Index Catalog // ScholarsArchive@OSU

Effects of forest roads and tree removal in or near wetlands of the Pacific Northwest : a literature synthesis

Creator:: Adamus, Paul R.
Abstract:: Because studies of forestry effects on wetlands have been so infrequent in the Pacific Northwest, each section in this report drew heavily from studies of forestry impacts to streams and riparian zones. After assembly and synthesis, that information was extrapolated, mostly in the form of hypotheses, to the very different...
Resource Type:: Technical Report
Full Text:: Monitoring, Evaluation and Research (CMER) committee as a participant in the program. The FPB empowered CMER

Mineral and mineral water analyses : soils and agricultural survey

Creator:: Oregon Agricultural Experiment Station, Shaw, G. W. (George Wright), 1864-, and Lotz, Dumont
Abstract:: Published October 1891. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report

Invertebrates (except family Carabidae) caught by pitfall and refuge trap sampling in Linn Co March 2018-June 2019

Creator:: Reich, Inga, Jessie, Casi, Gormally, Mike, and McDonnell, Rory
Abstract:: Numbers of invertebrates (except family Carabidae) collected from pitfall and refuge traps in ten Annual Ryegrass fields in Linn County, Oregon between March 23, 2018 and June 20, 2019. Given are details on sampling date, site and trap ID, trap type, taxonomy (at least order level) and life stage.
Resource Type:: Dataset

Pitfall and refuge trap sampling Linn Co March 2018-June2019

Creator:: Reich, Inga, Jessie, Casi, Ahn, Seung-Joon, Choi, Man-Yeon, Williams, Christopher, Gormally, Mike, and Mc Donnell, Rory
Abstract:: Numbers of carabid beetles, caterpillars, cranefly larvae and slugs collected from pitfall and refuge traps in ten Annual Ryegrass fields in Linn County, Oregon between March 23, 2018 and June 20, 2019. Given are details on sampling date, trap, size and sex (carabids only), weight (slugs only) and species (where...
Resource Type:: Dataset

Supplemental data to "Estimating the Genetic Diversity of Pacific salmon and trout using Multi-gene eDNA Metabarcoding"

Creator:: Weitemier, Kevin A.
Abstract:: This dataset contains DNA sequence data of Oncorhynchus species, isolated from environmental DNA (eDNA) from Pacific Northwest streams via microfluidic eDNA metabarcoding and high-throughput (Ilummina) sequencing (samples collected from 2017-09-22 to 2017-10-10). It is accompanied by scripts and commands for data analyses including: sequence denoising, calculation of entropy values by...
Resource Type:: Dataset

Supplemental data to "Casting a broader net: Using microfluidic metagenomics to capture aquatic biodiversity data from diverse taxonomic targets"

Creator:: Hauck, Laura L., Weitemier, Kevin A., Penaluna, Brooke E., Garcia, Tiffany, and Cronn, Richard
Abstract:: This dataset contains the taxonomic classifications of environmental DNA (eDNA) sequences obtained from Fall Creek, Oregon, via microfluidic multiplex PCR (Fluidigm Access Array) and high-throughput sequencing. It is accompanied by electrofishing counts taken at the same time as the eDNA samples. Metadata and R scripts are provided to analyze the...
Resource Type:: Dataset

Oregon Greater Sage-Grouse Spring Population Monitoring: 2016 Annual Report

Creator:: Foster, Lee
Abstract:: During the 2016 greater sage-grouse breeding season, 1,908 aerial and ground lek surveys were conducted at 768 individual lek sites comprising 501 lek complexes. Surveys were conducted at 66.0% of known lek sites in the state, which was the greatest proportion of leks ever surveyed in Oregon. Survey effort during...
Resource Type:: Technical Report
Full Text:: Oregon Greater Sage-Grouse Spring Population Monitoring

Oregon Greater Sage-Grouse Population Monitoring: 2017 Annual Report

Creator:: Foster, Lee
Abstract:: During the 2017 greater sage-grouse (Centrocercus urophasianus) breeding season, 1,580 aerial and ground lek surveys were conducted at 674 individual lek sites comprising 429 lek complexes. Surveys were conducted at 58.0% of known lek sites in the state. Survey effort during 2017 declined -17.1%, -12.2%, and 14.5% from 2016 levels,...
Resource Type:: Technical Report
Full Text:: Oregon Greater Sage-Grouse Population Monitoring: 2017

Choosing Sampling Interval Durations for Remotely Classifying Rocky Mountain Elk Behavior

Creator:: Gaylord, Adam J., Sanchez, Dana M., and Van Sickle, John
Abstract:: Dual-axis accelerometer global positioning system collars can be used to remotely record the activity level and behavior of free-ranging animals, but inter- and intraspecific variations in motion among behaviors necessitate calibration for each species of interest. To date, little work has been done to determine the best duration for sampling...
Resource Type:: Article
Full Text:: untitled Notes Choosing Sampling Interval Durations for

Dataset for Status of the European Green Crab, Carcinus maenas, in Oregon and Washington coastal Estuaries in 2019

Creator:: Yamada, Sylvia Behrens, Schooler, Shon, Heller, Renee, Donaldson, Luke, Takacs, Graham T., Randall, Andrea, and Buffington, Chelsey
Abstract:: European green crab, Carcinus maenas, trapped and collected in coastal Oregon and Washington coastal estuaries during the 2019. Data for individual crabs include: estuary, site, date of collection, sex, carapace width, weight, molt stage (color of abdomen), missing limbs, estimated year class, method of collection, and name of collector.
Resource Type:: Dataset

Fish Misidentification and Potential Implications to Monitoring Within the San Francisco Estuary, California

Creator:: Kirsch, Joseph E., Day, Julie L., Peterson, James T., and Fullerton, David K.
Abstract:: Fish monitoring programs often rely on the collection, species identification, and counting of individual fish over time to inform natural resource management decisions. Thus, the utility of the data used to inform these decisions can be negatively affected by species misidentification. Fish species misidentification bias can be minimized by confirming...
Resource Type:: Article
Full Text:: Implications to Monitoring Within the San Francisco Estuary, California Joseph E. Kirsch,* Julie L. Day, James

The Willamette Valley (Oregon) Prairie Plant Trait Dataset

Creator:: Clark, Deborah and Wilson, Mark V.
Abstract:: The Willamette Valley (Oregon) Prairie Plant Trait Dataset is a compilation of plant traits of species important in upland prairies, wetland prairies, vernal pools, and emergent wetlands, and in the restoration of prairies and wetlands of the Willamette Valley of Oregon. These species are also found widely throughout the Pacific...
Resource Type:: Dataset

Designing a Monitoring Program to Estimate Estuarine Survival of Anadromous Salmon Smolts: Simulating the Effect of Sample Design on Inference

Creator:: Romer, Jeremy D., Gitelman, Alix I., Clements, Shaun, and Schreck, Carl B.
Abstract:: A number of researchers have attempted to estimate salmonid smolt survival during outmigration through an estuary. However, it is currently unclear how the design of such studies influences the accuracy and precision of survival estimates. In this simulation study we consider four patterns of smolt survival probability in the estuary,...
Resource Type:: Article

RomerJeremyFishWildlifeDesigningMonitoringProgram.pdf

Creator:: Romer, Jeremy D., Gitelman, Alix I., Clements, Shaun, and Schreck, Carl B.
Abstract:: A number of researchers have attempted to estimate salmonid smolt survival during outmigration through an estuary. However, it is currently unclear how the design of such studies influences the accuracy and precision of survival estimates. In this simulation study we consider four patterns of smolt survival probability in the estuary,...
Full Text:: Designing a Monitoring Program to Estimate

RomerJeremyFishWildlifeDesigningMonitoringProgramSupportingInformationTextS1.pdf

Creator:: Romer, Jeremy D., Gitelman, Alix I., Clements, Shaun, and Schreck, Carl B.
Abstract:: A number of researchers have attempted to estimate salmonid smolt survival during outmigration through an estuary. However, it is currently unclear how the design of such studies influences the accuracy and precision of survival estimates. In this simulation study we consider four patterns of smolt survival probability in the estuary,...
Full Text:: ) ######################################################################## # # PEAK sampling scheme

RomerJeremyFishWildlifeDesigningMonitoringProgramSupportingInformationFigureS1.pdf

Creator:: Romer, Jeremy D., Gitelman, Alix I., Clements, Shaun, and Schreck, Carl B.
Abstract:: A number of researchers have attempted to estimate salmonid smolt survival during outmigration through an estuary. However, it is currently unclear how the design of such studies influences the accuracy and precision of survival estimates. In this simulation study we consider four patterns of smolt survival probability in the estuary,...

Policy for Resource Management Plan Effectiveness Monitoring for Renewable Resources with Additional Guidance for Plans Implementing the Greater Sage-Grouse Conservation Strategy

Creator:: United States. Bureau of Land Management, United States. Forest Service, and Ellis, Steven A.
Abstract:: This Instruction Memorandum (Instruction Memorandum No. 2016-139) provides guidance on the use of terrestrial and aquatic objectives and quantitative data to determine Resource Management Plan effectiveness. Additionally, for RMPs that include Greater Sage-Grouse (GRSG) habitat, this IM provides guidance for tracking and reporting on the implementation of decisions using the...
Resource Type:: Technical Report
Full Text:: identifies monitoring indicators, acceptable thresholds of departure from potential natural conditions

Molecular genetic characterization of Chinook salmon (Oncorhynchus tschawytscha) runs for California’s central valley

Creator:: Banks, Michael A.
Abstract:: The application of DNA based markers towards the task of discriminating among alternate salmon runs has evolved in accord with ongoing genomic developments and increasingly enabled resolution of which genetic markers associate with important life history differences. Accurate and efficient identification of the most likely origin for salmon encountered during...
Resource Type:: Dataset

PONE_Fig4_data.xlsx

Creator:: Demchenko, Natalia L., Chapman, John W., Durkina, Valentina B, and Fadeev, Valeriy I.
Abstract:: Ampelisca eschrichtii are among the most important prey of the Western North Pacific gray whales, Eschrichtius robustus. The largest and densest known populations of this amphipod occur in the gray whale’s Offshore feeding area on the Northeastern Sakhalin Island Shelf. The remote location, ice cover and stormy weather at the...

PONE_Fig3_data.xlsx

Creator:: Demchenko, Natalia L., Chapman, John W., Durkina, Valentina B, and Fadeev, Valeriy I.
Abstract:: Ampelisca eschrichtii are among the most important prey of the Western North Pacific gray whales, Eschrichtius robustus. The largest and densest known populations of this amphipod occur in the gray whale’s Offshore feeding area on the Northeastern Sakhalin Island Shelf. The remote location, ice cover and stormy weather at the...

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