Wireless networking equipment was installed on three research vessels and at three shore stations during the 1998 Thin Layers Experiment in East Sound, Washington. This wireless network provided high-speed data communication between scientists on separate vessels and permitted rapid transfer of data from vessels and from moored instruments to a...
Physical, optical, and acoustical data from Monterey Bay, California, USA, describing the distributions of phytoplankton, zooplankton, and small fish as well as gradients in the physical habitat were used to examine the interactions between vertically compressed plankton structures (thin layers), their consumers, and the local physical forces they experience. The...
The first seagoing test of a prototype laser/fiber-optic system for in situ detection of ocean chlorophyll fluorescence is described. Radiation at 488 nm originating from a shipboard argon laser was transmitted through 20 of 200-µm core optical fiber to the distal tip mounted on the microstructure profiler, the Rapid Sampling...
A new in situ fluorometer for the detection of oceanic photosynthetic pigment fluorescence is described.
Emission spectra from 546 to 733 nm are recorded for each of three different visible excitation bands ten
times a second. A Spectralon cell is used to improve the excitation coupling to and the collection...
As part of the U.S. Joint Global Ocean Flux Study Southern Ocean
program, high-resolution surveys of the Antarctic Polar Front near 170øW were
conducted during October-November 1997 with a towed undulating system equipped
with conductivity-temperature-depth and bio-optical sensors. Transects along
170°W and two successive mapping surveys revealed zonal bands with...
Variation in bacterial abundance and activity was assessed by sampling the upper 35 to 80 m of the water column during 2 to 5 d periods at 3 sites: eutrophic-mesotrophic midshelf, mesotrophic-oligotrophic slope, and oligotrophic gyre edge, off the Oregon coast in late summer 1997 and 1998. Bacterial abundances varied...
The spectral dependency of the particulate backscattering ratio is relevant in the fields of ocean color inversion, light field modeling, and inferring particle properties from optical measurements. Aside from theoretical predictions for spherical, homogeneous particles, we have very limited knowledge of the actual in situ spectral variability of the particulate...
The implementation and characterization of backscatter and forward-scatter fiber-optic fluorescence sensors attached to a microstructure profiling instrument are described. By using an optical multichannel array detector to record emission spectra, eight profiles per hour of chlorophyll fluorescence spectra at 2-cm intervals can be obtained throughout the upper 100 m of...
Calanus finmarchicus (Gunnerus) stratify narrowly near 500 m depth during their fifth copepodite resting phase in North Atlantic Slope Water off southern New England, USA. They probably achieve this by migration to a specific, daytime isolume. Photoperiod information provided by light intensity at depth could serve as a cure for...
We measured iron concentrations off the Oregon coast in spring (May–June) and summer (August) of 2001 as part of the Coastal Ocean Advances in Shelf Transport (COAST) program. Dissolvable and total dissolvable iron levels in surface waters were generally higher in spring (mean of 2.1 and 33.9 nmol L¯¹, respectively)...
The backscattering properties of marine phytoplankton, which are assumed to vary widely with differences in size, shape, morphology and internal structure, have been directly measured in the laboratory on a very limited basis. This work presents results from laboratory analysis of the backscattering properties of thirteen phytoplankton species from five...
High concentrations of chlorophyll are found in the California Current System over
300 km offshore, far from the productive coastal upwelling region, and between 150 and
250 m, well below the depth to which photosynthetically active solar radiation penetrates.
This exceptionally deep chlorophyll feature is formed near the coast and...
SeaWiFS estimates of surface chlorophyll concentrations are reported for the region of the U.S. JGOFS study in the Southern Ocean (∼ 170 °W, 60 °S). Elevated chlorophyll was observed at the Southern Ocean fronts, near the edge of the seasonal ice sheet, and above the Pacific Antarctic Ridge. The elevated...
Observations during the Coastal Transition Zone (CTZ) experiment in summer 1988 reveal the
presence of deep phytoplankton layers in a coastal upwelling system. The layers occur throughout the
CTZ study area, including a strong baroclinic jet which was present over the period of the experiment.
On the basis of a...
Satellite-derived data provide the temporal means and seasonal and nonseasonal
variability of four physical and biological parameters off Oregon and Washington
(41°–48.5°N). Eight years of data (1998–2005) are available for surface chlorophyll
concentrations, sea surface temperature (SST), and sea surface height, while six years of
data (2000–2005) are available for...
In summer 1988, we made repeated mesoscale surveys of a grid extending 200 km offshore between
37°N and 39°N in the coastal transition zone off northern California, obtaining continuous acoustic
Doppler current profiler data and conductivity-temperature-depth data at standard stations 25 km apart
on alongshore sections 40 km apart. All...
Physical and biological fields in the coastal transition zone off northern California were measured during February, March, May and June 1987 in an extended alongshore region between 60 km and 150 km offshore. The spring transition, as seen in coastal sea level and winds, occurred in mid-March. Surface variability during...
This is an author's peer-reviewed final manuscript, as accepted by the publisher. The published article is copyrighted by Inter-Research and can be found at: https://doi.org/10.3354/meps10835
Data from Geostationary Operational Environmental
Satellites are used to study the seasonal evolution of
temperature fronts in the northern California Current
System (CCS), focusing on the interactions with
topographic features. Fronts first appear close to the coast
in response to upwelling winds, moving offshore with the
continuous input of energy...
Sea surface temperature (SST) fronts are determined for the 2001–2004 time period
from Geostationary Operational Environmental Satellites (GOES) data in the California
Current System (CCS). The probability of detecting a SST front at an individual pixel
location in the CCS is presented as a bi-monthly climatology. Fronts clearly indicate the...
The chemical composition of the boles of 14 Douglas-fir trees growing in the central Willamette Valley of western Oregon was examined to determine whether differences in various chemical component levels might help to explain arthropod or microbial colonization patterns. Levels of nearly all cations as well as N and P...
Connections, sometimes tenuous, have previously been noted between stratospheric
Kelvin waves and several stratospheric trace constituents. The present study finds
evidence of Kelvin wave signatures in ozone from the Microwave Limb Sounder (MLS)
and Cryogenic Limb Array Etalon Spectrometer (CLAES) instruments aboard the Upper
Atmosphere Research Satellite. Predominant variations near...
Significant attention has been given to how artificial intelligence (AI) can be utilized by society and in scientific fields in recent years. This article explores how AI tools utilized in various fields have been and can be applied to ecological restoration projects, their affiliated benefits and drawbacks, and what those...
We compared canopy arthropod assemblages among overstory conifer and understory angiosperm
species at Teakettle Experimental Forest in the Sierra Nevada in California during 1998–2000. Arthropods were
sampled from upper, middle, and lower crown levels of one overstory tree of each of the four dominant conifer
species (Jeffrey pine, sugar pine,...
Rapid eruption of submarine lava flows during formation of the Caribbean plateau correlates closely with
ocean anoxic event 2 (OAE2), which bracketed the Cenomanian/Turonian boundary (~93.5 Ma). These events
also correspond with a positive excursion in carbon isotopic composition of seawater. Hydrothermal activity
associated with large-scale submarine volcanism may have...
Observations of water vapor with high temporal and spatial resolution and good horizontal coverage just above the tropical tropopause have been scarce, but a preliminary version of such data has been developed using radiance measurements of the Microwave Limb Sounder. These data reveal distinct variations with periods in the ranges...
The three-dimensional (3-D) structure of stratospheric Kelvin waves is revealed
using data from the Microwave Limb Sounder for the period July 1992 to April 1993. Four Kelvin wave modes are identified, two for zonal wave number 1 (k = 1) and two for k = 2, using extended empirical orthogonal...
Eliciting information from experts for use in constructing prior distributions for logistic regression coefficients can be challenging. The task is especially difficult when the model contains many predictor variables, because the expert is asked to provide summary information about the probability of “success” for many subgroups of the population. Often,...
We evaluated the two-year effects of variable-retention harvest on chipmunk (Tamias spp.) abundance (Nˆ ) and habitat in mature coniferous forests in western Oregon and Washington because wildlife responses to density/pattern of retained trees remain largely unknown. In a randomized complete-block design, six treatments were applied to 13-ha units at...
Tidal mixing over a slope was explored using moored time series observations on Kaena Ridge extending northwest from Oahu, Hawaii, during the Survey component of the Hawaii Ocean Mixing Experiment (HOME). A mooring was instrumented to sample the velocity and density field of the lower 500 m of the water...
Reading through this issue of Oceanography, it will become
apparent that researchers in different disciplines see their
seamounts in quite different ways. The term seamount has been
defined many times (e.g., Menard, 1964; Wessel, 2001; Schmidt and
Schmincke, 2000; Pitcher et al., 2007; International Hydrographic
Organization, 2008; Wessel et al.,...
Vegetation at the aquatic–terrestrial interface can alter landscape features through its growth and interactions with sediment and fluids. Even similar species may impart different effects due to variation in their interactions and feedbacks with the environment. Consequently, replacement of one engineering species by another can cause significant change in the...
We investigated the movements and selection of settlement sites of translocated pygmy rabbits (Brachylagus idahoensis) in southeastern Oregon from June to December 2008. We captured, radio tagged, and translocated 59 pygmy rabbits across big sagebrush (Artemisia tridentata ssp.) habitat with 3 categories of landscape fragmentation. We used radio telemetry to...
We show the signature of the tropical intraseasonal oscillation (TIO) in upper tropospheric moisture and dynamical fields, roughly between 200 and 100 hPa. Relationships among these fields are examined using lag-correlation analysis and using multivariate extended empirical orthogonal functions (MEEOFs), which maximize the shared explained variance among several fields for...
There is an increasing interest in estimating biomass for longleaf pine (Pinus palustris Mill.), an important tree species in the southeastern U.S. Most of the individual-tree allometric models available for the species are local, relying on stem diameter outside bark at breast height (DBH) and total tree height (HT), but...
Closely spaced vertical profiles through the bottom boundary layer over a sloping continental shelf during relaxation from coastal upwelling reveal structure that is consistent with convectively driven mixing. Parcels of fluid were observed adjacent to the bottom that were warm (by several millikelvin) relative to fluid immediately above. On average,...
Conductivity‐temperature‐depth surveys during 1988 encountered strong baroclinic jets that were evident in acoustic Doppler current profiler and hydrographic data. During June and July 1988 a filament with high surface nitrate, high chlorophyll, abundant populations of neritic centric diatoms, and higher rates of primary production was evident perpendicular to the coast...
A study was done to determine the macro- and micronutrient requirements of young northern highbush blueberry plants (Vaccinium corymbosum L. ‘Bluecrop’) during the first 2 years of establishment and to examine how these requirements were affected by the amount of nitrogen (N) fertilizer applied. The plants were spaced 1.2 ×...
In the Pacific Northwest (PNW), concern about the impacts of climate and land cover change on water resources and flood-generating processes emphasizes the need for a mechanistic understanding of the interactions between forest canopies and hydrologic processes. Detailed measurements during the 1999 and 2000 hydrologic years were used to modify...
Citizen science is a growing phenomenon across many branches of environmental science facilitating both increased science literacy and the collection of highly rigorous, longitudinal data. Understanding the motivations of adults to join and remain active in citizen science programs is important as the diversity and abundance of opportunities for public...
The effects of nitrogen (N) fertilizer application on plant growth, N uptake, and biomass and N allocation in highbush blueberry (Vaccinium corymbosum L. 'Bluecrop') were determined during the first 2 years of field establishment. Plants were either grown without N fertilizer after planting (0N) or were fertilized with 50, 100,...
The infrequent occurrence of large wildfires in the southern Appalachian Mountains over the last several decades has offered few opportunities to study their impacts. From 2000 to 2008, five wildfires burned a large portion of the area in and surrounding the Linville Gorge Wilderness in North Carolina. Areas were burned...
In many business sectors today, focus on quality as a competitive tool is being replaced by a focus on innovation. Research exploring connections between quality management, innovation, and company performance suggests that quality is ‘necessary but insufficient’ in business today. In short, managers need to know how to adapt their...
One of the biggest challenges when conducting a national-scale assessment of lakes, such as the 2007 US National Lake Assessment (NLA), is finding enough reference lakes to set appropriate expectations for the assessed sites. In the NLA, a random design was used to select lakes for sampling to make unbiased...
Air passing upward through the tropical tropopause is “marked” by an annually varying water vapor mixing ratio much as a tape recorder marks a magnetic tape; as the air ascends in the tropical stratosphere, these marks are effaced by a combination of vertical diffusion within the tropics and dilution of...
Near the bottom, the velocity profile in the bottom boundary layer over the continental
shelf exhibits a characteristic law-of-the-wall that is consistent with local estimates of
friction velocity from near-bottom turbulence measurements. Farther from the bottom, the
velocity profile exhibits a deviation from the law-of-the-wall. Here the velocity gradient
continues...
Koi herpesvirus (KHV) is highly pathogenic to Cyprinus carpio. KHV can also become latent in recovered fish and reactivate from latency under stressful conditions. Understanding KHV latency is important for development of strategies against herpesvirus latent infection. Our previous studies found KHV ORF6 mRNA is detectable during latent infection. In...
Rebuilding of some U.S. West Coast rockfish (Sebastes spp.) stocks relies heavily on mandatory fishery discard, however the long-term condition of discarded fish experiencing capture-related barotrauma is unknown. We conducted two studies designed to evaluate delayed mortality, physical condition,and behavioral competency of yelloweye rockfish, Sebastes ruberrimus, experiencing barotrauma during capture...
The ecological consequences of widespread fisheries-induced reductions of large pelagic predators are not fully understood. Tropical tunas are considered a main component of apex predator guilds that include sharks and billfishes, and thus may seem unsusceptible to secondary effects of fishing top predators. However, intra-guild predation can occur because of...
Pacific red lionfish Pterois volitans have invaded Atlantic reefs and reached much greater population densities than on native reefs. We hypothesized that lionfish on invaded reefs would (1) experience higher kill rates and thus spend less time hunting, given the naïveté of Atlantic prey, (2) consume a greater variety of...