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- Creator:
- Loper, Joyce E., Hassan, Karl A., Mavrodi, Dmitri V., Davis, Edward W., II, Lim, Chee Kent, Shaffer, Brenda T., Elbourne, Liam D. H., Stockwell, Virginia O., Hartney, Sierra L., Breakwell, Katy, Henkels, Marcella D., Tetu, Sasha G., Rangel, Lorena I., Kidarsa, Teresa A., Wilson, Neil L., van de Mortel, Judith E., Song, Chunxu, Blumhagen, Rachel, Radune, Diana, Hostetler, Jessica B., Brinkac, Lauren M., Durkin, A. Scott, Kluepfel, Daniel A., Wechter, W. Patrick, Anderson, Anne J., Kim, Young Cheol, Pierson, Leland S., III, Pierson, Elizabeth A., Lindow, Steven E., Kobayashi, Donald Y., Raaijmakers, Jos M., Weller, David M., Thomashow, Linda S., Allen, Andrew E., and Paulsen, Ian T.
- Abstract:
- We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
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- Article
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- . Shaffer1, Liam D. H. Elbourne3, Virginia O. Stockwell2, Sierra L. Hartney2, Katy Breakwell3, Marcella D
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- Creator:
- Armisen, David, Rajakumar, Rajendhran, Friedrich, Markus, Benoit, Joshua B., Robertson, Hugh M., Panfilio, Kristen A., Ahn, Seung-Joon, Poelchau, Monica F., Chao, Hsu, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dugan, Shannon, Gibbs, Richard A., Hughes, Daniel S. T., Han, Yi, Lee, Sandra L., Murali, Shwetha C., Muzny, Donna M., Qu, Jiaxin, Worley, Kim C., Munoz-Torres, Monica, Abouheif, Ehab, Bonneton, Francois, Chen, Travis, Chiang, Li-Mei, Childers, Christopher P., Cridge, Andrew G., Crumiere, Antonin J. J., Decaras, Amelie, Didion, Elise M., Duncan, Elizabeth J., Elpidina, Elena N., Fave, Marie-Julie, Finet, Cedric, Jacobs, Chris G. C., Jarvela, Alys M. Cheatle, Jennings, Emily C., Jones, Jeffery W., Lesoway, Maryna P., Lovegrove, Mackenzie R., Martynov, Alexander, Oppert, Brenda, Lillico-Ouachour, Angelica, Rajakumar, Arjuna, Refki, Peter Nagui, Rosendale, Andrew J., Santos, Maria Emilia, Toubiana, William, van der Zee, Maurijn, Jentzsch, Iris M. Vargas, Lowman, Aidamalia Vargas, Viala, Severine, Richards, Stephen, and Khila, Abderrahman
- Abstract:
- Background: Having conquered water surfaces worldwide, the semi-aquatic bugs occupy ponds, streams, lakes, mangroves, and even open oceans. The diversity of this group has inspired a range of scientific studies from ecology and evolution to developmental genetics and hydrodynamics of fluid locomotion. However, the lack of a representative water strider...
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- Article
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- Dugan11, Richard A. Gibbs11, Daniel S. T. Hughes11, Yi Han11, Sandra L. Lee11, Shwetha C. Murali12, Donna
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- Creator:
- Pfeifer, Marion, Lefebvre, Veronique, Gardner, Toby A., Arroyo‐Rodriguez, Victor, Baeten, Lander, Banks‐Leite, Cristina, Barlow, Jos, Betts, Matthew G., Brunet, Joerg, Cerezo, Alexis, Cisneros, Laura M., Collard, Stuart, D'Cruze, Neil, da Silva Motta, Catarina, Duguay, Stephanie, Eggermont, Hilde, Eigenbrod, Felix, Hadley, Adam S., Hanson, Thor R., Hawes, Joseph E., Heartsill Scalley, Tamara, Klingbeil, Brian T., Kolb, Annette, Kormann, Urs, Kumar, Sunil, Lachat, Thibault, Lakeman Fraser, Poppy, Lantschner, Victoria, Laurance, William F., Leal, Inara R., Lens, Luc, Marsh, Charles J., Medina‐Rangel, Guido F., Melles, Stephanie, Mezger, Dirk, Oldekop, Johan A., Overal, William L., Owen, Charlotte, Peres, Carlos A., Phalan, Ben, Pidgeon, Anna M., Pilia, Oriana, Possingham, Hugh P., Possingham, Max L., Raheem, Dinarzarde C., Ribeiro, Danilo B., Ribeiro Neto, Jose D., Robinson, W. Douglas, Robinson, Richard, Rytwinski, Trina, Scherber, Christoph, Slade, Eleanor M., Somarriba, Eduardo, Stouffer, Philip C., Struebig, Matthew J., Tylianakis, Jason M., Tscharntke, Teja, Tyre, Andrew J., Urbina Cardona, Jose N., Vasconcelos, Heraldo L., Wearn, Oliver, Wells, Konstans, Willig, Michael R., Wood, Eric, Young, Richard P., Bradley, Andrew V., and Ewers, Robert M.
- Abstract:
- Habitat fragmentation studies have produced complex results that are challenging to synthesize. Inconsistencies among studies may result from variation in the choice of landscape metrics and response variables, which is often compounded by a lack of key statistical or methodological information. Collating primary datasets on biodiversity responses to fragmentation in...
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- Article
- Full Text:
- FRAGmentation Pfeifer, M., Lefebvre, V., Gardner, T. A., Arroyo‐Rodriguez, V., Baeten, L., Banks‐ Leite, C
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- Creator:
- Dugger, Katie M., Forsman, Eric D., Franklin, Alan B., Davis, Raymond J., White, Gary C., Schwarz, Carl J., Burnham, Kenneth P., Nichols, James D., Hines, James E., Yackulic, Charles B., Doherty, Paul F. Jr, Bailey, Larissa, Clark, Darren A., Ackers, Steven H., Andrews, Lawrence S., Augustine, Benjamin, Biswell, Brian L., Blakesley, Jennifer, Carlson, Peter C., Clement, Matthew J., Diller, Lowell V., Glenn, Elizabeth M., Green, Adam, Gremel, Scott A., Herter, Dale R., Higley, J. Mark, Hobson, Jeremy, Horn, Rob B., Huyvaert, Kathryn P., McCafferty, Christopher, McDonald, Trent, McDonnell, Kevin, Olson, Gail S., Reid, Janice A., Rockweit, Jeremy, Ruiz, Viviana, Saenz, Jessica, and Sovern, Stan G.
- Abstract:
- Estimates of species' vital rates and an understanding of the factors affecting those parameters over time and space can provide crucial information for management and conservation. We used mark–recapture, reproductive output, and territory occupancy data collected during 1985–2013 to evaluate population processes of Northern Spotted Owls (Strix occidentalis caurina) in...
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- Article
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- , Darren A. Clark, Steven H. Ackers, Lawrence S. Andrews, Benjamin Augustine, Brian L. Biswell, Jennifer
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- Creator:
- Leising, Andrew W., Schroeder, Isaac D., Bograd, Steven J., Bjorkstedt, Eric P., Field, John, Sakuma, Keith, Abell, Jeffrey, Robertson, Roxanne, Tyburczy, Joe, Peterson, William T., Brodeur, Ric, Barcelo, Caren, Auth, Toby D., Daly, Elizabeth A., Campbell, Gregory S., Hildebrand, John A., Suryan, Robert M., Gladics, Amanda J., Horton, Cheryl A., Kahru, M, Manzano-Sarabia, M., McClatchie, S., Weber, Edward D., Watson, William, Santora, Jarrod A., Sydeman, William J., Melin, Sharon R., Delong, Robert L., Largier, John, Kim, Sung Yong, Chavez, Francisco P., Golightly, Richard T., Schneider, Stephanie R., Warzybok, Pete, Bradley, Russel, Jahncke, Jaime, Fisher, Jennifer, and Peterson, Jay
- Abstract:
- In 2013, the California current was dominated by strong coastal upwelling and high productivity. Indices of total cumulative upwelling for particular coastal locations reached some of the highest values on record. Chlorophyll a levels were high throughout spring and summer. Catches of upwelling-related fish species were also high. After a...
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- Article
- Full Text:
- ://cdss.library.oregonstate.edu/sa-termsofuse STATE OF THE CALIFORNIA CURRENT CalCOFI Rep., Vol. 55, 2014 51 ANDREW W
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- Creator:
- Arighi, Cecilia N., Carterette, Ben, Cohen, K. Bretonnel, Krallinger, Martin, Wilbur, W. John, Fey, Petra, Dodson, Robert, Cooper, Laurel, Van Slyke, Ceri E., Dahdul, Wasila, Mabee, Paula, Li, Donghui, Harris, Bethany, Gillespie, Marc, Jimenez, Silvia, Roberts, Phoebe, Matthews, Lisa, Becker, Kevin, Drabkin, Harold, Bello, Susan, Licata, Luana, Chatr-aryamontri, Andrew, Schaeffer, Mary L., Park, Julie, Haendel, Melissa, Van Auken, Kimberly, Li, Yuling, Chan, Juancarlos, Muller, Hans-Michael, Cui, Hong, Balhoff, James P., Wu, Johnny Chi-Yang, Lu, Zhiyong, Wei, Chih-Hsuan, Tudor, Catalina O., Raja, Kalpana, Subramani, Suresh, Natarajan, Jeyakumar, Cejuela, Juan Miguel, Dubey, Pratibha, and Wu, Cathy
- Abstract:
- In many databases, biocuration primarily involves literature curation, which usually involves retrieving relevant articles, extracting information that will translate into annotations and identifying new incoming literature. As the volume of biological literature increases, the use of text mining to assist in biocuration becomes increasingly relevant. A number of groups have...
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- Article
- Full Text:
- Licata17, Andrew Chatr-aryamontri18, Mary L. Schaeffer19, Julie Park20, Melissa Haendel21, Kimberly Van
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- Creator:
- Wells, Brian K., Schroeder, Isaac D., Santora, Jarrod A., Hazen, Elliott L., Bograd, Steven J., Bjorkstedt, Eric P., Loeb, Valerie J., Mcclatchie, Sam, Weber, Edward D., Watson, William, Thompson, Andrew R., Peterson, William T., Brodeur, Richard D., Harding, Jeff, Field, John, Sakuma, Keith, Hayes, Sean, Mantua, Nathan, Sydeman, William J., Losekoot, Marcel, Thompson, Sarah Ann, Largier, John, Kim, Sung Yong, Chavez, Francisco P., Barceló, Caren, Warzybok, Pete, Bradley, Russel, Jahncke, Jaime, Goericke, Ralf, Campbell, Gregory S., Hildebrand, John A., Melin, Sharon R., Delong, Robert L., Gomez-Valdes, Jose, Lavaniegos, Bertha, Gaxiola-Castro, Gilberto, Golightly, Richard T., Schneider, Stephanie R., Lo, Nancy, Suryan, Robert M., Gladics, Amanda J., Horton, Cheryl A., Fisher, Jennifer, Morgan, Cheryl, Peterson, Jay, Daly, Elizabeth A., Auth, Toby D., and Abell, Jeffrey
- Abstract:
- This report reviews the state of the California Current System (CCS) between winter 2012 and spring 2013, and includes observations from Washington State to Baja California. During 2012, large-scale climate modes indicated the CCS remained in a cool, productive phase present since 2007. The upwelling season was delayed north of...
- Full Text:
- Wells, B. K., Schroeder, I. D., Santora, J. A., Hazen, E. L., Bograd, S. J., Bjorkstedt, E. P
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- Creator:
- Wells, Brian K., Schroeder, Isaac D., Santora, Jarrod A., Hazen, Elliott L., Bograd, Steven J., Bjorkstedt, Eric P., Loeb, Valerie J., Mcclatchie, Sam, Weber, Edward D., Watson, William, Thompson, Andrew R., Peterson, William T., Brodeur, Richard D., Harding, Jeff, Field, John, Sakuma, Keith, Hayes, Sean, Mantua, Nathan, Sydeman, William J., Losekoot, Marcel, Thompson, Sarah Ann, Largier, John, Kim, Sung Yong, Chavez, Francisco P., Barceló, Caren, Warzybok, Pete, Bradley, Russel, Jahncke, Jaime, Goericke, Ralf, Campbell, Gregory S., Hildebrand, John A., Melin, Sharon R., Delong, Robert L., Gomez-Valdes, Jose, Lavaniegos, Bertha, Gaxiola-Castro, Gilberto, Golightly, Richard T., Schneider, Stephanie R., Lo, Nancy, Suryan, Robert M., Gladics, Amanda J., Horton, Cheryl A., Fisher, Jennifer, Morgan, Cheryl, Peterson, Jay, Daly, Elizabeth A., Auth, Toby D., and Abell, Jeffrey
- Abstract:
- This report reviews the state of the California Current System (CCS) between winter 2012 and spring 2013, and includes observations from Washington State to Baja California. During 2012, large-scale climate modes indicated the CCS remained in a cool, productive phase present since 2007. The upwelling season was delayed north of...
- Full Text:
- 0.20 0.30 0.40 0.50 0.60 Chlorophyll a (µg L-1) B: CCurrent South 0 20 40 60 80 100 120 140
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- Creator:
- Alford, Matthew H., Peacock, Thomas, MacKinnon, Jennifer A., Nash, Jonathan D., Buijsman, Maarten C., Centurioni, Luca R., Chao, Shenn-Yu, Chang, Ming-Huei, Farmer, David M., Fringer, Oliver B., Fu, Ke-Hsien, Gallacher, Patrick C., Graber, Hans C., Helfrich, Karl R., Jachec, Steven M., Jackson, Christopher R., Klymak, Jody M., Ko, Dong S., Jan, Sen, Johnston, T. M. Shaun, Legg, Sonya, Lee, I-Huan, Lien, Ren-Chieh, Mercier, Matthieu J., Moum, James N., Musgrave, Ruth, Park, Jae-Hun, Pickering, Andrew I., Pinkel, Robert, Rainville, Luc, Ramp, Steven R., Rudnick, Daniel L., Sarkar, Sutanu, Scotti, Alberto, Simmons, Harper L., St. Laurent, Louis C., Venayagamoorthy, Subhas K., Wang, Yu-Huai, Wang, Joe, Yang, Yiing J., Paluszkiewicz, Theresa, and Tang, Tswen-Yung (David)
- Abstract:
- Internal gravity waves, the subsurface analogue of the familiar surface gravity waves that break on beaches, are ubiquitous in the ocean. Because of their strong vertical and horizontal currents, and the turbulent mixing caused by their breaking, they affect a panoply of ocean processes, such as the supply of nutrients...
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- Article
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- , Andrew I. Pickering2,3, Robert Pinkel1, Luc Rainville2, Steven R. Ramp20, Daniel L. Rudnick1, Sutanu
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- Creator:
- Wells, Brian K., Schroeder, Isaac D., Santora, Jarrod A., Hazen, Elliott L., Bograd, Steven J., Bjorkstedt, Eric P., Loeb, Valerie J., Mcclatchie, Sam, Weber, Edward D., Watson, William, Thompson, Andrew R., Peterson, William T., Brodeur, Richard D., Harding, Jeff, Field, John, Sakuma, Keith, Hayes, Sean, Mantua, Nathan, Sydeman, William J., Losekoot, Marcel, Thompson, Sarah Ann, Largier, John, Kim, Sung Yong, Chavez, Francisco P., Barceló, Caren, Warzybok, Pete, Bradley, Russel, Jahncke, Jaime, Goericke, Ralf, Campbell, Gregory S., Hildebrand, John A., Melin, Sharon R., Delong, Robert L., Gomez-Valdes, Jose, Lavaniegos, Bertha, Gaxiola-Castro, Gilberto, Golightly, Richard T., Schneider, Stephanie R., Lo, Nancy, Suryan, Robert M., Gladics, Amanda J., Horton, Cheryl A., Fisher, Jennifer, Morgan, Cheryl, Peterson, Jay, Daly, Elizabeth A., Auth, Toby D., and Abell, Jeffrey
- Abstract:
- This report reviews the state of the California Current System (CCS) between winter 2012 and spring 2013, and includes observations from Washington State to Baja California. During 2012, large-scale climate modes indicated the CCS remained in a cool, productive phase present since 2007. The upwelling season was delayed north of...
- Resource Type:
- Article