Index Catalog // ScholarsArchive@OSU

Kinetic characterization of the soluble butane monooxygenase from Thauera butanivorans, formerly ‘Pseudomonas butanovora’

Creator:: Cooley, Richard B., Dubbels, Bradley L., Sayavedra-Soto, Luis A., Bottomley, Peter J., and Arp, Daniel J.
Abstract:: Soluble butane monooxygenase (sBMO), a three-component di-iron monooxygenase complex expressed by the C2–C9 alkane-utilizing bacterium Thauera butanivorans, was kinetically characterized by measuring substrate specificities for C1–C5 alkanes and product inhibition profiles. sBMO has high sequence homology with soluble methane monooxygenase (sMMO) and shares a similar substrate range, including gaseous and...
Resource Type:: Article
Full Text:: . Dubbels,2 Luis A. Sayavedra-Soto,2 Peter J. Bottomley3 and Daniel J. Arp2 Correspondence Daniel J. Arp

Lehtovirta-MorleyIdentifyingPotentialMechanismsSupplement.pdf

Creator:: Lehtovirta-Morley, Laura E., Sayavedra-Soto, Luis A., Gallois, Nicolas, Schouten, Stefan, Stein, Lisa Y., Prosser, James I., and Nicol, Graeme W.
Abstract:: Ammonia oxidation is the first and rate-limiting step in nitrification and is dominated by two distinct groups of microorganisms in soil: ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). AOA are often more abundant than AOB and dominate activity in acid soils. The mechanism of ammonia oxidation under acidic conditions has...
Full Text:: . devanaterra’ and other AOA. A. Tetranucleotide word frequency principal component analysis of AOA genomes

Lehtovirta-MorleyIdentifyingPotentialMechanisms.pdf

Creator:: Lehtovirta-Morley, Laura E., Sayavedra-Soto, Luis A., Gallois, Nicolas, Schouten, Stefan, Stein, Lisa Y., Prosser, James I., and Nicol, Graeme W.
Abstract:: Ammonia oxidation is the first and rate-limiting step in nitrification and is dominated by two distinct groups of microorganisms in soil: ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). AOA are often more abundant than AOB and dominate activity in acid soils. The mechanism of ammonia oxidation under acidic conditions has...
Full Text:: . Lehtovirta-Morley,a Luis A. Sayavedra-Soto,b Nicolas Gallois,c Stefan Schouten,d Lisa Y. Stein,e James I

Identifying Potential Mechanisms Enabling Acidophily in the Ammonia-Oxidizing Archaeon "Candidatus Nitrosotalea devanaterra"

Creator:: Lehtovirta-Morley, Laura E., Sayavedra-Soto, Luis A., Gallois, Nicolas, Schouten, Stefan, Stein, Lisa Y., Prosser, James I., and Nicol, Graeme W.
Abstract:: Ammonia oxidation is the first and rate-limiting step in nitrification and is dominated by two distinct groups of microorganisms in soil: ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). AOA are often more abundant than AOB and dominate activity in acid soils. The mechanism of ammonia oxidation under acidic conditions has...
Resource Type:: Article

Ca. Nitrososphaera and Bradyrhizobium are inversely correlated and related to agricultural practices in long-term field experiments

Creator:: Zhalnina, Kateryna, de Quadros, Patricia D., Gano, Kelsey A., Davis-Richardson, Austin, Fagen, Jennie R., Brown, Christopher T., Giongo, Adriana, Drew, Jennifer C., Sayavedra-Soto, Luis A., Arp, Daniel J., Camargo, Flavio A. O., Daroub, Samira H., Clark, Ian M., McGrath, Steve P., Hirsch, Penny R., and Triplett, Eric W.
Abstract:: Agricultural land management, such as fertilization, liming, and tillage affects soil properties, including pH, organic matter content, nitrification rates, and the microbial community. Three different study sites were used to identify microorganisms that correlate with agricultural land use and to determine which factors regulate the relative abundance of the microbial...
Resource Type:: Article
Full Text:: . Brown1, Adriana Giongo1, Jennifer C. Drew 1, Luis A. Sayavedra-Soto 3, Dan J. Arp3, Flavio A. O. Camargo

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

Creator:: Bollmann, Annette, Sedlacek, Christopher J., Norton, Jeanette, Laanbroek, Hendrikus J., Suwa, Yuichi, Stein, Lisa Y., Klotz, Martin G., Arp, Daniel J., Sayavedra-Soto, Luis, Lu, Megan, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, James, Woyke, Tanja, Pitluck, Sam, Pennacchio, Len, Nolan, Matt, Land, Miriam L., Huntemann, Marcel, Deshpande, Shweta, Han, Cliff, Chen, Amy, Kyrpides, Nikos, Movromatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivonova, Natalia, Mikhailova, Natalia, Pagani, Ioanna, Pati, Amrita, Peters, Lin, Ovchinnikova, Galina, Goodwin, Lynne A., and Lucas, Susan M.
Abstract:: Nitrosomonas sp. Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family Nitrosomonadaceae within the phylum Proteobacteria. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production of nitrate. Nitrosomonas sp. Is79 is an ammonia oxidizer of high...
Resource Type:: Article
Full Text:: Acids Res 2012; 40:D571. PubMed http://dx.doi.org/10.1093/nar/gkr1100 37. Arp D, Sayavedra-Soto L

From Perception to Planning : Adaptation in Flood-risk Communities

Creator:: Gomez, Luis A.
Abstract:: This research asserts that flood risk perception of individuals living in floodplains influences their preparedness for taking actions to protect themselves from flood hazards. The results of this research are backed up by quantitative analysis of survey responses of individuals living in floodplains of Corvallis, OR in the USA. The...
Resource Type:: Dissertation
Full Text:: responses of individuals living in floodplains of Corvallis, OR in the USA. The results confirm a

Mitochondrial decay in the aging rat heart : changes in fatty acid-supported bioenergetics and macromolecular organization of the electron transport system

Creator:: Gómez Ramirez, Luis A.
Abstract:: Decline in cardiac pump function is a hallmark of aging where mitochondrial decay is an important underlying cause. Although certainly multifactorial in nature, both dysfunction of the machinery involved in the chemiosmotic process of energy transduction and lower capacity to maintain fatty acid-driven respiration are identified as intrinsic factors of...
Resource Type:: Dissertation
Full Text:: AN ABSTRACT OF THE DISSERTATION OF Luis A. Gómez for the degree of Doctor of Philosophy in

Spirituality in Medicine: The Physician’s Perspective

Creator:: Soto, Tiffany A.
Abstract:: Many public opinion surveys indicate that patients desire an open dialogue on spirituality/religion with their physicians. What role does spirituality play in the physician/patient relationship and in what contexts do these conversations arise? What do physicians think about the appropriateness of such discussions? Because the role of spirituality in clinical...
Resource Type:: Honors College Thesis
Full Text:: AN ABSTRACT OF THE THESIS OF Tiffany A. Soto for the

CoteManagementIncidentallyDetectedSupportingInfo.pdf

Creator:: Côté, Etienne, Edwards, N. Joel, Ettinger, Stephen J., Luis Fuentes, Virginia, MacDonald, Kristin A., Scansen, Brian A., Sisson, D. David, and Abbott, Jonathan A.
Abstract:: A dog or a cat has an incidentally detected heart murmur if the murmur is an unexpected discovery during a veterinary consultation that was not initially focused on the cardiovascular system. This document presents approaches for managing dogs and cats that have incidentally-detected heart murmurs, with an emphasis on murmur...
Full Text:: HEART MURMURS IN DOGS AND CATS A heart murmur is an abnormal sound made by the beating heart

ScholarsArchive@OSU

Kinetic characterization of the soluble butane monooxygenase from Thauera butanivorans, formerly ‘Pseudomonas butanovora’

Lehtovirta-MorleyIdentifyingPotentialMechanismsSupplement.pdf

Lehtovirta-MorleyIdentifyingPotentialMechanisms.pdf

Identifying Potential Mechanisms Enabling Acidophily in the Ammonia-Oxidizing Archaeon "Candidatus Nitrosotalea devanaterra"

Ca. Nitrososphaera and Bradyrhizobium are inversely correlated and related to agricultural practices in long-term field experiments

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

From Perception to Planning : Adaptation in Flood-risk Communities

Mitochondrial decay in the aging rat heart : changes in fatty acid-supported bioenergetics and macromolecular organization of the electron transport system

Spirituality in Medicine: The Physician’s Perspective

CoteManagementIncidentallyDetectedSupportingInfo.pdf

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