Large scale disruption of natural habitats worldwide has led to concern over the
effects of habitat fragmentation on wildlife populations. Small scale experiments may be
a useful tool for discovering effects of fragmentation over larger landscape scales. I
sought to explore the potential for using voles as an experimental model...
Research on the population genetics of microbial organisms requires the use of specialized analyses designed for clonal organisms to avoid violating the assumptions of traditional population genetic models. The tools necessary for performing these analyses existed as a set of unrelated software with non-overlapping capabilities and did not cover all...
Modern plant pathology benefits from integrating methods and concepts from evolutionary biology. For example, evolutionary concepts are used to identify and examine species boundaries of plant pathogens, recognize processes underlying pathogen biogeography, identify traits that characterize emerging species, and discover new molecular interactions that originate under processes of selection. In...
Accessions of common wheat (Triticum aestivum
L. subsp. aestivum) from the USDA–ARS
National Small Grains Collection (NSGC) are a
resource for wheat scientists worldwide. The
genetic diversity of the wheat core subset, representing
approximately 10% of the collection’s
42,138 T. aestivum accessions, was examined
using 390 diversity arrays technology (DArT)...
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Grains Collection
Bonman, J. M., Babiker, E. M., Cuesta-Marcos, A., Esvelt-Klos, K.,
Brown-Guedira, G
Despite knowledge that concerted evolution of high-copy loci is often imperfect,
studies that investigate the extent of intragenomic polymorphisms and comparisons
across a large number of species are rarely made. We present a bioinformatic pipeline
for characterizing polymorphisms within an individual among copies of a high-copy
locus. Results are presented...
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7 reads with a
G in that position and 3 with a C. In this case the consensus would have called a G
Plant pathogens in the genus Phytophthora are known to cause disease on field crops, nursery plants, and forest trees. The best known example probably is Phytophthora infestans, which triggered the infamous Irish potato famine. Other important Phytophthora species include: P. ramorum (sudden oak death pathogen), P. sojae (soybean root rot...
Soil nitrogen exists largely as organic matter, including plant liter, dead animal matter, and microbial necromass. About 90% of soil organic nitrogen is proteinaceous material that is too large for plants and microorganisms to assimilate directly. Protein depolymerization therefore plays a critical role in mobilizing this organic source of nitrogen,...
A study was conducted to determine the effect of dietary protein on
performance of commercial New Zealand White rabbits.
In Part I of this study, three levels of crude protein (17.5, 19
and 20.5%) were fed to lactating does and their offspring during a 12
month period. Total rabbits born...
Within the Pacific Northwest, USA, root diseases of conifers are a major forest health concern. These diseases are primarily caused by basidiomycete fungi. These fungal associates play a vital role in carbon sequestration but also have a significant negative economic impact within the timber industry. As a result, research on...
Effective and sustainable fisheries management not only depends on identifying and defining stocks (fundamental unit of management), but also on having knowledge of factors influencing the abundance, distribution and connectivity of stocks. Population structure of Pacific cod (Gadus macrocephalus) in the southeastern Bering Sea (EBS) remains unresolved although genetic data...