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Filtering by: Creator Lipton, R. Subject Marine bacteria

The proteomic and transcriptomic responses to iron, sulfur, and nitrogen limitation in the abundant marine bacterium Candidatus Pelagibacter ubique

Creator:

Smith, Daniel P.

Abstract:

Batch cultures of Candidatus Pelagibacter ubique were grown under iron-, organosulfur-, and nitrogen-limiting conditions to understand how this ubiquitous marine bacterium responds to and interacts with environments where growth is limited by the availability of these nutrients. Global gene expression was monitored using microarrays and quantitative mass spectrometry to observe...

Resource Type:

Dissertation

Full Text:

in all chapters was done by Angela D. Norbeck, Kristin E. Burnum, Therese R. Clauss, Mary S. Lipton
Single-Cell Genomics of Uncultivated Marine Bacteria

Creator:

Landry, Zachary

Abstract:

Historically, the difficulty of obtaining pure cultures of abundant marine microbial plankton has an obstacle to reconstructing the underlying mechanisms of biogeochemistry in the ocean. While a number of dominant marine species from the ocean surface have been cultured, the dominant microbial plankton of the dark ocean proved far more...

Resource Type:

Dissertation

Full Text:

., Stepanauskas, R., and Giovannoni, S.J. (2014). Single-cell enabled comparative genomics of a deep ocean SAR11
Genome-enabled investigation of the minimal growth requirements andphosphate metabolism for Pelagibacter marine bacteria

Creator:

Carini, Paul J.

Abstract:

Members of the SAR11 clade of heterotrophic α-proteobacteria are ubiquitous and abundant in the world's oceans where they are thought to play a pivotal role in the global carbon cycle. The first SAR11 bacterium cultivated in vitro, 'Candidatus Pelagibacter ubique' HTCC1062 (Ca. P. ubique), was isolated by dilution into sterile...

Resource Type:

Dissertation