Index Catalog // ScholarsArchive@OSU

From fossils to phylogenies

Creator:: Goodwin, Baylee N., Besser, August D., and Ramsey, Stephen A.
Abstract:: The research question address in this study is, “To what extent will the use of hands-on activities for introducing concepts in bioinformatics promote student engagement in after-school STEM club settings?” It is hypothesized that high school students' engagement in hands-on bioinformatics activities promotes their awareness of, and interest in, STEM...
Resource Type:: Learning Object and Presentation
Full Text:: ” ➢ “Molecular Phylogenetics of Mastodon and Tyrannosaurus Rex” ➢ “Biomolecular Characterization and Protein

Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm

Creator:: Verde, Ignazio, Bassil, Nahla, Scalabrin, Simone, Gilmore, Barbara, Lawley, Cynthia T., Gasic, Ksenija, Micheletti, Diego, Rosyara, Umesh R., Cattonaro, Federica, Vendramin, Elisa, Main, Dorrie, Aramini, Valeria, Blas, Andrea L., Mockler, Todd C., Bryant, Douglas W., Wilhelm, Larry, Troggio, Michela, Sosinski, Bryon, Jose Aranzana, Maria, Arus, Pere, Iezzoni, Amy, Morgante, Michele, and Peace, Cameron
Abstract:: Correction 21 Jun 2012: Verde I, Bassil N, Scalabrin S, Gilmore B, Lawley CT, et al. (2012) Correction: Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm. PLOS ONE 7(6): 10.1371/annotation/33f1ba92-c304-4757-91aa-555de64a0768.
Resource Type:: Article

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

Creator:: Schroeder, Hilke, Cronn, Richard, Yanbaev, Yulai, Jennings, Tara, Mader, Malte, Degen, Bernd, and Kersten, Birgit
Abstract:: To detect and avoid illegal logging of valuable tree species, identification methods for the origin of timber are necessary. We used next-generation sequencing to identify chloroplast genome regions that differentiate the origin of white oaks from the three continents; Asia, Europe, and North America. By using the chloroplast genome of...
Resource Type:: Article
Full Text:: Development of Molecular Markers for Determining Continental

Cuesta-MarcosAlfonsoCropSoilScienceUSDABarleyCore.pdf

Creator:: Muñoz-Amatriaín, Maria, Cuesta-Marcos, Alfonso, Endelman, Jeffrey B., Hayes, Patrick M., and et al.
Abstract:: New sources of genetic diversity must be incorporated into plant breeding programs if they are to continue increasing grain yield and quality, and tolerance to abiotic and biotic stresses. Germplasm collections provide a source of genetic and phenotypic diversity, but characterization of these resources is required to increase their utility...
Full Text:: materials is inversely related to the degree of adaptation, advances in genomics and molecular breeding

Differences in Adélie Penguin (Pygoscelis adeliae) Chick Growth Rates and Diet

Creator:: Jennings, Scott, Varsani, Arvind, Dugger, Katie M., Ballard, Grant, and Ainley, David G.
Abstract:: Sexually size-dimorphic species must show some difference between the sexes in growth rate and/or length of growing period. Such differences in growth parameters can cause the sexes to be impacted by environmental variability in different ways, and understanding these differences allows a better understanding of patterns in productivity between individuals...
Resource Type:: Article
Full Text:: and female Adélie Penguin (Pygoscelis adeliae) chicks during two breeding seasons at Cape Crozier

RobyDanielFisheriesWildlifeForagingResponsesBlack-Legged.pdf

Creator:: Paredes, Rosana, Orben, Rachael A., Suryan, Robert M., Irons, David B., Roby, Daniel D., Harding, Ann M. A., Young, Rebecca C., Benoit-Bird, Kelly J., Ladd, Carol, Renner, Heather, Heppell, Scott, Phillips, Richard A., and Kitaysky, Alexander
Abstract:: We hypothesized that changes in southeastern Bering Sea foraging conditions for black-legged kittiwakes (Rissa tridactyla) have caused shifts in habitat use with direct implications for population trends. To test this, we compared at-sea distribution, breeding performance, and nutritional stress of kittiwakes in three years (2008–2010) at two sites in the...
Full Text:: distribution, breeding performance, and nutritional stress of kittiwakes in three years (2008–2010) at two

Single nucleotide polymorphism (SNP) markers associated with high folate content in wild potato species

Creator:: Bali, Sapinder, Robinson, Bruce R., Sathuvalli, Vidyasagar, Bamberg, John, and Goyer, Aymeric
Abstract:: Micronutrient deficiency, also known as the hidden hunger, affects over two billion people worldwide. Potato is the third most consumed food crops in the world, and is therefore a fundamental element of food security for millions of people. Increasing the amount of micronutrients in food crop could help alleviate worldwide...
Resource Type:: Article
Full Text:: analyses. These SNPs have potential to be used in marker-assisted selection for breeding high folate

GenizaMatthewMolecularCellularBiologyDeNovoTranscriptome.pdf

Creator:: Fox, Samuel E., Geniza, Matthew, Hanumappa, Mamatha, Naithani, Sushma, Sullivan, Chris, Preece, Justin, Tiwari, Vijay K., Elser, Justin, Leonard, Jeffrey M., Sage, Abigail, Jaiswal, Pankaj, and et al.
Abstract:: BACKGROUND: Triticum monococcum (2n) is a close ancestor of T. urartu, the A-genome progenitor of cultivated hexaploid wheat, and is therefore a useful model for the study of components regulating photomorphogenesis in diploid wheat. In order to develop genetic and genomic resources for such a study, we constructed genome-wide transcriptomes...
Full Text:: States of America, 2 Molecular and Cellular Biology Graduate Program, Oregon State University, Corvallis

A new species of Sebastes (Scorpaeniformes: Sebastidae) from the northeastern Pacific, with a redescription of the blue rockfish, S. mystinus (Jordan and Gilbert, 1881)

Creator:: Frable, Benjamin W., Wagman, D. Wolfe, Frierson, Taylor N., Aguilar, Andres, and Sidlauskas, Brian L.
Abstract:: The diverse predatory rockfishes (Sebastes spp.) support extensive commercial fisheries in the northeastern Pacific. Although 106 species of Sebastes are considered valid, many of the ecological, geographical, and morphological boundaries separating them lack clarity. We clarify one such boundary by separating the blue rockfish Sebastes mystinus (Jordan and Gilbert, 1881)...
Resource Type:: Article
Full Text:: rockfish Se- bastes mystinus (Jordan and Gilbert, 1881) into 2 species on the basis of molecular and

CompletionReport_Banks.pdf

Creator:: Banks, Michael A., Blouin, Michael S., Moyer, Gregory R., Theriault, Veronique, Whitcomb, Amelia, Loomis, David, and Jackson, Laura S.
Abstract:: Data, pedigrees, reports and manuscripts herein are from an investigation conducted with coho salmon of the Umpqua River in southern Oregon from 2001-2009. They relate to a study investigating several areas of uncertainty about the use of salmon hatcheries to increase the abundance of wild populations. At that time, there...
Full Text:: mechanisms. Molecular Ecology. 20(9): 1860–1869. Task 4: How does the supplementation program modify

ScholarsArchive@OSU

From fossils to phylogenies

Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm

Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus)

Cuesta-MarcosAlfonsoCropSoilScienceUSDABarleyCore.pdf

Differences in Adélie Penguin (Pygoscelis adeliae) Chick Growth Rates and Diet

RobyDanielFisheriesWildlifeForagingResponsesBlack-Legged.pdf

Single nucleotide polymorphism (SNP) markers associated with high folate content in wild potato species

GenizaMatthewMolecularCellularBiologyDeNovoTranscriptome.pdf

A new species of Sebastes (Scorpaeniformes: Sebastidae) from the northeastern Pacific, with a redescription of the blue rockfish, S. mystinus (Jordan and Gilbert, 1881)

CompletionReport_Banks.pdf

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