This dataset is based on quantitative PCR (qPCR) output. Output from all qPCR was compiled in this dataset and kept as the original. Information about sampling time, id, concentration, sites and a conversion of the quantity in femtograms were added as complement to the qPCR output to facilitate data analysis
Endophytes, foliage inhabiting fungi, are an unexplored source of fungal biodiversity and a potential resource for the production of bioactive natural products. In this research, leaf tissues from the species Arbutus menziesii, Rhododendron macrophyllum and the genus, Ilex and Salix were collected for the isolation of endophytic fungi. Fungal extracts...
Natural products from plants, bacteria, and fungi play an important role in society. Over the last 35 years, natural products and their derivatives have inspired over 60% of all FDA approved small-molecule drugs, and are among the top prescribed therapeutics.1-2 Fleming’s discovery of the fungal antibiotic penicillin started the “Golden...
Fungi are the primary biological agents of wood deterioration and cause major economic losses of wood products globally. Wood in outdoor applications tends to remain wet for extended time periods, making it susceptible to fungal attack. Understanding the factors involved in fungal colonization of wood is important for developing improved...
Spalting fungi show strong potential as natural colorants on a variety of materials, specifically textiles and wood. Four species of spalting fungi are currently utilized in this manner: Scytalidium cuboideum, which produces a red pigment called draconin red, Scytalidium ganodermophthorum, that produces an unknown yellow pigment, and Chlorociboria aeruginosa and...
The Pacific Northwest is an internationally important region for the production of Brassica seed and other seed crops including grass seed. Oregon lawmakers mandated research into the co-existence of canola (Brassica napus) with other Brassica production in the Willamette Valley and House Bill 2427 was signed into law in 2013,...
Entomopathogenic fungi are cosmopolitan microbial pathogens that cause fungous diseases in a wide range of insects via spore infection. Due to their natural enemy status, they have tremendous potential for use as microbial control agents against insect pests, especially subterranean pests for which few management options are available. The clover...
This thesis describes an investigation of the natural products chemistry of two fungal species of the genus Tolypocladium. Natural products are small organic molecules that are considered non-essential for cell growth and reproduction, and thus part of secondary metabolism. Chemical profiling of these secondary metabolites using a combination of high-performance...
Fuel accumulation and climate shifts are predicted to increase the frequency of high-severity fires in ponderosa pine (Pinus ponderosa Dougl. ex Laws) forests of central Oregon. The combustion of fuels containing large downed wood can result in intense soil heating, alteration of soil properties, and mortality of microbes. Previous studies...
Commercial methodologies for producing fungal pigments are of worldwide interest due to the desire to move away from synthetic dyes. Chlorociboria species and Scytalidium species have been reported to produce sufficient yields of pigments for commercial production and have attracted special attention because of their use in spalted wood applications....