The combined activities of diverse heterotrophic marine microorganisms significantly shape global biogeochemical cycles, but models of these activities are currently limited to aggregate microbial community processes, and it remains unclear how community structure and the functional roles of specific microbial taxa should be integrated into these models. Therefore, understanding the...
The inverse electron demand Diels Alder reaction between tetrazines and strained alkenes is an exceptionally useful tool in functionalizing to biomolecules since it is orthogonal to the chemistry of most living systems and have exceptionally high rate constants. In particular reactions between strained trans-cyclooctenes (sTCO) and tetrazines can achieve second...
Biotic and abiotic processes at continent-ocean interfaces cycle a disproportionate mass of carbon and nutrients relative to their global surface area, and microbial activity is a principal determinant of organic and inorganic matter flux in these transition zones. Most studies using modern high-throughput ‘omics techniques to link microorganisms with costal...
Lilacs are a group of ornamental trees and shrubs in the Oleaceae family consisting of 22 to 30 species. There are six series within genus Syringa: Pubescentes, Villosae, Ligustrae, Ligustrina, Pinnatifoliae, and Syringa. Fertility and cross-compatibility among cultivars, species, and series have yet to be formally investigated. Over three years,...
The buildup of reactive oxygen species (ROS) and reactive nitrogen and oxygen species (RNS) is known as oxidative stress. Oxidative stress results in a wide variety of modification to biological macromolecules including nucleic acids, lipids, and proteins. For at least 30 years it has been known that high levels of...
Immobilized proteins are integral components of a number of important technologies, including the principal component of many biosensors, as functional coatings in various implants, as catalysts is industrial biosynthesis, and as the building blocks of next-generation nanotechnologies. Despite their ubiquity, relatively little is known about the processes that shape immobilized...
Major psychotic disorders are one of the leading causes of disability worldwide, having severe impacts on the people who suffer from the conditions, their families and society. There is evidence that if these conditions are identified and treated early, the prognosis is improved. The purpose of this dissertation study is...
Vibrio bacteria are commonly found in freshwater, marine, and estuarine environments. Members of this genus can exist in commensal relationships with marine animals or as planktonic bacteria, however, they are well known for their roles as pathogens towards humans and animals. In this dissertation, I investigated aspects of host-bacteria relationships...
Seagrasses and coral reefs play important roles in nutrient cycling, coastal protection, and maintaining marine biodiversity. However, these coastal marine organisms are declining globally due to anthropogenic stressors, such as rising ocean temperatures, ocean acidification, and eutrophication. These organisms live in close association with their microbiomes, which can be beneficial...
In biology, function and disease are closely intertwined, requiring the coordination of hundreds of intricate chemical reactions. Interdisciplinary cooperation between chemical and biological approaches is necessary to decipher the chemical links between physiological and pathological conditions. In this arena, the precision tools made possible with chemical biology can manipulate and...
The present investigation was designed to test two major hypotheses
and five sub-hypotheses. The two major hypotheses were:
(1) Parental models influence the shaping of children's responses to
frustration, and (2) There is a positive relation between parental
consistency in responses to frustration and children's imitation of
parental responses. Three...
Hibiscus and lilacs (Syringa spp.) are economically important nursery crops in the US that accounted for 4.5 million units ($30 million) and 2 million units ($20 million), respectively (USDA, 2016). To maintain and expand the market share of ornamental plants such as lilacs and Hibiscus, novel performance, floral ornamental value,...
In this dissertation, we use Fourier-analytic methods to study questions of equidistribution on the compact abelian group Zp of p-adic integers. In particu- lar, we prove a LeVeque-type Fourier analytic upper bound on the discrepancy of sequences. We establish p-adic analogues of the classical Dirichlet and Fejér kernels on R/Z,...
Improvements in instrumentation for fluorometric kinetic
measurements and the application of a new intensified diode array (IDA)
rapid scanning system to low level transient fluorescence measurements
are reported. This instrumentation is applied to a new fluorometric
kinetic method for thiamine (TM).
Modifications to the existing fluorometric reation rate instrument
include...
A series of in vitro laboratory trials and in vivo
sheep digestion trials were used to evaluate aerobically
or anaerobically fermented perennial ryegrass straw.
The laboratory trials consisted of a silage study, where
mini-silos were used in a 9 X 2 factorial design with
nine levels of whey (0 to...
If P is an integer polynomial denote the degree of P by ∂(P) and let H(P) be the maximum of the absolute value of the coefficients of P. Define Λ(P)=2[superscript ∂(P)]H(P) and for a fixed prime p let C[subscript p] denote the completion of the algebraic closure of the p-adic...
Three highly purified forms of cytochrome P-450 (P-450a, P-450b, P-450c) from Aroclor 1254-induced rat hepatic microsomes catalyzed the monooxygenation of 1-(2- chloroethyl)-3-(trans-4-methylcyclohexyl)-1-nitrosourea (MeCCNU) and 1-(2-chloroethyl)-3-(cyclohexyl)-1-nitrosourea (CCNU) in the presence of purified NADPH cytochrome P-450 reductase, NADPH and oxygen. Cytochrome P -450- dependent monooxygenation of CCNU gave six alicyclic hydroxylation products...
Kernel hardness (KHA) is a major factor determining break flour yield (BFY) and end-use quality of common wheat (Triticum aestivum L.). Within the soft wheat class, genotypes with consistently softer grains than common soft wheat are considered to be 'extra-soft'. In addition, 'extra-soft' wheats have greater BFY than common soft...
Following European-American colonization of North America and associated landscape changes, barred owls (Strix varia) underwent a dramatic expansion of their historical range. The barred owl expanded across the previously tree-less Great Plains that had limited their distribution, and into the forests along the west coast. In these western forests they...
Oxo-hydroxo Group 5 metal clusters are an untapped resource to study and advance aqueous solution processing of metal oxide thin films. The tetramethylammonium (TMA) hexatantalate salt (TMA6[H2Ta6O19]) yields dense Ta2O5 films (~95% of the bulk ß-Ta2O5 density) with atomically smooth surfaces (<4 Å root mean square surface roughness). This same...
Analysis of alternative concepts has a significant impact on design project outcomes, and yet many design teams fail to consider a significantly broad range of conceptual solutions. Within the realm of conceptual design exists a technique called design by analogy (DBA) -- the practice of reapplying old solutions to new...
This thesis details my investigation of some pharmaceuticals and natural products on the transport of drugs which are substrates of P-glycoprotein (P-gp), such as cyclosporin A (CSA) and digoxin by using Caco-2 and MDCKII-MDR1 drug transport models. Three objectives were performed to address this goal. The first objective was to...
The function of a protein is defined by its three-dimensional structure, and in understanding the three-dimensional structure of a protein, we gain an understanding of its function and mechanism. Protein structures, especially at high resolution, can provide detailed insights into many elements of enzyme function and catalysis – identifying residues...
Managers of forest and plantation ecosystems are encountering growing problems involving plant pathogens and the expanding geographic ranges of these pathogens. Historically unexposed stands are exceptionally vulnerable when a non-native pathogen is introduced because these pathogens can cause devastating disease in a host population that lacks co-evolved resistance mechanisms. One...
Implementation climate is the most proximal organizational predictor of implementation success. First-level supervisors are in a pivotal position to influence implementation climate, as they directly oversee frontline staff who deliver evidence-based interventions (EBIs). First-level supervisors who exhibit strong leadership and utilize best practices in supervision may be able to establish...
Toxin production by cyanobacterial harmful algal blooms (cyanoHABs) in freshwater systems has lasting ecological and human impacts. Nutrients, light availability, hydrology, and microbial community composition impact the frequency and intensity of toxic cyanoHABs. Climate change will exacerbate toxic cyanoHABs, making real time and predictive monitoring a vital tool for managing...
The three essays in this dissertation progressively answer the following questions: (a) How important are constraints? (b) Who benefits from removing constraints? (c) When does a constraint for a single market predominantly affect closely related markets? These questions are applied in the context of time, weather, and minimum wage constraints,...
Vertisols and other vertic-intergrade soils are found all over the globe, including many agricultural and urban areas. These soils are characterized by their cyclical shrinking and swelling behaviors, where bulk density and porosity distribution both vary as functions of time and/or soil moisture. In turn, alterations in physical soil parameters...
Small broomrape (Orobanche minor) is a parasitic weed that attaches to the roots of red clover (Trifolium pratense). Small broomrape invasion presents a significant threat to the future of red clover seed production in Oregon. This study was conducted to investigate and develop small broomrape management options for red clover...
The topics in this dissertation center on the snow processes that dominate mountain environments in the Western U.S. and Alaska, particularly in locations lacking long-term observational datasets or locales that are difficult to access in-person. Some are currently glacierized or have been glaciated in the recent past. Each of the...
This work investigates the effect of cation substitution on the properties of the lead-free, solid solution (Na₀.₅Bi₀.₅)TiO₃-BaTiO₃ (NBT-BT). Substitution into NBT-BT increases disorder and increases the relaxor ferroelectric properties. These relaxor ferroelectric materials show large piezoelectric strains that can be utilized in actuator applications. Ceramic samples were prepared using standard...
The work presented in this dissertation highlights the various techniques available to characterize the increasingly complex surfaces of engineered biomaterials. The methods used range from the simple measurement of a contact angle with a smartphone to a complex synchrotron technique like near edge x-ray absorption fine structure (NEXAFS) spectroscopy to...
The modern world has presented many threats to the health and stability of ecosystems worldwide. One of the most biodiverse ecosystems, coral reefs, faces particularly strong pressures, and is already declining rapidly in complexity and area. Although the stressors that affect reefs are diverse, ranging from nutrient pollution to overfishing,...
X-ray computed tomography is a noninvasive imaging modality capable of reconstructing exact density values of 3D objects. Computed tomography machines are deployed across the world to provide doctors with an image that reveals more detail than a standard x-ray image. We investigate algorithms based on exact computed tomography reconstruction formulas...
Intact sagebrush communities in the Great Basin are rapidly disappearing due
to invasion of non-native plants, large wildfires, and encroachment of pinyon pine
and juniper woodlands. Land management options include the use of prescribed
fire, grazing, herbicides and mechanical treatments to reduce the potential for
wildfire and restore plant communities....
Metal oxide clusters are promising inorganic photoresists in next generation nanomanufacturing because of their potential for high-resolution and low line-edge roughness patterning, and exceptional sensitivity to extreme ultraviolet (EUV) radiation. In EUV patterning, absorption of EUV radiation leads to electron emission that serve as a primary species for driving radiation...
The current appeal of reality television is undeniable, with the specific genre of makeover television having special nationalistic and moral appeal in the United States. Previous analyses of NBC's weight-loss makeover show The Biggest Loser suggest that the program is inherently problematic because of its ingrained fat bias and unethical...
Chromosome complements of ten species of shorebirds, order
Charadriiformes, were analyzed and compared. Mitotic chromosomes
from the pigeon guillemot (Cepphus columba), Heermann's gull (Larus
heermanni), the California gull (L. californicus), the western gull
(L. occidentalis), the American avocet (Recurvirostra americana),
the western willet (Catoptrophorus semipalmatus), Wilson's snipe
(Capella gallinago), the...
Since the 1890s, American federalism has been perceived as being unique in the world by having two different levels of government operating within the same jurisdiction without influencing one another. Modern scholars call into question the validity of this basic assumption, but few have published quantitative evidence to reject its...
Current oil production technologies recover only about one‐third to one‐half of the oil
originally present in an oil reservoir. Given current oil prices, even a modest increase in oil recovery efficiency is fiscally attractive. One novel approach to increase oil recovery
efficiency is a process called microbial enhanced oil recovery...
Historical concepts of Clavicipitaceae have included a broad range of species that display diverse morphologies, ecological modes and host associations. When subjected to multigene phylogenetic investigation of evolutionary history, the family was found to be polyphyletic, largely driven by diversity in the genus Cordyceps, previously containing over 400 taxa. The...
The cultivated potato (Solanum tuberosum L.) is one of the world’s most important staple crops, ranked fourth after maize, rice, and wheat. While the potato’s success is due largely to its high yield, it also benefits from its broad global acceptance, and its ability to be used by the consumer...
Methodologies that detect biologically active substances have important potential applications for medical diagnostics, drug discovery, and chemical and biological anti-terrorism efforts. The wide spectrum of potential analytes that induce a physiological response dictates that novel techniques be developed to more rapidly screen and characterize agents that are more economical and...
NCRP report No.160 states that medical exposure increased to nearly half of the total radiation exposure of the U.S. population from all sources in 2006 (NCRP 2009). Part of this increase in exposure is due to the rise in nuclear medicine procedures. With this observed growth in medical radionuclide usage,...
We present a novel multi-objective optimization methodology built upon a multi-agent blackboard framework. This multi-agent blackboard system (MABS) synthesizes blackboard architectures, multi-agent environments, and optimization theory. The blackboard architecture creates the framework for initializing, storing, and solving a multi-objective optimization problem. Multiple agents allow for an optimization problem to be...