Index Catalog // ScholarsArchive@OSU

Creator:: Reichman, Jay R. and Vize, Peter D.
Abstract:: Here we document introns in two Symbiodinium clades that were most likely gained following divergence of this genus from other peridinin-containing dinoflagellate lineages. Soluble peridinin-chlorophyll a-proteins (sPCP) occur in short and long forms in different species. Duplication and fusion of short sPCP genes produced long sPCP genes. All short and...
Full Text:: Radiation of Symbiodinium (Dinophyceae) Clade A and B Lineages Reichman, J. R., Vize, P. D. (2014

Creator:: Ayres, H. B. (Horace Beemer), b. 1856 and Ashe, W. W. (William Willard), 1872-1932
Full Text:: DEPARTMENT OF THE INTERIOR UNITED STATES GEOLOGICAL SURVEY CHARLES D WALCOTT, DIREcToR THE BY H. B. AYRES

Creator:: Falke, Jeffrey A., Dunham, Jason B., Jordan, Christopher E., McNyset, Kristina M., and Reeves, Gordon H.
Abstract:: Processes that influence habitat selection in landscapes involve the interaction of habitat composition and configuration and are particularly important for species with complex life cycles. We assessed the relative influence of landscape spatial processes and local habitat characteristics on patterns in the distribution and abundance of spawning steelhead (Oncorhynchus mykiss),...
Full Text:: . McNyset1, Gordon H. Reeves4 1 Department of Fisheries and Wildlife, Oregon State University, Corvallis

Creator:: McDonnell, T. C., Sloat, M. R., Sullivan, T. J., and et al.
Abstract:: Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
Full Text:: Diminish Coldwater Habitat in Southern Appalachian Mountain Streams McDonnell, T. C., Sloat, M. R

Creator:: Oregon Agricultural College. Experiment Station, Tartar, H. V. (Herman Vance), 1882-, and Reimer, F. C. (Frank Charles), b. 1881
Full Text:: . IRVINE PortlandHON. N. R. MOORE CorvallisHON. H. S. WOODCOCK Coevollis STATION STAFF W. F. KERR, D. Sc

Creator:: Banks, Michael A., Blouin, Michael S., Moyer, Gregory R., Theriault, Veronique, Whitcomb, Amelia, Loomis, David, and Jackson, Laura S.
Abstract:: Data, pedigrees, reports and manuscripts herein are from an investigation conducted with coho salmon of the Umpqua River in southern Oregon from 2001-2009. They relate to a study investigating several areas of uncertainty about the use of salmon hatcheries to increase the abundance of wild populations. At that time, there...
Full Text:: . Edited from published abstract. For peer-review see attached below: Moyer, G. R., M. S. Blouin, and

Creator:: Banks, Michael A., Blouin, Michael S., Moyer, Gregory R., Theriault, Veronique, Whitcomb, Amelia, Loomis, David, and Jackson, Laura S.
Abstract:: Data, pedigrees, reports and manuscripts herein are from an investigation conducted with coho salmon of the Umpqua River in southern Oregon from 2001-2009. They relate to a study investigating several areas of uncertainty about the use of salmon hatcheries to increase the abundance of wild populations. At that time, there...
Full Text:: were sampled for genetic analysis GENOTYPER Individual responsible for DNA extraction H OR W W

Creator:: Wallace, Zachary P., Kennedy, Patricia L., Squires, John R., Oakleaf, Robert J., Olson, Lucretia E., and Dugger, Katie M.
Abstract:: Grassland and shrubland birds are declining globally due in part to anthropogenic habitat modification. Because population performance of these species is also influenced by non-anthropogenic factors, it is important to incorporate all relevant ecological drivers into demographic models. We used design-based sampling and occupancy models to test relationships of environmental...
Full Text:: Factors Zachary P. Wallace1,2¤*, Patricia L. Kennedy1,2, John R. Squires3, Robert J. Oakleaf4, Lucretia E

Creator:: Creason, Allison L., Vandeputte, Olivier M., Savory, Elizabeth A., Davis, Edward W., II, Putnam, Melodie L., Hu, Erdong, Swader-Hines, David, Mol, Adeline, Baucher, Marie, Prinsen, Els, Zdanowska, Magdalena, Givan, Scott A., El Jaziri, Mondher, Loper, Joyce E., Mahmud, Taifo, and Chang, Jeff H.
Abstract:: Members of Gram-positive Actinobacteria cause economically important diseases to plants. Within the Rhodococcus genus, some members can cause growth deformities and persist as pathogens on a wide range of host plants. The current model predicts that phytopathogenic isolates require a cluster of three loci present on a linear plasmid, with...
Resource Type:: Article
Full Text:: R h o d o co cc u s d ra ft g e n o m e as se m b lie s. Is o la te * P a th o g e

Creator:: Seguin, Jonathan, Rajeswaran, Rajendran, Malpica-López, Nachelli, Martin, Robert R., Kasschau, Kristin, Dolja, Valerian V., Otten, Patricia, Farinelli, Laurent, and Pooggin, Mikhail M.
Abstract:: Virus-infected plants accumulate abundant, 21–24 nucleotide viral siRNAs which are generated by the evolutionary conserved RNA interference (RNAi) machinery that regulates gene expression and defends against invasive nucleic acids. Here we show that, similar to RNA viruses, the entire genome sequences of DNA viruses are densely covered with siRNAs in...
Full Text:: . Li H, Durbin R (2009) Fast and accurate long-read alignment with Burrows- Wheeler transform

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