The U.S. Culture Collection Network was formed in 2012 by a group of culture collection scientists and stakeholders in order to continue the progress established previously through efforts of an ad hoc group. The network is supported by a Research Coordination Network grant from the U.S. National Science Foundation (NSF)...
The infection biology of Mycobacterium avium subsp. paratuberculosis has recently crystallized, with added details surrounding intestinal invasion. The involvement of pathogen-derived effector proteins such as the major membrane protein, oxidoreductase, and fibronectin attachment proteins have been uncovered. Mutations constructed in this pathogen have also shed light on genes needed for...
Quality concerns drive many water studies and practices, but obtaining samples from water bodies over time and space for quality determination is often difficult and expensive. We present a low-cost approach that allows integration of water samples over timescales of days to months to allow more widely distributed acquisition of...
Solutions to the Boussinesq equation describing drainage into a fully penetrating channel have been used for aquifer characterization. Two analytical solutions exist for early- and late-time drainage from a saturated, homogeneous, and horizontal aquifer following instantaneous drawdown. The solutions for discharge Q can be expressed as dQ/dt = −aQ [superscript...
The method of recession analysis proposed by Brutsaert and Nieber (1977) remains one of the few analytical tools for estimating aquifer hydraulic parameters at the field scale and beyond. In the method, the recession hydrograph is examined as −dQ/dt = f(Q), where Q is aquifer discharge and f is an...
A gene's duplication relaxes selection. Loss of duplicate, low-function DNA (fractionation) sometimes follows, mostly by deletion in plants, but mostly via the pseudogene pathway in fish and other clades with smaller population sizes. Subfunctionalization — the founding term of the Xfunctionalization lexicon — while not the general cause of differences...
BACKGROUND: Exocytosis is integral to root growth: trafficking components of systems that control growth (e.g., PIN
auxin transport proteins) to the plasma membrane, and secreting materials that expand the cell wall to the
apoplast. Spatiotemporal regulation of exocytosis in eukaryotes often involves the exocyst, an octameric complex
that tethers selected...
Red alder (Alnus rubra), a nitrogen(N)-fixing deciduous broadleaf tree, can strongly influence N
concentrations in western Oregon and Washington. We compiled a database of stream N and GIS-derived landscape
characteristics in order to examine geographic variation in N across the Oregon Coast Range. Basal area
of alder, expressed as a...
Observed changes in climate of the U.S. Pacific Northwest since the early twentieth century were examined
using four different datasets. Annual mean temperature increased by approximately 0.6°–0.8°C from 1901 to
2012, with corroborating indicators including a lengthened freeze-free season, increased temperature of the
coldest night of the year, and increased...
This study examines productivity change in the Mid-Atlantic surfclam and ocean quahog fishery, which has been managed since 1990 using Individual Transferable Ouotas (ITQ). Productivity change is estimated through a Malmquist index from 1981-2008, capturing change before and after implementation of the quota system. We then decompose the index to...