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MellbyeSteadyStateGrowthSupp2.xls

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Full Text:: " >NE0056 mutY 0.06 1.53 0.0000345597 0.38 1.24 0.0000157166 0.35 -1.23 77026 78160 77027 78160 A/G-specific

MellbyeSteadyStateGrowthSupp1.pdf

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Full Text:: @science.oregonstate.edu, and Luis A. Sayavedra-Soto, sayavedl@science.oregonstate.edu. This PDF file

MellbyeSteadyStateGrowth.pdf

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Full Text:: Address correspondence to Brett L. Mellbye, mellbyeb@science.oregonstate.edu, or Luis A. Sayavedra-Soto

Steady-State Growth under Inorganic Carbon Limitation Conditions Increases Energy Consumption for Maintenance and Enhances Nitrous Oxide Production in Nitrosomonas europaea

Creator:: Mellbye, Brett L., Giguere, Andrew, Chaplen, Frank, Bottomley, Peter J., and Sayavedra-Soto, Luis A.
Abstract:: Nitrosomonas europaea is a chemolithoautotrophic bacterium that oxidizes ammonia (NH₃) to obtain energy for growth on carbon dioxide (CO₂) and can also produce nitrous oxide (N₂O), a greenhouse gas. We interrogated the growth, physiological, and transcriptome responses of N. europaea to conditions of replete (>5.2 mM) and limited inorganic carbon...
Resource Type:: Article

Thauera butanivorans sp. nov., a C₂–C₉ alkane-oxidizing bacterium previously referred to as ‘Pseudomonas butanovora’

Creator:: Dubbels, Bradley L., Sayavedra-Soto, Luis A., Bottomley, Peter J., and Arp, Daniel J.
Abstract:: The placement of ‘Pseudomonas butanovora’ in the genus Thauera was proposed previously, based on 16S rRNA gene sequence analysis, upon further studies of taxonomical characteristics. In this study, physiological characteristics and DNA–DNA reassociation data are presented and the transfer of ‘P. butanovora’ to the genus Thauera is proposed. The original...
Resource Type:: Article
Full Text:: bacterium previously referred to as ‘Pseudomonas butanovora’ Bradley L. Dubbels,1 Luis A. Sayavedra-Soto,1

Effect of moisture, temperature, and sulfur dioxide on color of dried apples

Creator:: Sayavedra-Soto, Luis Alberto
Abstract:: When sulfur dioxide is used in commercial drying of fruits in combination with low storage temperatures, browning and microbial spoilage can be inhibited. However, the relationship between moisture level, storage temperature, and sulfur dioxide content on the color of dried fruit is not known; therefore the purpose of this research...
Resource Type:: Masters Thesis
Full Text:: , Temperature, and Sulfur Dioxide on Color of Dried Apples by Luis Alberto Sayavedra-Soto A THESIS

Inhibition of polyphenol oxidase by sulfur dioxide

Creator:: Sayavedra-Soto, Luis Alberto
Abstract:: Inhibition of polyphenol oxidase (PPO) by sulfur dioxide (SO₂) was studied using three different sources of PPO (banana, mushroom, and pear). Several methods to detect PPO activity were tested due to SO₂, interference in some of the assays. The method using 2-nitro-5-thiobenzoic acid (TNB) to react with the quinones was...
Resource Type:: Dissertation
Full Text:: Alberto Sayavedra Soto A THESIS submitted to Oregon State University in partial fulfillment of

Use of aliphatic n-alkynes to discriminate soil nitrification activities of ammonia-oxidizing thaumarchaea and bacteria

Creator:: Taylor, Anne E., Vajrala, Neeraja, Giguere, Andrew T., Gitelman, Alix I., Arp, Daniel J., Myrold, David D., Sayavedra-Soto, Luis, and Bottomley, Peter J.
Abstract:: Ammonia (NH₃)-oxidizing bacteria (AOB) and thaumarchaea (AOA) co-occupy most soils, yet no short-term growth-independent method exists to determine their relative contributions to nitrification in situ. Microbial monooxygenases differ in their vulnerability to inactivation by aliphatic n-alkynes, and we found that NH₃ oxidation by the marine thaumarchaeon Nitrosopumilus maritimus was unaffected...
Resource Type:: Article
Full Text:: . Regala, V. Lao, M. Land, L. Hauser, A. Hooper, M. Klotz, J. Norton, L. Sayavedra-Soto, D. Arciero, N

Quantitative trait locus analysis of agronomic and malting quality traits in the Harrington x Morex barley (Hordeum vulgare L.) mapping population

Creator:: Marquez-Cedillo, Luis A.
Abstract:: Characterization of the determinants of economically important phenotypes showing complex inheritance should lead to more effective use of genetic resources. This study was conducted to determine the number, genome location and effects of QTLs determining malting quality and agronomic traits in the two North American barley quality standards. Using a...
Resource Type:: Dissertation
Full Text:: THE THESIS OF Luis A. Marguez-Cedillo for the degree of Doctor of Philosophy in Crop Science

The role of sulfur in the preservation of isoprenoid hydrocarbons in sedimentary materials of the Washington continental margin

Creator:: Pinto Alvarez, Luis A.
Abstract:: A systematic study of highly branched isoprenoids (HBI) was carried out in suspended particulate material (SPM) and Washington coastal sediments to determine their origin and fate. SPM collected at 10 m depth was filtered through Nitex membranes. C₂₅ HBI were found only in the 1.2-40 μm range over the shelf....
Resource Type:: Dissertation
Full Text:: Continental Margin. Abstract approved: Fredrick G. Prahi A systematic study of highly branched isoprenoids

ScholarsArchive@OSU

MellbyeSteadyStateGrowthSupp2.xls

MellbyeSteadyStateGrowthSupp1.pdf

MellbyeSteadyStateGrowth.pdf

Steady-State Growth under Inorganic Carbon Limitation Conditions Increases Energy Consumption for Maintenance and Enhances Nitrous Oxide Production in Nitrosomonas europaea

Thauera butanivorans sp. nov., a C₂–C₉ alkane-oxidizing bacterium previously referred to as ‘Pseudomonas butanovora’

Effect of moisture, temperature, and sulfur dioxide on color of dried apples

Inhibition of polyphenol oxidase by sulfur dioxide

Use of aliphatic n-alkynes to discriminate soil nitrification activities of ammonia-oxidizing thaumarchaea and bacteria

Quantitative trait locus analysis of agronomic and malting quality traits in the Harrington x Morex barley (Hordeum vulgare L.) mapping population

The role of sulfur in the preservation of isoprenoid hydrocarbons in sedimentary materials of the Washington continental margin

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