We study a class M of cyclically presented groups that includes both finite and infinite groups and is defined by a certain combinatorial condition on the defining relations. This class includes many finite metacyclic generalized Fibonacci groups that have been previously identified in the literature. By analyzing their shift extensions...
PREMISE OF THE STUDY: Mosses, very diverse in modern ecosystems, are currently underrepresented in the fossil record. For the pre-Cenozoic, fossil mosses are known almost exclusively from compression fossils, while anatomical preservation, which is much more taxonomically informative, is rare. The Lower Cretaceous of Vancouver Island (British Columbia, Canada) hosts...
Arrays of hydrophones were deployed within the Bransfield Strait and Scotia Sea (Antarctic Peninsula region) from 2005 to 2009 to record ambient ocean sound at frequencies of up to 125 and 500 Hz. Icequakes, which are broadband, short duration signals derived from fracturing of large free-floating icebergs, are a prominent...
WaRSwap is a randomization algorithm that for the first time provides a practical network motif discovery method for large multi-layer networks, for example those that include transcription factors, microRNAs, and non-regulatory protein coding genes. The algorithm is applicable to systems with tens of thousands of genes, while accounting for critical...
Background: Recent mapping of eukaryotic transcriptomes and spliceomes using massively parallel RNA sequencing (RNA-seq) has revealed that the extent of alternative splicing has been considerably underestimated. Evidence also suggests that many pre-mRNAs undergo unproductive alternative splicing resulting in incorporation of in-frame premature termination codons (PTCs). The destinies and potential functions...
Retreating glaciers and the periglacial areas they vacate for organismal colonization produce a harsh environment of extreme radiation, nutrient limitations, and temperature oscillations. They provide a model system for studying mechanisms that drive establishment and early assembly of communities. Here, we synthesize more than twenty years of research at the...
Hepatocellular carcinoma (HCC) is one of the most lethal human cancers. The search for targeted treatments has been hampered by the lack of relevant animal models for the genetically diverse subsets of HCC, including the 20-40% of HCCs that are defined by activating mutations in the gene encoding β-catenin. To...
Debris flows have typically been viewed as two-phase mixtures of sediment and water, but in forested mountain landscapes, wood can represent a sizable fraction of total flow volume. The effects of this third phase on flow behavior are poorly understood. To evaluate whether wood can have a significant effect on...
Landscape fire succession models (LFSMs) predict spatially–explicit interactions between vegetation
succession and disturbance, but these models have yet to fully integrate ungulate herbivory as a driver of
their processes. We modified a complex LFSM, FireBGCv2, to include a multi-species herbivory module,
GrazeBGC. The system is novel in that it explicitly...
Stable surface adhesion of cells is one of the early pivotal steps in bacterial biofilm
formation, a prevalent adaptation strategy in response to changing environments. In Pseudomonas
fluorescens, this process is regulated by the Lap system and the second messenger cyclic-di-GMP.
High cytoplasmic levels of cyclic-di-GMP activate the transmembrane receptor...