Nitrification is a critical step in the global nitrogen cycle involving the biological oxidation of ammonia (NH₃) to nitrite (NO₂⁻ ) and then to nitrate (NO₃⁻). The first step in nitrification is carried out by NH₃-oxidizing bacteria (AOB) and archaea (AOA), and the second by NO₂⁻-oxidizing bacteria (NOB). In addition...
Nitrification is the process within the global Nitrogen Cycle where ammonia (NH3) is oxidized to nitrate (NO₃⁻) and can be carried out by two distinct groups of bacteria. The ammonia-oxidizing bacteria (AOB) first oxidize NH₃ to nitrite (NO₂⁻), and second, the nitrite-oxidizing bacteria (NOB) oxidize NO₂⁻ to NO₃⁻. In aerobic...
Nitrification and denitrification are major biological processes transforming nitrogen (N) in soils to plant available N, highly leachable nitrate (NO₃⁻) and gaseous N oxides. Although many studies in the past have studied N cycling communities, the effect of increased N inputs on ammonia-oxidizer and denitrifier population dynamics is still under...
Marine microorganisms play a significant role in the cycling of nutrients in the open ocean through production, consumption, and degradation of organic matter (OM). Carbon (C), nitrogen (N), and phosphorus (P) are essential ingredients in every known recipe for life. However, the cycling of each of these elements proceeds at...
Poplar Bark Storage Proteins (BSP) are important in storing nitrogen (N)
recovered from autumn-senescent leaves, and supply N for spring growth. Plants of
Populus tremula x P. alba were transformed with a poplar BSP antisense cDNA
fused to a double 35S promoter. Regenerated lines were screened for reduced BSP
accumulation...
While community ecologists have traditionally focused on local-scale processes, it has become apparent that a broader perspective, which explores the community-level ramifications of material fluxes within and between ecosystems, is necessary to effectively evaluate bottom-up influences on community structure and dynamics. In this dissertation, I employed ecosystem principles to understand...
The feedbacks between hydrology and biogeochemical cycling of nitrogen (N) are of critical importance to global bioavailable N budgets. Human activities are dramatically increasing the amount of bioavailable N in the biosphere, which is causing increasingly frequent and severe impacts on ecosystems and human welfare. Streams are important features in...
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I examined factors regulating decomposition rates of red alder (Alnus rubra)) and Douglas-fir (Pseudotsuga menziesii) leaf litter in Coast Range riparian areas in western Oregon. Overall, this study was designed to examine the influence that leaf litter quality characteristics and decomposition site treatment have on decomposition rates, to provide a...
Red alder (Alnus rubra Bong.) is recognized as an important source of nitrogen to
ecosystems that it inhabits. I examined N dynamics within alder trees, alder leaf litter, and the soil beneath alder leaf litter. ¹⁵Nitrogen, a stable isotope of N, was used as a tracer to follow the movement...