Population trends and patterns in species distributions are the major currencies used to examine responses by biodiversity to changing environments. Effective conservation recommendations require that models of both distribution dynamics and population trends accurately reflect reality. However, identification of the appropriate temporal and spatial scales of animal response, and then...
As CAD tools become more sophisticated, engineers are able to more easily create complex part geometries with minimal mass given strength and stiffness requirements. However, these complex part geometries can be difficult to subtractively manufacture, which consequently increases manufacturing cost and production time. This thesis presents a method independent of...
Smoldering can play a dangerous role in the ignition and spread of wildfires. Naturally occurring fuels consist of multiple layers of organic materials with varying particle sizes due to differences in decomposition stages with fuel depth, yet the influence of particle size on burning behavior is poorly understood. Previous research...
Recent evidence suggests that population declines of some avian species may be driven primarily by reduced quantity and diversity of early-successional habitat on the breeding grounds. Increasing intensity of forest management on private lands and decreased harvest rates on federal lands has resulted in a loss of the diverse early-successional...
Hemlock dwarf mistletoe (Arceuthobium tsugense subsp. tsugense) is an arboreal, hemiparasitic plant that principally parasitizes western hemlock (Tsuga heterophylla). Hemlock dwarf mistletoe exerts a profound influence on infected trees that can drastically change the structure of the tree crown due to reduced growth, top dieback, branch deformation and death, resulting...
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David C. Shaw
Hemlock dwarf mistletoe (Arceuthobium tsugense subsp. tsugense) is an
The rapid accumulation of polyethylene terephthalate (PET) plastic waste caused by disposable plastic water bottle use is a worldwide problem that will continue to affect our environment, economy and society unless new methods of reduction and degradation are explored. The large amounts of energy and resources that are required during...
Algae can be used in a variety of wastewater systems to capture nutrients while fixing carbon dioxide from the atmosphere. I conducted field trials at three locations in Oregon with both corn and potato crops to assess the agronomic value and environmental impact of using the resulting algal biomass as...
Limnology is undergoing a transition to high-throughput -omic analysis of freshwater
bacterial communities. An important first step in making the transition is to
characterize several genomes that can be used as references to guide metagenome
assembly and analysis. Here I characterize four new freshwater cyanobacterial
genomes, a pair of lake...
In the mountains of the Western US, shifts in the timing and magnitude of snow water equivalent (SWE) over the past century are well documented and attributed to climate warming, but the magnitude of sensitivity depends on elevation. We modeled the spatial distribution of SWE and its sensitivity to climate...
Despite recent efforts to improve site safety, construction still accounts for a disproportionate injury and illness rate. According to the 2007 injury and illness data released by the National Safety Council, the construction industry has a fatality and disabling injury rate that is approximately three times higher than the all-industry...
Intensive forest management (IFM, dense conifer plantings and herbicide applications) may alter the characteristics of early seral plant communities that function as major habitat resources for a host of wildlife species, including cervid herbivores such as Cervus elaphus and Odocoileus hemionus. Such large herbivores can also substantially affect plant community...
Many devices and methods for radiological searches are currently being developed, including scanning using simple detectors, mapping using large-volume detectors, and Compton imaging using 3-D position sensitive detectors. However, these devices are typically expensive and the methods used require long periods of time to generate a direction or location. The...
Our goal is to build a system to model the RNA sequences that reveals their structural information by using efficient dynamic programming algorithms and deep learning approaches. We aim to 1) achieve linear-time for RNA secondary structure prediction based on existing minimum free energy models; 2) utilize deep neural networks...
210 East First Street (site 35WS453) contains the only extant remains of a once thriving Overseas Chinese settlement, in the city of The Dalles, Oregon. Very little is known about the everyday lives of these early settlers, or the pressures that they faced. This thesis will help to enrich the...
Electrospinning and electrospray are both nano-scale material fabrication techniques, based on related phenomena of electrically charged fluid spray from a droplet of liquid. Material is dissolved in liquid, then a spray is generated by applying a high voltage, creating an electric field, between the fluid dispensing capillary and a grounded...
Bridges are a vital component of transportation infrastructure in the United States, and the continual maintenance and preservation of bridges is critical to maintaining their structural capacity and maximizing service life. One of the most significant issues faced by concrete bridges is the infiltration of moisture from the roadway surface...
Steelhead and rainbow trout are common names for marine-migratory (anadromous) and freshwater-resident forms of Oncorhynchus mykiss, a partially migratory salmonid fish. Anadromous and resident forms are sympatric and can produce offspring with a life history different from their own (i.e., steelhead parents can produce rainbow trout offspring and vice versa)....
Over the last ten years, clinical, pre-clinical and animal studies have shown associations between the microbiota and neurological functions. Recent work by the scientific community on the gut-microbiome-brain axis have revealed that gut dysbiosis and specific microbial taxa are associated with a myriad of neurological conditions, such as autism spectrum...
In 1965 Malcolm X said that we are living in a time of extremism. People in power have misused it now there has to be a change, and a better world has to be built, and the only way it's going to be built is with extreme methods. And I,...