Index Catalog // ScholarsArchive@OSU

A broad-spectrum cloning vector that exists as both an integrated element and a free plasmid in Chlamydia trachomatis

Creator:: Garvin, Lotisha, Vande Voorde, Rebecca, Dickinson, Mary, Carrell, Steven, Hybiske, Kevin, and Rockey, Daniel
Abstract:: Plasmid transformation of chlamydiae has created new opportunities to investigate host–microbe interactions during chlamydial infections; however, there are still limitations. Plasmid transformation requires a replicon derived from the native Chlamydia plasmid, and these transformations are species-specific. We explored the utility of a broad host-range plasmid, pBBR1MCS-4, to transform chlamydiae, with...
Resource Type:: Article
Full Text:: GarvinID 1, Rebecca Vande Voorde1, Mary Dickinson2, Steven Carrell1, Kevin Hybiske2, Daniel RockeyID 1* 1

Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley

Creator:: Graebner, Ryan C., Wise, Mitchell, Cuesta-Marcos, Alfonso, Geniza, Matthew, Blake, Tom, Blake, Victoria C., Butler, Joshua, Chao, Shiaoman, Hole, David J., Horsley, Rich, Jaiswal, Pankaj, Obert, Don, Smith, Kevin P., Ullrich, Steven, and Hayes, Patrick M.
Abstract:: The Genome-Wide Association Studies approach was used to detect Quantitative Trait Loci associated with tocochromanol concentrations using a panel of 1,466 barley accessions. All major tocochromanol types- α-, β-, δ-, γ-tocopherol and tocotrienol- were assayed. We found 13 single nucleotide polymorphisms associated with the concentration of one or more of...
Resource Type:: Article
Full Text:: , Kevin P. Smith11, Steven Ullrich12, Patrick M. Hayes1* 1 Department of Crop and Soil Science, Oregon

Post-Breeding Season Migrations of a Top Predator, the Harbor Seal (Phoca vitulina richardii), from a Marine Protected Area in Alaska

Creator:: Womble, Jamie N. and Gende, Scott M.
Abstract:: Marine protected areas (MPAs) are increasingly being used as a conservation tool for highly mobile marine vertebrates and the focus is typically on protecting breeding areas where individuals are aggregated seasonally. Yet movements during the non-breeding season can overlap with threats that may be equally as important to population dynamics....
Resource Type:: Article
Full Text:: . Womble1,2*, Scott M. Gende2 1Department of Fisheries and Wildlife, Marine Mammal Institute, Oregon State

Host-Selective Toxins of Pyrenophora tritici-repentis Induce Common Responses Associated with Host Susceptibility

Creator:: Pandelova, Iovanna, Figueroa, Melania, Wilhelm, Larry J., Manning, Viola A., Mankaney, Aakash N., Mockler, Todd C., and Ciuffetti, Lynda M.
Abstract:: Pyrenophora tritici-repentis (Ptr), a necrotrophic fungus and the causal agent of tan spot of wheat, produces one or a combination of host-selective toxins (HSTs) necessary for disease development. The two most studied toxins produced by Ptr, Ptr ToxA (ToxA) and Ptr ToxB (ToxB), are proteins that cause necrotic or chlorotic...
Resource Type:: Article
Full Text:: Figueroa1,2, Larry J. Wilhelm1, Viola A. Manning1, Aakash N. Mankaney1, Todd C. Mockler1,3, Lynda M

Risk of Exposure to Eastern Equine Encephalomyelitis Virus Increases with the Density of Northern Cardinals

Creator:: Estep, Laura K., McClure, Christopher J. W., Vander Kelen, Patrick, Burkett-Cadena, Nathan D., Sickerman, Stephen, Hernandez, José, Jinright, Joseph, Hunt, Brenda, Lusk, John, Hoover, Victor, Armstrong, Keith, Stark, Lillian M., Hill, Geoffrey E., and Unnasch, Thomas R.
Abstract:: For a variety of infectious diseases, the richness of the community of potential host species has emerged as an important factor in pathogen transmission, whereby a higher richness of host species is associated with a lowered disease risk. The proposed mechanism driving this pattern is an increased likelihood in species-rich...
Resource Type:: Article
Full Text:: Jinright4, Brenda Hunt5, John Lusk5, Victor Hoover5, Keith Armstrong5, Lillian M. Stark6, Geoffrey E. Hill2

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

Creator:: Ohm, Robin A., Feau, Nicolas, Henrissat, Bernard, Schoch, Conrad L., Horwitz, Benjamin A., Barry, Kerrie W., Condon, Bradford J., Copeland, Alex C., Dhillon, Braham, Glaser, Fabian, Hesse, Cedar N., Kosti, Idit, LaButti, Kurt, Lindquist, Erika A., Lucas, Susan, Salamov, Asaf A., Bradshaw, Rosie E., Ciuffetti, Lynda, Hamelin, Richard C., Kema, Gert H. J., Lawrence, Christopher, Scott, James A., Spatafora, Joseph W., Turgeon, B. Gillian, de Wit, Pierre J. G. M., Zhong, Shaobin, Goodwin, Stephen B., and Grigoriev, Igor V.
Abstract:: Correction 5 Mar 2013: Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, et al. (2013) Correction: Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi. PLOS Pathogens 9(3): 10.1371/annotation/fcca88ac-d684-46e0-a483-62af67e777bd
Resource Type:: Article
Full Text:: , Pierre J. G. M. de Wit14, Shaobin Zhong15, Stephen B. Goodwin16, Igor V. Grigoriev1* 1 United States

Fish Misidentification and Potential Implications to Monitoring Within the San Francisco Estuary, California

Creator:: Kirsch, Joseph E., Day, Julie L., Peterson, James T., and Fullerton, David K.
Abstract:: Fish monitoring programs often rely on the collection, species identification, and counting of individual fish over time to inform natural resource management decisions. Thus, the utility of the data used to inform these decisions can be negatively affected by species misidentification. Fish species misidentification bias can be minimized by confirming...
Resource Type:: Article
Full Text:: barring (M); no markings such as spots, parr marks, mottling or barring (NM); local extirpation or federal

Ocean distribution of the American shad (Alosa sapidissima) along the Pacific coast of North America

Creator:: Pearcy, William G. and Fisher, Joseph P.
Abstract:: We examined the incidental catches of American shad (Alosa sapidissima) taken during research cruises and in commercial and recreational landings along the Pacific coast of North America during over 30 years of sampling. Shad, an introduced species, was mainly found over the shallow continental shelf, and largest catches and highest...
Resource Type:: Article
Full Text:: . Horn, eds.), p. 119–148. Univ. California Press, Berkeley, CA. Bailey, K. M., R. C. Francis, and P

An Online Database for Informing Ecological Network Models: http://kelpforest.ucsc.edu

Creator:: Beas-Luna, Rodrigo, Novak, Mark, Carr, Mark H., Tinker, Martin T., Black, August, Caselle, Jennifer E., Hoban, Michael, Malone, Dan, and Iles, Alison
Abstract:: Ecological network models and analyses are recognized as valuable tools for understanding the dynamics and resiliency of ecosystems, and for informing ecosystem-based approaches to management. However, few databases exist that can provide the life history, demographic and species interaction information necessary to parameterize ecological network models. Faced with the difficulty...
Resource Type:: Article
Full Text:: ://kelpforest.ucsc.edu Beas-Luna, R., Novak, M., Carr, M. H., Tinker, M. T., Black, A., et al. (2014) An Online

Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America

Creator:: Chestnut, Tara, Anderson, Chauncey, Popa, Radu, Blaustein, Andrew R., Voytek, Mary, Olson, Deanna H., and Kirshtein, Julie
Abstract:: Biodiversity losses are occurring worldwide due to a combination of stressors. For example, by one estimate, 40% of amphibian species are vulnerable to extinction, and disease is one threat to amphibian populations. The emerging infectious disease chytridiomycosis, caused by the aquatic fungus Batrachochytrium dendrobatidis (Bd), is a contributor to amphibian...
Resource Type:: Article
Full Text:: Chestnut T, Anderson C, Popa R, Blaustein AR, Voytek M, et al. (2014) Heterogeneous Occupancy and Density

ScholarsArchive@OSU

A broad-spectrum cloning vector that exists as both an integrated element and a free plasmid in Chlamydia trachomatis

Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley

Post-Breeding Season Migrations of a Top Predator, the Harbor Seal (Phoca vitulina richardii), from a Marine Protected Area in Alaska

Host-Selective Toxins of Pyrenophora tritici-repentis Induce Common Responses Associated with Host Susceptibility

Risk of Exposure to Eastern Equine Encephalomyelitis Virus Increases with the Density of Northern Cardinals

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

Fish Misidentification and Potential Implications to Monitoring Within the San Francisco Estuary, California

Ocean distribution of the American shad (Alosa sapidissima) along the Pacific coast of North America

An Online Database for Informing Ecological Network Models: http://kelpforest.ucsc.edu

Heterogeneous Occupancy and Density Estimates of the Pathogenic Fungus Batrachochytrium dendrobatidis in Waters of North America

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