Index Catalog // ScholarsArchive@OSU

Soil Matters: Improving Forest Landscape Planning and Management for Diverse Objectives with Soils Information and Expertise

Creator:: Craigg, Terry L., Adams, Paul W., and Bennett, Karen A.
Abstract:: Most forest managers would agree that soils are a fundamental resource of forestlands, yet many planning and management decisions continue to be made without a detailed and spatially explicit understanding of this unique and vital resource. We discuss the value of soil data and interpretations in forest planning. We emphasize...
Resource Type:: Article
Full Text:: ., Adams, P. W., & Bennett, K. A. (2015). Soil Matters: Improving Forest Landscape Planning and Management

Rapid Quantification of Soilborne Pathogen Communities in Wheat-based Long-term Field Experiments

Creator:: Smiley, Richard W., Machado, Stephen, Rhinhart, Karl E. L., Reardon, Catherine L., and Wuest, Stewart B.
Abstract:: This is an author's peer-reviewed final manuscript, as accepted by the publisher. The published article is copyrighted by The American Phytopathological Society and can be found at: https://doi.org/10.1094/PDIS-09-15-1020-RE
Resource Type:: Article
Full Text:: University, Columbia Basin Agricultural Research Center, P.O. Box 370, Pendleton, OR 97801; and Catherine L

Epigenetic remodeling in B-cell acute lymphoblastic leukemia occurs in two tracks and employs embryonic stem cell-like signatures

Creator:: Lee, Seung-Tae, Muench, Marcus O., Fomin, Marina E., Xiao, Jianqiao, Zhou, Mi, de Smith, Adam, Martín-Subero, José I., Heath, Simon, Houseman, E. Andres, Roy, Ritu, Wrensch, Margaret, Wiencke, John, Metayer, Catherine, and Wiemels, Joseph L.
Abstract:: We investigated DNA methylomes of pediatric B-cell acute lymphoblastic leukemias (B-ALLs) using whole-genome bisulfite sequencing and high-definition microarrays, along with RNA expression profiles. Epigenetic alteration of B-ALLs occurred in two tracks: de novo methylation of small functional compartments and demethylation of large intercompartmental backbones. The deviations were exaggerated in lamina-associated...
Resource Type:: Article

Effects of ungulate herbivory on aspen, cottonwood, and willow development under forest fuels treatment regimes

Creator:: Endress, Bryan A., Wisdom, Michael J., Vavra, Martin, Parks, Catherine G., Dick, Brian L., Naylor, Bridgett J., and Boyd, Jennifer M.
Abstract:: Herbivory by domestic and wild ungulates can dramatically affect vegetation structure, composition and dynamics in nearly every terrestrial ecosystem of the world. These effects are of particular concern in forests of western North America, where intensive herbivory by native and domestic ungulates has the potential to substantially reduce or eliminate...
Resource Type:: Article
Full Text:: . Wisdomb, Martin Vavra b, Catherine G. Parks b, Brian L. Dick b, Bridgett J. Naylor b, Jennifer M. Boyd b

Comparative Composition, Diversity and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls

Creator:: Bernardino, Angelo F., Levin, Lisa A., Thurber, Andrew R., and Smith, Craig R.
Abstract:: Sediments associated with hydrothermal venting, methane seepage and large organic falls such as whale, wood and plant detritus create deep-sea networks of soft-sediment habitats fueled, at least in part, by the oxidation of reduced chemicals. Biological studies at deep-sea vents, seeps and organic falls have looked at macrofaunal taxa, but...
Resource Type:: Article
Full Text:: and Citation: Bernardino AF, Levin LA, Thurber AR, Smith CR (2012) Comparative Composition, Diversity

Roles of brca2 (fancd1) in Oocyte Nuclear Architecture, Gametogenesis, Gonad Tumors, and Genome Stability in Zebrafish

Creator:: Rodriguez-Mari, Adriana, Wilson, Catherine, Titus, Tom A., Canestro, Cristian, BreMiller, Ruth A., Yan, Yi-Lin, Nanda, Indrajit, Johnston, Adam, Kanki, John P., Gray, Erin M., He, Xinjun, Spitsbergen, Jan, Schindler, Detlev, and Postlethwait, John H.
Abstract:: Mild mutations in BRCA2 (FANCD1) cause Fanconi anemia (FA) when homozygous, while severe mutations cause common cancers including breast, ovarian, and prostate cancers when heterozygous. Here we report a zebrafish brca2 insertional mutant that shares phenotypes with human patients and identifies a novel brca2 function in oogenesis. Experiments showed that...
Resource Type:: Article
Full Text:: , Catherine Wilson1, Tom A. Titus1, Cristian Cañestro1¤, Ruth A. BreMiller1, Yi- Lin Yan1, Indrajit Nanda2

Global solutions to regional problems : collecting global expertise to address the problem of harmful cyanobacterial blooms. A Lake Erie case study

Creator:: Bullerjahn, George S., McKay, Robert M., Davis, Timothy W., Baker, David B., Boyer, Gregory L., D’Anglada, Lesley V., Doucette, Gregory J., Ho, Jeff C., Irwin, Elena G., Kling, Catherine L., Kudela, Raphael M., Kurmayer, Rainer, Michalak, Anna M., Ortiz, Joseph D., Otten, Timothy G., Paerl, Hans W., Qin, Boqiang, Sohngen, Brent L., Stumpf, Richard P., Visser, Petra M., and Wilhelm, Steven W.
Abstract:: In early August 2014, the municipality of Toledo, OH (USA) issued a ‘do not drink’ advisory on their water supply directly affecting over 400,000 residential customers and hundreds of businesses (Wilson, 2014). This order was attributable to levels of microcystin, a potent liver toxin, which rose to 2.5 μg L⁻¹...
Resource Type:: Article
Full Text:: , Catherine L. Kling j, Raphael M. Kudela k, Rainer Kurmayer l, Anna M. Michalak h, Joseph D. Ortizm, Timothy

In situ enrichment of ocean crust microbes on igneous minerals and glasses using an osmotic flow‐through device

Creator:: Smith, Amy, Popa, Radu, Fisk, Martin, Nielsen, Mark, Wheat, C. Geoffrey, Jannasch, Hans W., Fisher, Andrew T., Becker, Keir, Sievert, Stefan M., and Flores, Gilberto
Abstract:: The Integrated Ocean Drilling Program (IODP) Hole 1301A on the eastern flank of Juan de Fuca Ridge was used in the first long-term deployment of microbial enrichment flow cells using osmotically driven pumps in a subseafloor borehole. Three novel osmotically driven colonization systems with unidirectional flow were deployed in the...
Resource Type:: Article
Full Text:: minerals and glasses using an osmotic flow‐through device Amy Smith and Radu Popa Department of Biology

The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei

Creator:: Seiboth, Bernhard, Karimi, Razieh Aghcheh, Phatale, Pallavi A., Linke, Rita, Hartl, Lukas, Sauer, Dominik G., Smith, Kristina M., Baker, Scott E., Freitag, Michael, and Kubicek, Christian P.
Abstract:: Trichoderma reesei is an industrial producer of enzymes that degrade lignocellulosic polysaccharides to soluble monomers, which can be fermented to biofuels. Here we show that the expression of genes for lignocellulose degradation are controlled by the orthologous T. reesei protein methyltransferase LAE1. In a lae1 deletion mutant we observed a...
Resource Type:: Article
Full Text:: Karimi,1† Pallavi A. Phatale,2 Rita Linke,1,3 Lukas Hartl,1 Dominik G. Sauer,1 Kristina M. Smith,2

Herbicide Resistance: Toward an Understanding of Resistance Development and the Impact of Herbicide-Resistant Crops

Creator:: Vencill, William K., Nichols, Robert L., Webster, Theodore M., Soteres, John K., Mallory-Smith, Carol, Burgos, Nilda R., Johnson, William G., and McClelland, Marilyn R.
Abstract:: Development of herbicide-resistant crops has resulted in significant changes to agronomic practices, one of which is the adoption of effective, simple, low-risk, crop-production systems with less dependency on tillage and lower energy requirements. Overall, the changes have had a positive environmental effect by reducing soil erosion, the fuel use for...
Resource Type:: Article
Full Text:: . Webster, John K. Soteres, Carol Mallory-Smith, Nilda R. Burgos, William G. Johnson, and Marilyn R

ScholarsArchive@OSU

Soil Matters: Improving Forest Landscape Planning and Management for Diverse Objectives with Soils Information and Expertise

Rapid Quantification of Soilborne Pathogen Communities in Wheat-based Long-term Field Experiments

Epigenetic remodeling in B-cell acute lymphoblastic leukemia occurs in two tracks and employs embryonic stem cell-like signatures

Effects of ungulate herbivory on aspen, cottonwood, and willow development under forest fuels treatment regimes

Comparative Composition, Diversity and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls

Roles of brca2 (fancd1) in Oocyte Nuclear Architecture, Gametogenesis, Gonad Tumors, and Genome Stability in Zebrafish

Global solutions to regional problems : collecting global expertise to address the problem of harmful cyanobacterial blooms. A Lake Erie case study

In situ enrichment of ocean crust microbes on igneous minerals and glasses using an osmotic flow‐through device

The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei

Herbicide Resistance: Toward an Understanding of Resistance Development and the Impact of Herbicide-Resistant Crops

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