Index Catalog // ScholarsArchive@OSU

Uncertainties in, and interpretation of, carbon flux estimates using the eddy covariance technique

Creator:: Loescher, H. W., Law, B. E., Mahrt, Larry, Hollinger, D. Y., Campbell, J., and Wofsy, S. C.
Abstract:: Whole ecosystem carbon dioxide (CO₂) exchange estimated with the eddy covariance (EC) technique has been central to studies on the responses of terrestrial ecosystems to disturbance and intra‐annual and interannual variations in climate, but challenges exist in understanding and reducing the uncertainty in estimates of net ecosystem exchange (NEE) of...
Resource Type:: Article
Full Text:: with the eddy covariance (EC) technique has been central to studies on the responses of terrestrial

The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes

Creator:: Goss, Erica M., Tabima, Javier F., Cooke, David E. L., Restrepo, Silvia, Fry, William E., Forbes, Gregory A., Fieland, Valerie J., Cardenas, Martha, and Grünwald, Niklaus J.
Abstract:: Phytophthora infestans is a destructive plant pathogen best known for causing the disease that triggered the Irish potato famine and remains the most costly potato pathogen to manage worldwide. Identification of P. infestan’s elusive center of origin is critical to understanding the mechanisms of repeated global emergence of this pathogen....
Resource Type:: Article
Full Text:: in the Andes sample (US-1, EC-1, PE-3, and PE-7) and one another and the Mexico sample (Fig. 3). EC-1

Maize Metabolic Network Construction and Transcriptome Analysis

Creator:: Monaco, Marcela K., Sen, Taner Z., Dharmawardhana, Palitha D., Ren, Liya, Schaeffer, Mary, Naithani, Sushma, Amarasinghe, Vindhya, Thomason, Jim, Harper, Lisa, Gardiner, Jack, Cannon, Ethalinda K.S., Lawrence, Carolyn J., Ware, Doreen, and Jaiswal, Pankaj
Abstract:: A framework for understanding the synthesis and catalysis of metabolites and other biochemicals by proteins is crucial for unraveling the physiology of cells. To create such a framework for Zea mays L. subsp. mays (maize), we developed MaizeCyc, a metabolic network of enzyme catalysts, proteins, carbohydrates, lipids, amino acids, secondary...
Resource Type:: Article
Full Text:: @science.oregonstate.edu). Abbreviations: 16DAP, 16 d after pollination; CoA, coenzyme A; EC, Enzyme Commission; FGS, fi

Epidemic Clostridium difficile Ribotype 027 in Chile

Creator:: Hernandez-Rocha, Cristian, Barra-Carrasco, Jonathan, Pizarro-Guajardo, Marjorie, Ibanez, Patricio, Bueno, Susan M., Sarker, Mahfuzur R., Maria Guzman, Ana, Alvarez-Lobos, Manuel, and Paredes-Sabja, Daniel
Abstract:: The increased severity of Clostridium difficile infection is primarily attributed to the appearance of an epidemic strain characterized as PCR ribotype 027. The only report that identified epidemic C. difficile ribotype 027 in an American country outside of North America comes from Costa Rica, raising the possibility that strains 027...
Resource Type:: Article
Full Text:: /1471-2180-11-86 6. Fedorko DP, Williams EC. Use of cy- closerine-cefoxitin-fructose agar and L

Using SIMD and SIMT vectorization to evaluate sparse chemical kinetic Jacobian matrices and thermochemical source terms

Creator:: Curtis, Nicholas J., Niemeyer, Kyle E., and Sung, Chih-Jen
Abstract:: Accurately predicting key combustion phenomena in reactive-flow simulations, e.g., lean blow-out, extinction/ignition limits and pollutant formation, necessitates the use of detailed chemical kinetics. The large size and high levels of numerical stiffness typically present in chemical kinetic models relevant to transportation/power-generation applications make the efficient evaluation/factorization of the chemical kinetic...
Resource Type:: Article
Full Text:: ; this filtered form of Eq. (13) is denoted EC,k. Finally, the Frobenius norm is calculated over all the

Toward Sustainable Cultivation of Pinus occidentalis Swartz in Haiti: Effects of Alternative Growing Media and Containers on Seedling Growth and Foliar Chemistry

Creator:: Hubbel, Kyrstan L., Ross-Davis, Amy L., Pinto, Jeremiah R., Burney, Owen T., and Davis, Anthony S.
Abstract:: Haiti has suffered great losses from deforestation, with little forest cover remaining today. Current reforestation efforts focus on seedling quantity rather than quality. This study examined limitations to the production of high-quality seedlings of the endemic Hispaniolan pine (Pinus occidentalis Swartz). Recognizing the importance of applying sustainable development principles to...
Resource Type:: Article
Full Text:: , K, Ca, Mg, and Na), pH, and electrical conductivity (EC) at the beginning and end of the growing

VitisCyc: a metabolic pathway knowledgebase for grapevine (Vitis vinifera)

Creator:: Naithani, Sushma, Raja, Rajani, Waddell, Elijah N., Elser, Justin, Gouthu, Satyanarayana, Deluc, Laurent G., and Jaiswal, Pankaj
Abstract:: We have developed VitisCyc, a grapevine-specific metabolic pathway database that allows researchers to (i) search and browse the database for its various components such as metabolic pathways, reactions, compounds, genes and proteins, (ii) compare grapevine metabolic networks with other publicly available plant metabolic networks, and (iii) upload, visualize and analyze...
Resource Type:: Article
Full Text:: or gene ID, Enzyme Commission (EC) number and Gene Ontology (GO) assignments. The optional attributes

Seasonal hydrology explains interannual and seasonal variation in carbon and water exchange in a semiarid mature ponderosa pine forest in central Oregon

Creator:: Thomas, Christoph, Law, Beverly E., Irvine, James, Martin, Jonathan, Pettijohn, J. Cory, and Davis, Kent J.
Abstract:: We analyzed 7 years (2002–2008) of micrometeorological and concurrent biological observations of carbon and water fluxes at a mature ponderosa pine forest in central Oregon in a semiarid climate. We sought to evaluate the extent that gross primary productivity, net ecosystem exchange, ecosystem respiration, net primary productivity, net ecosystem productivity,...
Resource Type:: Article
Full Text:: (2006 onward) at 33 m agl on the main meteorological tower using the eddy covariance (EC) technique. In

A tad too high: Sensitivity to UV-B radiation may limit invasion potential of American bullfrogs (Lithobates catesbeianus) in the Pacific Northwest invasion range

Creator:: Garcia, Tiffany S., Rowe, Jennifer C., and Doyle, James B.
Abstract:: Biological invasion potential can be strongly influenced by abiotic factors such as temperature, water availability, and solar radiation. Invasive species that possess phenotypically plastic traits can mediate impacts from these stressors, but may be unable to recognize and respond to dangerous levels in a novel environment. Understanding potential constraints on...
Resource Type:: Article
Full Text:: , Springer Press, pp 63–79, http://dx.doi.org/10.1007/ 978-1-4757-3486-7_3 Bomford M, Kraus F, Barry SC

Comparative genomics explains the evolutionary success of reef-forming corals

Creator:: Bhattacharya, Debashish, Agrawal, Shobhit, Aranda, Manuel, Baumgarten, Sebastian, Belcaid, Mahdi, Drake, Jeana L., Erwin, Douglas, Foret, Sylvian, Gates, Ruth D., Gruber, David F., Kamel, Bishoy, Lesser, Michael P., Levy, Oren, Liew, Yi Jin, MacManes, Matthew, Mass, Tali, Medina, Monica, Mehr, Shaadi, Meyer, Eli, Price, Dana C., Putnam, Hollie M., Qiu, Huan, Shinzato, Chuya, Shoguchi, Eiichi, Stokes, Alexander J., Tambutté, Sylvie, Tchernov, Dan, Voolstra, Christian R., Wagner, Nicole, Walker, Charles W., Weber, Andreas P. M., Weis, Virginia M., Zelzion, Ehud, Zoccola, Didier, and Falkowski, Paul G.
Abstract:: Transcriptome and genome data from twenty stony coral species and a selection of reference bilaterians were studied to elucidate coral evolutionary history. We identified genes that encode the proteins responsible for the precipitation and aggregation of the aragonite skeleton on which the organisms live, and revealed a network of environmental...
Resource Type:: Article
Full Text:: a N em at os te lla v ec te ns is H yd ra m ag na pa pi lla ta A cr op or a m

ScholarsArchive@OSU

Uncertainties in, and interpretation of, carbon flux estimates using the eddy covariance technique

The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes

Maize Metabolic Network Construction and Transcriptome Analysis

Epidemic Clostridium difficile Ribotype 027 in Chile

Using SIMD and SIMT vectorization to evaluate sparse chemical kinetic Jacobian matrices and thermochemical source terms

Toward Sustainable Cultivation of Pinus occidentalis Swartz in Haiti: Effects of Alternative Growing Media and Containers on Seedling Growth and Foliar Chemistry

VitisCyc: a metabolic pathway knowledgebase for grapevine (Vitis vinifera)

Seasonal hydrology explains interannual and seasonal variation in carbon and water exchange in a semiarid mature ponderosa pine forest in central Oregon

A tad too high: Sensitivity to UV-B radiation may limit invasion potential of American bullfrogs (Lithobates catesbeianus) in the Pacific Northwest invasion range

Comparative genomics explains the evolutionary success of reef-forming corals

Limit your search

Academic Affiliation

Creator

Date

Decade

Language

License

Non-Academic Affiliation

Peer Reviewed

Resource Type

Rights Statement

Search Constraints

Search Results

Limit your search