In the Columbia Basin, pre-plant soil fumigation is commonly used in potato production for pest control, but fumigation can kill non-target organisms within the soil, result in unintended shifts in the microbial community, and disrupt long-term soil health. Cover crops have been shown to strongly influence the numbers and communities...
The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Connectivity of fish populations is a crucial question for fisheries conservation and the development of spatial management plans. Both adult and larval movement define the extent and direction of ecological and evolutionary overlap between geographic regions and, therefore, how we define stocks for management purposes. Within that context, my work...
Small-scale fisheries account for at least 40 percent of global fisheries catch, 90 percent of the people employed along capture fisheries value chains operate in small-scale fisheries, and 45 million women participate in small-scale fisheries globally. The past few years have brought warnings from policymakers and resource managers about risks...
Aroma is one of the major components that determines the quality of wine and consumer acceptability. Fruitiness is a highly desirable aroma quality in white wines and has been well accepted by consumers across the globe. Tropical fruit aroma has been substantially studied in Sauvignon Blanc wines due to its...