, Kalka, Margareta, Bradshaw, Corey J. A., Sloan, Sean P., Laurance, Susan G., Campbell, Mason, Abernethy, Kate, Alvarez, Patricia, Arroyo-Rodriguez, Victor, Ashton, Peter, Benitez-Malvido, Julieta, Blom, Allard, Bobo, Kadiri S., Cannon, Charles H., Cao, Min, Carroll, Richard, Chapman, Colin, Coates, Rosamond, Cords, Marina, Danielsen, Finn, De Dijn, Bart, Dinerstein, Eric, Donnelly, Maureen A., Edwards, David, Edwards, Felicity, Farwig, Nina, Fashing, Peter, Forget, Pierre-Michel, Foster, Mercedes, Gale, George, Harris, David, Harrison, Rhett, Hart, John, Karpanty, Sarah, Kress, W. John, Krishnaswamy, Jagdish, Logsdon, Willis, Lovett, Jon, Magnusson, William, Maisels, Fiona, Marshall, Andrew R., McClearn, Deedra, Mudappa, Divya, Nielsen, Martin R., Pearson, Richard, Pitman, Nigel, van der Ploeg, Jan, Plumptre, Andrew, Poulsen, John, Quesada, Mauricio, Rainey, Hugo, Robinson, Douglas, Roetgers, Christiane, Rovero, Francesco, Scatena, Frederick, Schulze, Christian, Sheil, Douglas, Struhsaker, Thomas, Terborgh, John, Thomas, Duncan, Timm, Robert, Urbina-Cardona, J. Nicolas, Vasudevan, Karthikeyan, Wright, S. Joseph, Arias-G, Juan Carlos, Arroyo, Luzmila, Ashton, Mark, Auzel, Philippe, Babaasa, Dennis, Babweteera, Fred, Baker, Patrick, Banki, Olaf, Bass, Margot, Bila-Isia, Inogwabini, Blake, Stephen, Brockelman, Warren, Brokaw, Nicholas, Bruehl, Carsten A., Bunyavejchewin, Sarayudh, Chao, Jung-Tai, Chave, Jerome, Chellam, Ravi, Clark, Connie J., Clavijo, Jose, Congdon, Robert, Corlett, Richard, Dattaraja, H. S., Dave, Chittaranjan, Davies, Glyn, Beisiegel, Beatriz de Mello, da Silva, Rosa de Nazarepaes, Di Fiore, Anthony, Diesmos, Arvin, Dirzo, Rodolfo, Doran-Sheehy, Diane, Eaton, Mitchell, Emmons, Louise, Estrada, Alejandro, Ewango, Corneille, Fedigan, Linda, Feer, Francois, Fruth, Barbara, Willis, Jacalyn Giacalone, Goodale, Uromi, Goodman, Steven, Guix, Juan C., Guthiga, Paul, Haber, William, Hamer, Keith, Herbinger, Ilka, Hill, Jane, Huang, Zhongliang, Sun, I. Fang, Ickes, Kalan, Itoh, Akira, Ivanauskas, Natalia, Jackes, Betsy, Janovec, John, Janzen, Daniel, Jiangming, Mo, Jin, Chen, Jones, Trevor, Justiniano, Hermes, Kalko, Elisabeth, Kasangaki, Aventino, Killeen, Timothy, King, Hen-biau, Klop, Erik, Knott, Cheryl, Kone, Inza, Kudavidanage, Enoka, Ribeiro, Jose Lahoz da Silva, Lattke, John, Laval, Richard, Lawton, Robert, Leal, Miguel, Leighton, Mark, Lentino, Miguel, Leonel, Cristiane, Lindsell, Jeremy, Ling-Ling, Lee, Linsenmair, K. Eduard, Losos, Elizabeth, Lugo, Ariel, Lwanga, Jeremiah, Mack, Andrew L., Martins, Marlucia, McGraw, W. Scott, McNab, Roan, Montag, Luciano, Thompson, Jo Myers, Nabe-Nielsen, Jacob, Nakagawa, Michiko, Nepal, Sanjay, Norconk, Marilyn, Novotny, Vojtech, O'Donnell, Sean, Opiang, Muse, Ouboter, Paul, Parker, Kenneth, Parthasarathy, N., Pisciotta, Katia, Prawiradilaga, Dewi, Pringle, Catherine, Rajathurai, Subaraj, Reichard, Ulrich, Reinartz, Gay, Renton, Katherine, Reynolds, Glen, Reynolds, Vernon, Riley, Erin, Roedel, Mark-Oliver, Rothman, Jessica, Round, Philip, Sakai, Shoko, Sanaiotti, Tania, Savini, Tommaso, Schaab, Gertrud, Seidensticker, John, Siaka, Alhaji, Silman, Miles R., Smith, Thomas B., de Almeida, Samuel Soares, Sodhi, Navjot, Stanford, Craig, Stewart, Kristine, Stokes, Emma, Stoner, Kathryn E., Sukumar, Raman, Surbeck, Martin, Tobler, Mathias, Tscharntke, Teja, Turkalo, Andrea, Umapathy, Govindaswamy, van Weerd, Merlijn, Rivera, Jorge Vega, Venkataraman, Meena, Venn, Linda, Verea, Carlos, de Castilho, Carolina Volkmer, Waltert, Matthias, Wang, Benjamin, Watts, David, Weber, William, West, Paige, Whitacre, David, Whitney, Ken, Wilkie, David, Williams, Stephen, Wright, Debra D., Wright, Patricia, Xiankai, Lu, Yonzon, Pralad, and Zamzani, Franky
- Abstract:
- The rapid disruption of tropical forests probably imperils global biodiversity more than any other contemporary phenomenon¹⁻³. With deforestation advancing quickly, protected areas are increasingly becoming final refuges for threatened species and natural ecosystem processes. However, many protected areas in the tropics are themselves vulnerable to human encroachment and other environmental...
- Resource Type:
- Article
- Full Text:
- protected areas A list of the authors and their affiliations appears at the end of the paper. The rapid
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- Creator:
- Blake, Victoria C., Kling, Jennifer G., Hayes, Patrick M., Jannink, Jean-Luc, Jillella, Suman R., Lee, John, Matthews, David E., Chao, Shiaoman, Close, Timothy J., Muehlbauer, Gary J., Smith, Kevin P., Wise, Roger P., and Dickerson, Julie A.
- Abstract:
- The use of DNA markers in public sector plant breeding is now the norm. Such markers are common across breeding programs and this commonality enables and enhances collaboration. Therefore, large collaborative research projects that measure several phenotypes across multiple environments coupled with the expanding amount of genotype data attainable with...
- Resource Type:
- Article
- Full Text:
- and Phenotype Resource Victoria C. Blake,* Jennifer G. Kling, Patrick M. Hayes, Jean-Luc Jannink
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- Creator:
- Clark, Peter U., Shakun, Jeremy D., Baker, Paul A., Bartlein, Patrick J., Brewer, Simon, Brook, Edward J., Carlson, Anders E., Cheng, Hai, Kaufman, Darrell S., Liu, Zhengyu, Marchitto, Thomas M., Mix, Alan C., Morrill, Carrie, Otto-Bliesner, Bette L., Pahnke, Katharina, Russell, James M., Whitlock, Cathy, Adkins, Jess F., Blois, Jessica L., Clark, Jorie, Colman, Steven M., Curry, William B., Flower, Ben P., He, Feng, Johnson, Thomas C., Lynch-Stieglitz, Jean, Markgraf, Vera, McManus, Jerry, Mitrovica, Jerry X., Moreno, Patricio I., and Williams, John W.
- Abstract:
- Deciphering the evolution of global climate from the end of the Last Glacial Maximum approximately 19 ka to the early Holocene 11 ka presents an outstanding opportunity for understanding the transient response of Earth's climate system to external and internal forcings. During this interval of global warming, the decay of...
- Resource Type:
- Article
- Full Text:
- deglaciation Peter U. Clarka,1, Jeremy D. Shakunb,1, Paul A. Bakerc, Patrick J. Bartleind, Simon Brewere, Ed
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- Creator:
- Schulte, Jeff B., Kreitzberg, Patrick A., Haglund, Chris V., and Roundy, David
- Abstract:
- We investigate the value of the correlation function of an inhomogeneous hard-sphere fluid at contact. This quantity plays a critical role in statistical associating fluid theory, which is the basis of a number of recently developed classical density functionals. We define two averaged values for the correlation function at contact...
- Resource Type:
- Article
- Full Text:
- , Patrick A. Kreitzberg, Chris V. Haglund, and David Roundy Department of Physics, Oregon State University
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- Creator:
- Puckett, Susan E., Reese, Kaleb A., Mitev, Georgi M., Mullen, Valerie, Johnson, Rudd C., Pomraning, Kyle R., Mellbye, Brett L., Tilley, Lucas D., Iversen, Patrick L., Freitag, Michael, and Geller, Bruce L.
- Abstract:
- Peptide phosphorodiamidate morpholino oligomers (PPMO) are synthetic DNA mimics that bind complementary RNA and inhibit bacterial gene expression. (RFF)₃RXB- AcpP PPMO (R, arginine; F, phenylalanine; X, 6-aminohexanoic acid; B, β-alanine) is complementary to 11 bases of the essential gene acpP (encodes acyl carrier protein). The MIC of (RFF)₃RXB-AcpP was 2.5...
- Resource Type:
- Article
- Full Text:
- Morpholino Oligomers 1 2 Running Title: Morpholino oligomer resistance 3 4 Susan E. Puckett1,a
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- Creator:
- Loper, Joyce E., Hassan, Karl A., Mavrodi, Dmitri V., Davis, Edward W., II, Lim, Chee Kent, Shaffer, Brenda T., Elbourne, Liam D. H., Stockwell, Virginia O., Hartney, Sierra L., Breakwell, Katy, Henkels, Marcella D., Tetu, Sasha G., Rangel, Lorena I., Kidarsa, Teresa A., Wilson, Neil L., van de Mortel, Judith E., Song, Chunxu, Blumhagen, Rachel, Radune, Diana, Hostetler, Jessica B., Brinkac, Lauren M., Durkin, A. Scott, Kluepfel, Daniel A., Wechter, W. Patrick, Anderson, Anne J., Kim, Young Cheol, Pierson, Leland S., III, Pierson, Elizabeth A., Lindow, Steven E., Kobayashi, Donald Y., Raaijmakers, Jos M., Weller, David M., Thomashow, Linda S., Allen, Andrew E., and Paulsen, Ian T.
- Abstract:
- We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
- Resource Type:
- Article
- Full Text:
- Durkin6, Daniel A. Kluepfel7, W. Patrick Wechter8, Anne J. Anderson9, Young Cheol Kim10, Leland S
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- Creator:
- Troch, Peter A., Berne, Alexis, Bogaart, Patrick, Harman, Ciaran, Hilberts, Arno G. J., Lyon, Steve W., Paniconi, Claudio, Pauwels, Valentijn R. N., Rupp, David E., Selker, John S., Teuling, Adriaan J., Uijlenhoet, Remko, and Verhoest, Niko E. C.
- Abstract:
- Based on a literature overview, this paper summarizes the impact and legacy of the contributions of Wilfried Brutsaert and Jean-Yves Parlange (Cornell University) with respect to the current state-of-the-art understanding in hydraulic groundwater theory. Forming the basis of many applications in catchment hydrology, ranging from drought flow analysis to surface...
- Resource Type:
- Article
- Full Text:
- groundwater theory in catchment hydrology: The legacy of Wilfried Brutsaert and Jean-Yves Parlange Peter A
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