Index Catalog // ScholarsArchive@OSU

Influence of cheese-making recipes on the composition and characteristics of Camembert-type cheese

Creator:: Batty, Danton, Waite-Cusic, Joy G., and Meunier-Goddik, Lisbeth
Abstract:: Bloomy rind cheeses, including Camembert and related varieties, can he produced using alternative processes that vary based on milk preacidification, cutting, curd handling, and ripening parameters. Modification of these parameters creates distinct cheeses such as lactic curd, stabilized curd, and hybrids of the two. The objective of this study was...
Resource Type:: Article
Full Text:: cheese Danton Batty, Joy G. Waite-Cusic,* and Lisbeth Meunier-Goddik Department of Food Science and

S-nitrosocaptopril nanoparticles as nitric oxide-liberating and transnitrosylating anti-infective technology

Creator:: Mordorski, Breanne, Pelgrift, Robert, Adler, Brandon, Krausz, Aimee, da Costa Neto, Alexandre Batista, Liang, Hongying, Gunther, Leslie, Clendaniel, Alicea, Harper, Stacey, Friedman, Joel M., Nosanchuk, Joshua D., Nacharaju, Parimala, and Friedman, Adam J.
Abstract:: Nitric oxide (NO) is an essential agent of the innate immune system which exhibits multi-mechanistic antimicrobial activity. Previously, increased antimicrobial activity against E. coli with nitric oxide releasing nanoparticles (NO-np) was demonstrated when combined with glutathione, versus NO-np alone, due to formation of S-nitrosoglutathione (GSNO), a potent transnitrosylating agent. To...
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Full Text:: 1 Title page S-nitrosocaptopril Nanoparticles as Nitric

Gene-silencing antisense oligomers inhibit Acinetobacter growth in vitro and in vivo

Creator:: Geller, Bruce L., Marshall-Batty, Kimberly, Schnell, Frederick J., McKnight, Mattie M., Iversen, Patrick L., and Greenberg, David E.
Abstract:: Background: Peptide-conjugated phosphorodiamidate morpholino oligomers (PPMOs) are synthetic DNA/RNA analogs that silence expression of specific genes. We studied whether PPMOs targeted to essential genes in Acinetobacter lwoffii and A. baumannii are active in vitro and in vivo. Methods: PPMOs were evaluated in vitro using MIC and viability assays, and in...
Resource Type:: Article
Full Text:: :538–82. 335 2. Rathinavelu S, Zavros Y, Merchant JL. Acinetobacter lwoffıi infection and gastritis

RuauxCraigVeterinaryMedicineEffectSyringeAggregate.pdf

Creator:: Heikes, Brandon W. and Ruaux, Craig G.
Abstract:: Structured Abstract - OBJECTIVE: To assess the effect of transfusion using a syringe and microaggregate filter on short-term survival and circulating half-life of autologous feline RBCs. DESIGN: Prospective, internally controlled, observational study. SETTING: A University Teaching Hospital ANIMALS: Six apparently healthy, owned pet cats. INTERVENTIONS: Blood collection by jugular venipuncture....
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Full Text:: transfused autologous fresh feline red blood cells Brandon C. Heikes, Craig G Ruaux* College

Neutron-irradiation effects on the V-I characteristics of YBa₂Cu₃O₇₋δ twinned crystals: Linking transport results in a variety of copper oxide superconductors

Creator:: Brown, Brandon, Roberts, J. M., and Tate, Janet
Abstract:: We have investigated the depinning process of magnetic flux vortices in twinned crystals of YBa₂Cu₃O₇₋δ in intermediate applied magnetic fields parallel to the crystallographic c axis through precise resistivity measurements before and after fast-neutron irradiation. Of particular interest for each field is the power-law dependence of the electric field on...
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Full Text:: twinned crystals: Linking transport results in a variety of copper oxide superconductors Brandon Brown, J

Young Adult Follow-up of Adolescent Girls in Juvenile Justice Using the Columbia Suicide Severity Rating Scale

Creator:: Kerr, David C. R., Gibson, Brandon, Leve, Leslie D., and DeGarmo, David S.
Abstract:: We studied the reliability and validity of the Columbia Suicide Severity Scale (C-SSRS). Severely delinquent adolescent girls (n = 166) participated in a treatment trial and repeated assessments over time. Lifetime suicide attempt history was measured using the C-SSRS in early adulthood (n = 144; 7–12 years post-baseline). Nonclinician raters...
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Full Text:: Center Oregon State University Brandon Gibson, MS Leslie D. Leve, PhD David S. DeGarmo, PhD

Scaling of thin-film Nd₁.₈₅Ce₀.₁₅CuO[subscript 4-y] resistivity-current isotherms at low fields: Implications for vortex phase transitions and universality

Creator:: Roberts, J. M., Brown, Brandon, Tate, Janet, Xi, X. X., and Mao, S. N.
Abstract:: We have investigated a second-order phase transition of the vortex lattice in thin-film Nd₁.₈₅Ce₀.₁₅CuO[subscript 4-y] from 1 mT to 1 T applied magnetic fields. The dc resistivity-current density data for each field exhibit critical scaling consistent with a second-order vortex-liquid to vortex-solid phase transition. The high-field data support the vortex-glass...
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Full Text:: PHYSICAL REVIE% B VOLUME 51, NUMBER 21 1 JUNE 1995-I Scaling of thin-film Nd, s,Ceo»Cu04 resistivity

Fluctuations in Evolutionary Integration Allow for Big Brains and Disparate Faces

Creator:: Evans, Kory M., Waltz, Brandon T., Tagliacollo, Victor A., Sidlauskas, Brian L., and Albert, James S.
Abstract:: In theory, evolutionary modularity allows anatomical structures to respond differently to selective regimes, thus promoting morphological diversification. These differences can then influence the rate and direction of phenotypic evolution among structures. Here we use geometric morphometrics and phenotypic matrix statistics to compare rates of craniofacial evolution and estimate evolvability in...
Resource Type:: Preprint and Article
Full Text:: Disparate Faces 1 Kory M. Evans1, Brandon T. Waltz1, Victor A. Tagliacollo2, Brian L. Sidlauskas3 & James

Feeding performance by sympatric blue and fin whales exploiting a common prey resource

Creator:: Friedlaender, Ari S., Goldbogen, Jeremy A., Hazen, Elliott L., Calambokidis, John, and Southall, Brandon L.
Abstract:: A major focus in macroecology is to understand the mechanisms that drive differences in habitat, morphology, and behavior in closely related species (Brown 1995). Within this paradigm, energy use and prey acquisition play a fundamental role in affecting behavior, especially with respect to foraging patterns and predator‐prey interactions. Because resources...
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Full Text:: prey resource Friedlaender, A. S., Goldbogen, J. A., Hazen, E. L., Calambokidis, J., & Southall, B. L

Resiliency analysis for complex engineered system design

Creator:: Mehrpouyan, Hoda, Haley, Brandon, Dong, Andy, Tumer, Irem Y., and Hoyle, Christopher
Abstract:: Resilience is a key driver in the design of systems that must operate in an uncertain operating environment, and is a key metric to assess the capacity for systems to perform within the specified performance envelop despite disturbances to their operating environment. This paper describes a graph spectral approach to...
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Full Text:: Mehrpouyan, Brandon Haley Complex Engineered Systems Design Lab School of Mechanical, Industrial, and

Scaling of voltage-current characteristics of thin-film Y-Ba-Cu-O at low magnetic fields

Creator:: Roberts, J. M., Brown, Brandon, Hermann, B. A., Tate, J., and Tate, Janet
Abstract:: We have measured voltage-current characteristics for YBa₂Cu₃O₇ thin films in magnetic fields from 5 T to ambient, including some in the millitesla range. In all cases, the resistivity —current density isotherms can be separated into two classes: those which exhibit upward curvature, and have constant resistivity at low currents, and...
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Full Text:: voltage-current characteristics of thin-film Y-Ba-Cu-0 at low magnetic fields J. M. Roberts, Brandon

Strain-resolved microbial community proteomics reveals simultaneous aerobic and anaerobic function during gastrointestinal tract colonization of a preterm infant

Creator:: Brooks, Brandon, Mueller, Ryan S., Young, Jacque C., Morowitz, Michael J., Hettich, Robert L., and Banfield, Jillian F.
Abstract:: While there has been growing interest in the gut microbiome in recent years, it remains unclear whether closely related species and strains have similar or distinct functional roles and if organisms capable of both aerobic and anaerobic growth do so simultaneously. To investigate these questions, we implemented a high-throughput mass...
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Full Text:: tract colonization of a preterm infant Brandon Brooks 1, Ryan S. Mueller 1, 2, Jacque C. Young 3, 4

Bacterial dominance in subseafloor sediments characterized by methane hydrates

Creator:: Briggs, Brandon R., Inagaki, Fumio, Morono, Yuki, Futagami, Taiki, Huguet, Carme, Rosell-Mele, Antoni, Lorenson, Thomas D., and Colwell, Frederick S.
Abstract:: The degradation of organic carbon in subseafloor sediments on continental margins contributes to the largest reservoir of methane on Earth. Sediments in the Andaman Sea are composed of ~ 1% marine-derived organic carbon and biogenic methane is present. Our objective was to determine microbial abundance and diversity in sediments that...
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Full Text:: untitled R E S EA RCH AR T I C L E Bacterial dominance in

Prey density and distribution drive the three-dimensional foraging strategies of the largest filter feeder

Creator:: Goldbogen, Jeremy A., Hazen, Elliott L., Friedlaender, Ari S., Calambokidis, John, DeRuiter, Stacy L., Stimpert, Alison K., and Southall, Brandon L.
Abstract:: 1. Despite their importance in determining the rate of both energy gain and expenditure, how the fine-scale kinematics of foraging are modified in response to changes in prey abundance and distribution remain poorly understood in many animal ecosystems. 2. In the marine environment, bulk-filter feeders rely on dense aggregations of...
Resource Type:: Article

Simultaneous Host-Pathogen Transcriptome Analysis during Granulibacter bethesdensis Infection of Neutrophils from Healthy Subjects and Patients with Chronic Granulomatous Disease

Creator:: Greenberg, David E., Sturdevant, Daniel E., Marshall-Batty, Kimberly R., Chu, Jessica, Pettinato, Anthony M., Virtaneva, Kimmo, Lane, John, Geller, Bruce L., Porcella, Stephen F., Gallin, John I., Holland, Steven M., and Zarember, Kol A.
Abstract:: Polymorphonuclear leukocytes (PMN) from patients with chronic granulomatous disease (CGD) fail to produce microbicidal concentrations of reactive oxygen species (ROS) due to mutations in NOX2. Patients with CGD suffer from severe, life-threatening infections and inflammatory complications. Granulibacter bethesdensis is an emerging Gram-negative pathogen in CGD that resists killing by PMN...
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Full Text:: , D. E., Sturdevant, D. E., Marshall-Batty, K. R., Chu, J., Pettinato, A. M., Virtaneva, K

Microbial distributions detected by an oligonucleotide microarray across geochemical zones associated with methane in marine sediments from the Ulleung Basin

Creator:: Briggs, Brandon R., Graw, Michael, Brodie, Eoin L., Bahk, Jang-Jun, Kim, Sung-Han, Hyun, Jung-Ho, Kim, Ji-Hoon, Torres, Marta, and Colwell, Frederick S.
Abstract:: The biogeochemical processes that occur in marine sediments on continental margins are complex; however, from one perspective they can be considered with respect to three geochemical zones based on the presence and form of methane: sulfate-methane transition (SMTZ), gas hydrate stability zone (GHSZ), and free gas zone (FGZ). These geochemical...
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Full Text:: ZONES ASSOCIATED WITH METHANE IN MARINE SEDIMENTS FROM THE ULLEUNG BASIN Brandon R. Briggs1,2

ThrashJCameronMicrobiologySingle-CellEnabled_FiguresS1-S16.pdf

Creator:: Thrash, J. Cameron, Temperton, Ben, Swan, Brandon K., Landry, Zachary C., Giovannoni, Stephan J., and et al.
Abstract:: Bacterioplankton of the SAR11 clade are the most abundant microorganisms in marine systems, usually representing 25% or more of the total bacterial cells in seawater worldwide. SAR11 is divided into subclades with distinct spatiotemporal distributions (ecotypes), some of which appear to be specific to deep water. Here we examine the...
Full Text:: SAR11 bathytype J. Cameron Thrash1,2,*, Ben Temperton1, Brandon K. Swan3, Zachary C. Landry1

ThrashJCameronMicrobiologySingle-CellEnabled.pdf

Creator:: Thrash, J. Cameron, Temperton, Ben, Swan, Brandon K., Landry, Zachary C., Giovannoni, Stephan J., and et al.
Abstract:: Bacterioplankton of the SAR11 clade are the most abundant microorganisms in marine systems, usually representing 25% or more of the total bacterial cells in seawater worldwide. SAR11 is divided into subclades with distinct spatiotemporal distributions (ecotypes), some of which appear to be specific to deep water. Here we examine the...
Full Text:: Thrash, J. C., Temperton, B., Swan, B. K., Landry, Z. C., Woyke, T., DeLong, E. F., ... & Giovannoni, S

Effects of Low-Density Feeding on Elk-Fetus Contact Rates on Wyoming Feedgrounds

Creator:: Creech, Tyler G., Cross, Paul C., Scurlock, Brandon M., Maichak, Eric J., Rogerson, Jared D., Henningsen, John C., and Creel, Scott
Abstract:: High seroprevalance for Brucella abortus among elk on Wyoming feedgrounds suggests that supplemental feeding may influence parasite transmission and disease dynamics by altering the rate at which elk contact infectious materials in their environment. We used proximity loggers and video cameras to estimate rates of elk-to-fetus contact (the primary source...
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Full Text:: , Bozeman, MT 59715, USA BRANDON M. SCURLOCK, Wyoming Game and Fish Department, 432 E Mill Street, Pinedale

Changing the culture of coastal, ocean, and marine sciences : strategies for individual and collective actions

Creator:: Behl, Mona, Cooper, Sharon, Garza, Corey, Kolesar, Sarah E., Legg, Sonya, Lewis, Jonathan C., White, Lisa, and Jones, Brandon
Abstract:: Geoscience is plagued with structural and systemic barriers that prevent people of historically excluded groups from fully participating in, contributing to, and accruing the benefits of geosciences. A change in the culture of our learning and working environments is required to dismantle barriers and promote belonging, accessibility, justice, equity, diversity,...
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Full Text:: , and Brandon Jones and fulfilling careers replete with purpose and comradeship. We challenge all

Water and bottom properties of a coastal environment derived from Hyperion data measured from the EO-1 spacecraft platform

Creator:: Lee, ZhongPing, Casey, Brandon, Arnone, Robert, Weidemann, Alan, Parsons, Rost, Montes, Marcos J., Gao, Bo-Cai, Goode, Wesley, Davis, Curtiss O., and Dye, Julie
Abstract:: Hyperion is a hyperspectral sensor on board NASA’s EO-1 satellite with a spatial resolution of approximately 30 m and a swath width of about 7 km. It was originally designed for land applications, but its unique spectral configuration (430 nm – 2400 nm with a ~10 nm spectral resolution) and...
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Full Text:: ZhongPing Leea, Brandon Caseyb, Robert Arnonea, Alan Weidemanna, Rost Parsonsc, Marcos J. Montesd, Bo-Cai

Metagenomic and metatranscriptomic inventories of the lower Amazon River, May 2011

Creator:: Satinsky, Brandon M., Fortunato, Caroline S., Doherty, Mary, Smith, Christa B., Sharma, Shalabh, Ward, Nicholas D., Krusche, Alex V., Yager, Patricia L., Richey, Jeffrey E., Moran, Mary Ann, and Crump, Byron C.
Abstract:: Background: The Amazon River runs nearly 6500 km across the South American continent before emptying into the western tropical North Atlantic Ocean. In terms of both volume and watershed area, it is the world’s largest riverine system, affecting elemental cycling on a global scale. Results: A quantitative inventory of genes...
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Full Text:: metatranscriptomic inventories of the lower Amazon River, May 2011 Brandon M. Satinsky1, Caroline S. Fortunato2, Mary

Wildfire risk as a socioecological pathology

Creator:: Fischer, A. Paige, Spies, Thomas A., Steelman, Toddi A., Moseley, Cassandra, Johnson, Bart R., Bailey, John D., Ager, Alan A., Bourgeron, Patrick, Charnley, Susan, Collins, Brandon M., Kline, Jeffrey D., Leahy, Jessica E., Littell, Jeremy S., Millington, James D. A., Nielsen-Pincus, Max, Olsen, Christine S., Paveglio, Travis B., Roos, Christopher I., Steen-Adams, Michelle M., Stevens, Forrest R., Vukomanovic, Jelena., White, Eric M., and Bowman, David M. J. S.
Abstract:: Wildfire risk in temperate forests has become a nearly intractable problem that can be characterized as a socioecological “pathology”: that is, a set of complex and problematic interactions among social and ecological systems across multiple spatial and temporal scales. Assessments of wildfire risk could benefit from recognizing and accounting for...
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Full Text:: Bailey5, Alan A Ager6, Patrick Bourgeron7, Susan Charnley8, Brandon M Collins9, Jeffrey D Kline2, Jessica

Estimates of Chinook salmon consumption in Washington State inland waters by four marine mammal predators from 1970 to 2015

Creator:: Chasco, Brandon E., Kaplan, Isaac C., Thomas, Austen C., Acevedo-Gutiérrez, Alejandro, Noren, Dawn P., Ford, Michael J., Hanson, M. Bradley, Scordino, Jonathan J., Jeffries, Steven J., Pearson, Scott, Marshall, Kristin N., and Ward, Eric J.
Abstract:: Conflicts can arise when the recovery of one protected species limits the recovery of another through competition or predation. The recovery of many marine mammal populations on the west coast of the United States has been viewed as a success; however, within Puget Sound in Washington State, the increased abundance...
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Full Text:: Brandon Chasco, Isaac C. Kaplan, Austen Thomas, Alejandro Acevedo-Gutiérrez, Dawn Noren, Michael J. Ford

Competing tradeoffs between increasing marine mammal predation and fisheries harvest of Chinook salmon

Creator:: Chasco, Brandon E., Kaplan, Isaac C., Thomas, Austen C., Acevedo-Gutiérrez, Alejandro, Noren, Dawn P., Ford, Michael J., Hanson, M. Bradley, Scordino, Jonathan J., Jeffries, Steven J., Marshall, Kristin N., Shelton, Andrew O., Matkin, Craig, Burke, Brian J., and Ward, Eric J.
Abstract:: Many marine mammal predators, particularly pinnipeds, have increased in abundance in recent decades, generating new challenges for balancing human uses with recovery goals via ecosystem-based management. We used a spatio-temporal bioenergetics model of the Northeast Pacific Ocean to quantify how predation by three species of pinnipeds and killer whales (Orcinus...
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Full Text:: tradeoffs between increasing marine mammal predation and fisheries harvest of Chinook salmon Brandon E

Competing tradeoffs between increasing marine mammal predation and fisheries harvest of Chinook salmon

Creator:: Acevedo-Gutiérrez, Alejandro, Chasco, Brandon E., Ward, Eric J., Ford, Michael J., Shelton, Andrew O., Thomas, Austen C., Burke, Brian J., Marshall, Kristin N., Matkin, Craig, Jeffries, Steven J., Noren, Dawn P., Kaplan, Isaac C., Scordino, Jonathan J., and Hanson, M. Bradley
Abstract:: Many marine mammal predators, particularly pinnipeds, have increased in abundance in recent decades, generating new challenges for balancing human uses with recovery goals via ecosystem-based management. We used a spatio-temporal bioenergetics model of the Northeast Pacific Ocean to quantify how predation by three species of pinnipeds and killer whales (Orcinus...
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Full Text:: tradeoffs between increasing marine mammal predation and fisheries harvest of Chinook salmon Brandon E

Viruses in unexplained encephalitis cases in American black bears (Ursus americanus)

Creator:: Alex, Charles E., Fahsbender, Elizabeth, Altan, Eda, Bildfell, Robert, Wolff, Peregrine, Jin, Ling, Black, Wendy, Jackson, Kenneth, Woods, Leslie, Munk, Brandon, Tse, Tiffany, Delwart, Eric, and Pesavento, Patricia A.
Abstract:: Viral infections were investigated in American black bears (Ursus americanus) from Nevada and northern California with and without idiopathic encephalitis. Metagenomics analyses of tissue pools revealed novel viruses in the genera Circoviridae, Parvoviridae, Anelloviridae, Polyomaviridae, and Papillomaviridae. The circovirus and parvovirus were of particular interest due to their potential importance...
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Full Text:: Bildfell4,5, Peregrine Wolff6, Ling Jin4,5, Wendy Black5, Kenneth Jackson1, Leslie Woods7, Brandon Munk8

Assessing Potato Psyllid Haplotypes in Potato Crops in the Pacific Northwestern United States

Creator:: Swisher, Kylie D., Sengoda, Venkatesan G., Dixon, Jacob, Munyaneza, Joseph E., Murphy, Alexzandra F., Rondon, Silvia I., Thompson, Brandon, Karasev, Alexander V., Wenninger, Erik J., Olsen, Nora, and Crosslin, James M.
Abstract:: The potato psyllid, Bactericera cockerelli (Šulc), is a vector of the bacterium ‘Candidatus Liberibacter solanacearum’ (Lso) that has been linked to the economically devastating zebra chip disease of potato. To date, four haplotypes of the potato psyllid have been identified and include Central, Western, Northwestern, and Southwestern haplotypes. Zebra chip...
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Full Text:: ., Murphy, A. F., Rondon, S. I., ... & Crosslin, J. M. (2014). Assessing potato psyllid haplotypes in

DharmawardhanaPalithaBotanyPlantPathologyGramene2013_SupplementaryData.pdf

Creator:: Monaco, Marcela K., Stein, Joshua, Naithani, Sushma, Wei, Sharon, Dharmawardhana, Palitha, Kumari, Sunita, Amarasinghe, Vindhya, Youens-Clark, Ken, Thomason, James, Preece, Justin, Pasternak, Shiran, Olson, Andrew, Jiao, Yinping, Lu, Zhenyuan, Bolser, Dan, Kerhornou, Arnaud, Staines, Dan, Walts, Brandon, Wu, Guanming, D'Eustachio, Peter, Haw, Robin, Croft, David, Kersey, Paul J., Stein, Lincoln, Jaiswal, Pankaj, and Ware, Doreen
Abstract:: Gramene (http://www.gramene.org) is a curated online resource for comparative functional genomics in crops and model plant species, currently hosting 27 fully and 10 partially sequenced reference genomes in its build number 38. Its strength derives from the application of a phylogenetic framework for genome comparison and the use of ontologies...
Full Text:: REFERENCES Same as References 12-‐22 in manusccript file. • Atwell, S

DharmawardhanaPalithaBotanyPlantPathologyGramene2013.pdf

Creator:: Monaco, Marcela K., Stein, Joshua, Naithani, Sushma, Wei, Sharon, Dharmawardhana, Palitha, Kumari, Sunita, Amarasinghe, Vindhya, Youens-Clark, Ken, Thomason, James, Preece, Justin, Pasternak, Shiran, Olson, Andrew, Jiao, Yinping, Lu, Zhenyuan, Bolser, Dan, Kerhornou, Arnaud, Staines, Dan, Walts, Brandon, Wu, Guanming, D'Eustachio, Peter, Haw, Robin, Croft, David, Kersey, Paul J., Stein, Lincoln, Jaiswal, Pankaj, and Ware, Doreen
Abstract:: Gramene (http://www.gramene.org) is a curated online resource for comparative functional genomics in crops and model plant species, currently hosting 27 fully and 10 partially sequenced reference genomes in its build number 38. Its strength derives from the application of a phylogenetic framework for genome comparison and the use of ontologies...
Full Text:: resources Gramene 2013: comparative plant genomics resources Monaco, M. K., Stein, J., Naithani, S., Wei

Tamm Review: Management of mixed-severity fire regime forests in Oregon, Washington, and Northern California

Creator:: Hessburg, Paul F., Spies, Thomas A., Perry, David A., Skinner, Carl N., Taylor, Alan H., Brown, Peter M., Stephens, Scott L., Larson, Andrew J., Churchill, Derek J., Povak, Nicholas A., Singleton, Peter H., McComb, Brenda, Zielinski, William J., Collins, Brandon M., Salter, R. Brion, Keane, John J., Franklin, Jerry F., and Riegel, Greg
Abstract:: Increasingly, objectives for forests with moderate- or mixed-severity fire regimes are to restore successionally diverse landscapes that are resistant and resilient to current and future stressors. Maintaining native species and characteristic processes requires this successional diversity, but methods to achieve it are poorly explained in the literature. In the Inland...
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Full Text:: . Povak j, Peter H. Singleton j, Brenda McComb c, William J. Zielinski k, Brandon M. Collins l, R. Brion

Tello-RuizGramene2016Comparative.pdf

Creator:: Tello-Ruiz, Marcela K., Stein, Joshua, Wei, Sharon, Preece, Justin, Olson, Andrew, Naithani, Sushma, Amarasinghe, Vindhya, Dharmawardhana, Palitha, Jiao, Yinping, Mulvaney, Joseph, Kumari, Sunita, Chougule, Kapeel, Elser, Justin, Wang, Bo, Thomason, James, Bolser, Daniel M., Kerhornou, Arnaud, Walts, Brandon, Fonseca, Nuno A., Huerta, Laura, Keays, Maria, Tanga, Y. Amy, Parkinson, Helen, Fabregat, Antonio, McKay, Sheldon, Weiser, Joel, D'Eustachio, Peter, Stein, Lincoln, Petryszak, Robert, Kersey, Paul J., Jaiswal, Pankaj, and Ware, Doreen
Abstract:: Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the database website adopted a new Drupal management platform. The...
Full Text:: Kerhornou3, Brandon Walts3, Nuno A. Fonseca3, Laura Huerta3, Maria Keays3, Y. Amy Tang3, Helen Parkinson3

Tello-RuizGramene2016ComparativeSupplementaryTablesS1-S6.pdf

Creator:: Tello-Ruiz, Marcela K., Stein, Joshua, Wei, Sharon, Preece, Justin, Olson, Andrew, Naithani, Sushma, Amarasinghe, Vindhya, Dharmawardhana, Palitha, Jiao, Yinping, Mulvaney, Joseph, Kumari, Sunita, Chougule, Kapeel, Elser, Justin, Wang, Bo, Thomason, James, Bolser, Daniel M., Kerhornou, Arnaud, Walts, Brandon, Fonseca, Nuno A., Huerta, Laura, Keays, Maria, Tanga, Y. Amy, Parkinson, Helen, Fabregat, Antonio, McKay, Sheldon, Weiser, Joel, D'Eustachio, Peter, Stein, Lincoln, Petryszak, Robert, Kersey, Paul J., Jaiswal, Pankaj, and Ware, Doreen
Abstract:: Gramene (http://www.gramene.org) is an online resource for comparative functional genomics in crops and model plant species. Its two main frameworks are genomes (collaboration with Ensembl Plants) and pathways (The Plant Reactome and archival BioCyc databases). Since our last NAR update, the database website adopted a new Drupal management platform. The...
Full Text:: Atwell, S., et al. (2010). "Genome-wide association study of 107 phenotypes in Arabidopsis thaliana

State of the Climate in 2012

Creator:: Blunden, Jessica and Arndt, Derek S.
Abstract:: For the first time in several years, the El Niño-Southern Oscillation did not dominate regional climate conditions around the globe. A weak La Niña dissipated to ENSOneutral conditions by spring, and while El Niño appeared to be emerging during summer, this phase never fully developed as sea surface temperatures in...
Resource Type:: Article
Full Text:: Blunden, J., & Arndt, D. S. (2013). State of the Climate in 2012. Bulletin of the American Meteorological

Friedlaender AriHMSCPreyDensityDistributionSupportingInformationLaySummary.pdf

Creator:: Goldbogen, Jeremy A., Hazen, Elliott L., Friedlaender, Ari S., and et al.
Abstract:: 1. Despite their importance in determining the rate of both energy gain and expenditure, how the fine-scale kinematics of foraging are modified in response to changes in prey abundance and distribution remain poorly understood in many animal ecosystems. 2. In the marine environment, bulk-filter feeders rely on dense aggregations of...
Full Text:: . Goldbogen, Elliott L. Hazen, Ari S. Friedlaender, John Calambokidis, Stacy L. DeRuiter, Alison K. Stimpert

Marine Protected Areas and Fishers' Involvement: the Case of the Iroise Sea, Western Brittany, France

Creator:: Alban, Frederique, Pennanguer, S., and Sabourin, A.
Abstract:: Access restrictions to traditionally-used resources, that are associated with the establishment of marine protected areas (MPA), often generate conflicts. Public participation in decision-making process has been widely recognised as a critical factor in legitimising conservation policy and enhancing its success. This paper discusses fishers involvement issues in the context of...
Resource Type:: Research Paper
Full Text:: Proceedings 9 [5]. WELLS, B. and K. BRANDON, 1992, Peoples and parks: linking protected area management with

Krill biomass and aggregation structure in relation to tidal cycle in a penguin foraging region off the Western Antarctic Peninsula

Creator:: Bernard, Kim S. and Steinberg, Deborah K.
Abstract:: Antarctic krill are a key component of the diet of Adélie penguins inhabiting the Western Antarctic Peninsula (WAP), yet our understanding of the variability of krill distribution patterns within nearshore penguin feeding grounds is limited. A recent study of the foraging patterns of penguins breeding in the northern WAP suggests...
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Full Text:: Antarctic Peninsula 2 Kim S. Bernard 1* and Deborah K. Steinberg 1 3 1. Virginia Institute of Marine

KerrDavidPsychologyJuvenileJusticeGirls.pdf

Creator:: Kerr, David C. R., DeGarmo, David S., Leve, Leslie D., and Chamberlain, Patricia
Abstract:: OBJECTIVE: Multidimensional Treatment Foster Care (MTFC) has been found to reduce delinquency among girls in juvenile justice through 2-year follow-up. Given that such girls are at elevated risk for suicide and depression into adulthood, we tested MTFC effects on long term trajectories of suicidal ideation and depressive symptoms. METHOD: Girls...
Full Text:: , D. S., Leve, L. D., & Chamberlain, P. (2014). Juvenile justice girls’ depressive symptoms and

Friedlaender AriHMSCPreyDensityDistribution.pdf

Creator:: Goldbogen, Jeremy A., Hazen, Elliott L., Friedlaender, Ari S., and et al.
Abstract:: 1. Despite their importance in determining the rate of both energy gain and expenditure, how the fine-scale kinematics of foraging are modified in response to changes in prey abundance and distribution remain poorly understood in many animal ecosystems. 2. In the marine environment, bulk-filter feeders rely on dense aggregations of...
Full Text:: . S., Calambokidis, J., DeRuiter, S. L., Stimpert, A. K., & Southall, B. L. (2015). Prey density and

Listric normal faulting on the Cascadia continental margin

Creator:: McNeill, Lisa C., Piper, Kenneth A., Goldfinger, Chris, Kulm, LaVerne, and Yeats, Robert S.
Abstract:: Analysis of multichannel seismic reflection profiles reveals that listric normal faulting is widespread on the northern Oregon and Washington continental shelf and upper slope, suggesting E-W extension in this region. Fault activity began in the late Miocene and, in some cases, has continued into the Holocene. Most listric faults sole...
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Full Text:: Goldfinger 3, LaVeme D. Kulm 3, and Robert S. Yeats 1 Abstract. Analysis of multichannel seismic

Depressive Symptom Trajectories Among Girls in the Juvenile Justice System: Findings from an RCT of Multidimensional Treatment Foster Care

Creator:: Harold, Gordon T., Kerr, David C. R., Van Ryzin, Mark, DeGarmo, David S., Rhoades, Kimberly A., and Leve, Leslie D.
Abstract:: Youth depression is a significant and growing international public health problem. Youth who engage in high levels of delinquency are at particularly high risk for developing problems with depression. The present study examined the impact of a behavioral intervention designed to reduce delinquency (Multidimensional Treatment Foster Care; MTFC) compared to...
Resource Type:: Article
Full Text:: Center and Oregon State University Mark Van Ryzin, David S. DeGarmo, Kimberly Rhoades, and Leslie D

Nonmuscle myosins II-B and Va are components of detergentresistant membrane skeletons derived from mouse forebrain

Creator:: Ishmael, Jane E., Safic, Masa, Amparan, David, Vogel, Walter K., Pham, Tuyen, Marley, Kevin, Filtz, Theresa M., and Maier, Claudia S.
Abstract:: Myosins are actin-based molecular motors that may have specialized trafficking and contractile functions in cytoskeletal compartments that lack microtubules. The postsynaptic excitatory synapse is one such specialization, yet little is known about the spatial organization of myosin motor proteins in the mature brain. We used a proteomics approach to determine...
Resource Type:: Preprint and Article
Full Text:: 1, David Amparan 1, Walter K. Vogel 1, Tuyen Pham1, Kevin Marley2, Theresa M. Filtz1 and Claudia S

Wheat fertilization experiments in the Columbia Basin 1953-55 : progress report

Creator:: Hunter, Albert S. (Albert Sinclair), 1908-1991, Gerard, Cleveland J., Waddoups, H. Marr, Hall, W. E., Cushman, H. E., Alban, L. A. (Lawrence Arthur), 1922-1965, and Oregon State College. Agricultural Experiment Station
Abstract:: Published February 1957. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: Columbia Basin p953-55 Albert S. Hunter C!eveland J. Gerard H. Marr Waddoups W. E. Hall H. E. Cushman

Stream biomonitoring using macroinvertebrates around the globe: a comparison of large-scale programs

Creator:: Buss, Daniel F., Carlisle, Daren M., Chon, Tae-Soo, Culp, Joseph, Harding, Jon S., Keizer-Vlek, Hanneke E., Robinson, Wayne A., Strachan, Stephanie, Thirion, Christa, and Hughes, Robert M.
Abstract:: Water quality agencies and scientists are increasingly adopting standardized sampling methodologies because of the challenges associated with interpreting data derived from dissimilar protocols. Here, we compare 13 protocols for monitoring streams from different regions and countries around the globe. Despite the spatially diverse range of countries assessed, many aspects of...
Resource Type:: Article
Full Text:: the globe: a comparison of large-scale programs Buss, D. F., Carlisle, D. M., Chon, T. S., Culp, J

Effects of physical factors on the vertical distribution of larval walleye pollock Theragra chalcogramma under controlled laboratory conditions

Creator:: Olla, Bori L. and Davis, Michael W.
Abstract:: This study examined, under controlled laboratory conditions, behavioral responses of larval walleye pollock (4 to 8 mm) to various physical factors that may potentially play a role in vertical movements and distribution. Diel periodicity in vertical distribution was evident and appeared to be under exogenous control. During the day, with...
Resource Type:: Article
Full Text:: -82 Batty, R. S. (1987). Effect of light intensity on activity and food- searching of larval

Inter-laboratory Validation of Bioaccessibility Testing for Metals

Creator:: Henderson, Rayetta G., Verougstraete, Violaine, Anderson, Kim, Arbildua, José J., Brock, Thomas O., Brouwers, Tony, Cappellini, Danielle, Delbeke, Katrien, Herting, Gunilla, Hixon, Greg, Odnevall Wallinder, Inger, Rodriguez, Patricio H., Van Assche, Frank, Wilrich, Peter, and Oller, Adriana R.
Abstract:: Bioelution assays are fast, simple alternatives to in vivo testing. In this study, the intra- and inter-laboratory variability in bioaccessibility data generated by bioelution tests were evaluated in synthetic fluids relevant to oral, inhalation, and dermal exposure. Using one defined protocol, five laboratories measured metal release from cobalt oxide, cobalt...
Resource Type:: Article

XingZhenyuChemistryReducingCO2DenseNanoporous.pdf

Creator:: Xing, Zhenyu, Wang, Bao, Gao, Wenyang, Pan, Changqing, Halsted, Joshua K., Chong, Elliot S., Lu, Jun, Wang, Xingfeng, Luo, Wei, Chang, Chih-Hung, Wen, Youhai, Ma, Shengqian, Amine, Khalil, and Ji, Xiulei
Abstract:: Converting CO2 to valuable materials is attractive.Herein, we report using simple metallothermic reactions to reduce atmospheric CO2 to dense nanoporous graphene. By using a Zn/Mg mixture as a reductant, the resulted nanoporous graphene exhibits highly desirable properties: high specific surface area of 1900 m2/g, a great conductivity of 1050 S/m...
Full Text:: . Halsteda, Elliot S. Chonga, Jun Lub, Xingfeng Wanga, Wei Luoa, Chih-Hung Changc, Youhai Wend, Shengqian Mae

Quantifying Bulk Electrode Strain and Material Displacement within Lithium Batteries via High-Speed Operando Tomography and Digital Volume Correlation

Creator:: Finegan, Donal P., Tudisco, Erika, Scheel, Mario, Robinson, James B., Taiwo, Oluwadamilola O., Eastwood, David S., Lee, Peter D., Di Michiel, Marco, Bay, Brian, Hall, Stephen A., Hinds, Gareth, Brett, Dan J. L., and Shearing, Paul R.
Abstract:: Tracking the dynamic morphology of active materials during operation of lithium batteries is essential for identifying causes of performance loss. Digital volume correlation (DVC) is applied to high-speed operando synchrotron X-ray computed tomography of a commercial Li/MnO₂ primary battery during discharge. Real-time electrode material displacement is captured in 3D allowing...
Resource Type:: Article
Full Text:: . Bradley , S. J. Harris , D. J. L. Brett , N. P. Brandon , P. D. Lee , P. J

Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales

Creator:: Zaneveld, Jesse R., Rosales, Stephanie, Fuchs, Corinne, Maynard, Jeffrey A., Thurber, Rebecca Vega, Burkepile, Deron E., Shantz, Andrew A., Pritchard, Catharine E., McMinds, Ryan, Payet, Jérôme P., Welsh, Rory, Correa, Adrienne M. S., and Lemoine, Nathan P.
Abstract:: Losses of corals worldwide emphasize the need to understand what drives reef decline. Stressors such as overfishing and nutrient pollution may reduce resilience of coral reefs by increasing coral–algal competition and reducing coral recruitment, growth and survivorship. Such effects may themselves develop via several mechanisms, including disruption of coral microbiomes....
Resource Type:: Article
Full Text:: the variability of their microbiomes. a b 0 5 10 15 20 25 30 P re tr ea tm en t S um m

Technical note: Time lag correction of aquatic eddy covariance data measured in the presence of waves

Creator:: Berg, P., Reimers, Clare E., Rosman, J. H., Huettel, M., Delgard, M. L., Reidenbach, M. A., and Özkan-Haller, H. Tuba
Abstract:: Extracting benthic oxygen fluxes from eddy covariance time series measured in the presence of surface gravity waves requires careful consideration of the temporal alignment of the vertical velocity and the oxygen concentration. Using a model based on linear wave theory and measured eddy covariance data, we show that a substantial...
Resource Type:: Article
Full Text:: :10.5194/bg-12-6721-2015 © Author(s) 2015. CC Attribution 3.0 License. Technical note: Time lag

Technical note: Time lag correction of aquatic eddy covariance data measured in the presence of waves

Creator:: Berg, P., Reimers, Clare E., Rosman, J. H., Huettel, M., Delgard, M. L., Reidenbach, M. A., and Özkan-Haller, H. Tuba
Abstract:: Extracting benthic oxygen fluxes from eddy covariance time series measured in the presence of surface gravity waves requires careful consideration of the temporal alignment of the vertical velocity and the oxygen concentration. Using a model based on linear wave theory and measured eddy covariance data, we show that a substantial...
Resource Type:: Article
Full Text:: :10.5194/bgd-12-8395-2015 © Author(s) 2015. CC Attribution 3.0 License. This discussion paper is/has been

Australasian sequestrate fungi 18: Solioccasus polychromus gen. & sp. nov., a richly colored, tropical to subtropical, hypogeous fungus

Creator:: Trappe, James M., Castellano, Michael A., Halling, Roy E., Osmundson, Todd W., Binder, Manfred, Fechner, Nigel, and Malajczuk, Nicholas
Abstract:: Solioccasus polychromus gen. & sp. nov., the most brightly colored hypogeous fungus known, is described from Papua New Guinea and tropical northern Australia south into subtropical forests along the Queensland coast and coastal mountains to near Brisbane. Phylogenetic analysis of molecular data places it as a sister genus to Bothia...
Resource Type:: Article
Full Text:: T R A S T R U C T U R E 795–801 Colletotrichum lindemuthianum exhibits different patterns of

Partial derivative games in thermodynamics: A cognitive task analysis

Creator:: Kustusch, Mary Bridget, Roundy, David, Dray, Tevian, and Manogue, Corinne A.
Abstract:: Several studies in recent years have demonstrated that upper-division students struggle with the mathematics of thermodynamics. This paper presents a task analysis based on several expert attempts to solve a challenging mathematics problem in thermodynamics. The purpose of this paper is twofold. First, we highlight the importance of cognitive task...
Resource Type:: Article
Full Text:: - bution of this work must maintain attribution to the author(s) and the published article’s title, journal

Crustal structure beneath the Strait of Juan de Fuca and southern Vancouver Island from seismic and gravity analyses

Creator:: Graindorge, D., Spence, G., Charvis, P., Collot, J. Y., Hyndman, R., and Tréhu, Anne Martine
Abstract:: Wide-angle and vertical incidence seismic data from Seismic Hazards Investigations in Puget Sound (SHIPS), gravity modeling, and seismicity are used to derive two-dimensional crustal models beneath the Strait of Juan de Fuca. The Eocene volcanic Crescent-Siletz terrane is significantly thicker than previously recognized and extends from near the surface to...
Resource Type:: Article
Full Text:: (7.60 ± 0.2 km s�1) between these reflectors is interpreted as a localized slice of mantle accreted with

Survival of Clostridium difficile Spores at Low Temperatures

Creator:: Deng, Kai, Plaza-Garrido, Angela, Torres, J. Antonio, and Paredes-Sabja, Daniel
Abstract:: Clostridium difficile´s presence has been reported in meat products stored typically at low temperatures. This study evaluated the viability in phosphate buffer saline (PBS) of spores from epidemic C. difficile strain R20291 (4.6 log CFU/ml) and M120 (7.8 log CFU/ml). Viability was assessed during 4 months at -80°C, -20°C, 4°C...
Resource Type:: Article
Full Text:: : daniel.paredes.sabja@gmail.com21 2 Abstract 22 Clostridium difficile´s presence has been reported in meat

A two-way nested simulation of the oceanic circulation in the Southwestern Atlantic

Creator:: Combes, Vincent and Matano, Ricardo P.
Abstract:: This article presents the results of a high-resolution (1/12°), two-way nested simulation of the oceanic circulation in the southwestern Atlantic region. A comparison between the model results and extant observations indicates that the nested model has skill in reproducing the best-known aspects of the regional circulation, e.g., the volume transport...
Resource Type:: Article
Full Text:: with previous studies, our simulation also shows that south of �42�S the Malvinas Current is composed

Evaporative dense water formation and cross‐shelf exchange over the northwest Australian inner shelf

Creator:: Shearman, R. Kipp and Brink, Kenneth H.
Abstract:: High‐resolution surveys of oceanographic and atmospheric conditions made during the winter over the inner shelf off northwest Australia are used to examine the coastal ocean response to large outgoing heat and freshwater fluxes. Relatively cool, low‐humidity air blows off the Australian continent out over the tropical continental shelf, resulting in...
Resource Type:: Article
Full Text:: bottom boundary layer of about 0.5 m2 s−1 (and an overlying return flow). Citation: Shearman, R. K., and

Characterization of Schoenoplectus pungens in a Great Lakes Coastal Wetland and a Pacific Northwestern Estuary

Creator:: Albert, Dennis A., Cox, Daniel T., Lemein, Todd, and Yoon, Hyun Doug
Abstract:: This study seeks to identify key components of structure and growth habit of Schoenoplectus pungens (bulrush) that allow it to thrive in severe environments. Schoenoplectus pungens, an emergent herbaceous plant growing in shallow, high energy freshwater and brackish coastal wetlands, occurs throughout North America and several continents. We observe the...
Resource Type:: Article
Full Text:: waterfowl biologist, Brandon Reishus). Waterfowl grazing on S. pungens rhizomes is likely of little

Hydrothermal Discharge During Submarine Eruptions

Creator:: Baker, Edward T., Chadwick, Wi l l iam W. Jr., Cowen, James P., Dziak, Robert P., Rubin, Kenneth H., and Fornari, Daniel J.
Abstract:: Submarine volcanic eruptions and intrusions construct new oceanic crust and build long chains of volcanic islands and vast submarine plateaus. Magmatic events are a primary agent for the transfer of heat, chemicals, and even microbes from the crust to the ocean, but the processes that control these transfers are poorly...
Resource Type:: Article
Full Text:: Oceanography | Vol. 25, No. 1128 O c e a N i c S p r e a d i N g c e N t e r p r O c e S S e S | ridge

Carbon cycling fed by methane seepage at the shallow Cumberland Bay, South Georgia, sub-Antarctic

Creator:: Geprägs, Patrizia, Torres, Marta E., Mau, Susan, Kasten, Sabine, Römer, Miriam, and Bohrmann, Gerhard
Abstract:: Recent studies have suggested that the marine contribution of methane from shallow regions and melting marine-terminating glaciers may have been underestimated. Here we report on methane sources and potential sinks associated with methane seeps in Cumberland Bay, South Georgia's largest fjord system. The average organic carbon content in the upper...
Resource Type:: Article
Full Text:: bay in the bottom water layer. A mean sea-air flux of only 0.005 nM/m2 s confirms that almost no

Doing ‘Conservation’: Effects of Different Interpretations at an Ecuadorian Volunteer Tourism Project

Creator:: Grimm, Kerry E.
Abstract:: As more people volunteer in the name of ‘conservation,’ a careful analysis of ‘conservation’ and the actors’ underlying ideologies becomes pressing. Volunteers work on the seemingly similar goal of ‘conservation,’ but differences in interpretations can have on-the-ground impacts. In this paper, I use interviews and participant interactions to: (1) analyse...
Resource Type:: Article
Full Text:: “shallow,” providing little contribution to locals. Gray and Campbell (2007) questioned Wearing et al.’s

Testing the effectiveness of an acoustic deterrent for grey whales along the Oregon Coast

Creator:: Lagerquist, Barbara, Windsor, Martha, and Mate, Bruce
Abstract:: This study was conducted to determine whether a low-powered sound source could be effective at deterring gray whales from areas that may prove harmful to them. With increased interest in the development of marine renewal energy along the Oregon coast the concern that such development may pose a collision or...
Resource Type:: Technical Report
Full Text:: . Wilson, B. R., Batty, S., Daunt, F. and Carter, C. 2007. Collision risks between marine renewable energy

Crustal-scale structural architecture, shortening, and exhumation of an active, eroding orogenic wedge (Chugach/St Elias Range, southern Alaska)

Creator:: Meigs, Andrew, Johnston, Sarah, Garver, John, and Spotila, James
Abstract:: Active mountain building associated with the accretion of the Yakutat microplate (YT) in southern Alaska is characterized through the combination of a new balanced cross section and new low-temperature cooling ages. This analysis constrains the amount and timing of shortening, the spatial and temporal trends of exhumation, and the interplay...
Resource Type:: Article
Full Text:: tectonically controlled erosion. Citation: Meigs, A., S. Johnston, J. Garver, and J. Spotila (2008), Crustal

The Fort George Wright District, Civilian Conservation Corps, annual ; 1937

Creator:: Civilian Conservation Corps (U.S.). Fort George Wright District
Abstract:: Gerald W. Williams Collection
Resource Type:: Book
Full Text:: Conn photograph try couttery of U. S. Bureau of Reclamation WALTER SCOTT DRYSDALE Colonel, 4th

The Oregon prune : its composition, food value, soil draught

Creator:: Oregon Agricultural Experiment Station and Shaw, G. W. (George Wright), 1864-
Abstract:: Published March 1900. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: 1507 J. W. Wilkinson Corvallis, Benton 18,75 81.25 11,88 88.12 2.09 34,99 49,25 1.79 . 1512 G. S. Batty

Re and Os isotopes of the central Oregon Cascades and along the arc indicate variable homogenization and mafic growth in the deep crust

Creator:: Schmidt, Mariek E., Grunder, Anita L., Rowe, Michael C., and Chesley, John T.
Abstract:: The rhenium-osmium isotopic system has the potential to track the maturation of arc crust at lower crustal levels because the ¹⁸⁷Os/¹⁸⁸Os in magmas is sensitive to the age and composition of crust with which they interact. We here present Re and Os isotopic data for a suite of samples from...
Resource Type:: Article
Full Text:: and Reisberg, 1995; Brandon et al., 2000). Interestingly, the alkali-rich ABS and relatively Nb-rich

Possible emplacement of crustal rocks into the forearc mantle of the Cascadia Subduction Zone

Creator:: Calvert, Andrew J., Fisher, Michael A., Ramachandran, Kumar, and Tréhu, Anne Martine
Abstract:: Seismic reflection profiles shot across the Cascadia forearc show that a 5–15 km thick band of reflections, previously interpreted as a lower crustal shear zone above the subducting Juan de Fuca plate, extends into the upper mantle of the North American plate, reaching depths of at least 50 km. In...
Resource Type:: Article
Full Text:: mineralogy, temperature and pressure predict a value of 7000 m s�1 for the oceanic crust in the Cascadia

Extension courses in home economics, 1930-31: Portland courses; correspondence courses; club programs

Creator:: Oregon State Agricultural College. Extension Service
Abstract:: Published September 1930. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: P.rograms 1 O'.ffe,red by S h 7 1 l' f. H t ,,. \, • c oo o oine nconotrncs ,, , Under the Auspices of

Cumulative-Impacts-of-WE-in-OR-Apr-10-Lit-Review-FINAL.pdf

Creator:: Aquatera Ltd, Parametrix, European Marine Energy Centre, and Powertech
Abstract:: The fundamental aim of the Oregon Wave Energy Trust’s (OWET’s) cumulative effects framework is to provide an enduring set of information, presented in an effective way to inform substantial decisions about the future and ongoing management of wave energy developments in the context of the existing and future situation. At...
Full Text:: effects of alternative energy uses on the outer continental shelf. Herndon, VA: U. S. Department of the

The Emergence of Spatial Cyberinfrastructure

Creator:: Wright, Dawn J. and Wang, Shaowen
Abstract:: Cyberinfrastructure integrates advanced computer, information, and communication technologies to empower computation-based and data-driven scientific practice and improve the synthesis and analysis of scientific data in a collaborative and shared fashion. As such, it now represents a paradigm shift in scientific research that has facilitated easy access to computational utilities and...
Resource Type:: Article
Full Text:: research. Science 308:821-824. 5. Hey T, Tansley S, Tolle K, eds (2009) The Fourth Paradigm: Data

Environmental and Ecological Effects of Ocean Renewable Energy Development: A Current Synthesis

Creator:: Boehlert, George W. and Gill, Andrew B.
Abstract:: Marine renewable energy promises to assist in the effort to reduce carbon emissions worldwide. As with any large-scale development in the marine environment, however, it comes with uncertainty about potential environmental impacts, most of which have not been adequately evaluated—in part because many of the devices have yet to be...
Resource Type:: Article
Full Text:: . Oceanography June 2010 71 through studies and the literature. Note that identifying the stressor(s) then

Incorporating Climate Signals for Improved Ensemble Streamflow Prediction

Creator:: Najafi, Mohammad Reza and Moradkhani, Hamid
Abstract:: Ensemble Streamflow Prediction (ESP) provides the means for statistical post-processing of the forecasts and estimating the inherent uncertainties. On the other hand large scale climate variables provide valuable information for hydrologic predictions. In this study we propose a post-processing procedure that assigns weights to streamflow ensemble members using these large...
Resource Type:: Presentation
Full Text:: . Computers & Geosciences 10: 191-203. Werner K, Brandon D, Clark M, Gangopadhyay S. 2004. Climate index

High temperature processing of pork : a review

Creator:: Davidson, William D. and Oregon State University. Agricultural Experiment Station
Abstract:: Published September 1968. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: conventional and accelerated s-,) stems, respectively. Thus, under the Nebraska sys- tem (Mandigo, 1967), the

Comparison of growth, behavior and lipid concentrations of walleye pollock Theragra chalcogramma larvae fed lipid-enriched, lipid-deficient and field-collected prey

Creator:: Davis, Michael W. and Olla, Bori L.
Abstract:: While growth and survival of marine fish larvae in the sea may be dependent on prey type, size and concentration, nutritional quality of prey may also play an important role. This study investigates the relationships of lipid content of prey with growth, gas bladder size, sinking rate, behavior and survival...
Resource Type:: Article
Full Text:: , Chaetoceros gracilis and Chaetoceros This article was presented by R. S. Batty, Oban, Scotland calcitrans

Alumni directory of the Oregon Agricultural College, Corvallis, Oregon

Creator:: Oregon Agricultural College. Alumni Association
Resource Type:: Book
Full Text:: , Ida Ray (nee Ray). Brandes, Irene, '16, B. S., H. E. Teacher, High School, Ashland, Ore. Brandon

OddenMichellePHHSCost-EffectivenessHypertension.pdf

Creator:: Moran, Andrew E., Odden, Michelle C., Thanataveerat, Anusorn, and et al.
Abstract:: BACKGROUND: On the basis of the 2014 guidelines for hypertension therapy in the United States, many eligible adults remain untreated. We projected the cost-effectiveness of treating hypertension in U.S. adults according to the 2014 guidelines. METHODS: We used the Cardiovascular Disease Policy Model to simulate drug-treatment and monitoring costs, costs...
Full Text:: . R esult s Main Analyses The Cardiovascular Disease Policy Model simula- tions accurately

Simulating farm irrigation system energy requirements

Creator:: Wensink, Robert B., Wolfe, John W. (John William), 1917-, and Kizer, Michael A.
Resource Type:: Technical Report
Full Text:: Requirement s b y Robert B . Wensink John W . Wolfe Michael A . Kize r August 197 6 Project Completion

Fine-scale planktonic habitat partitioning at a shelf-slope front revealed by a high-resolution imaging system

Creator:: Greer, Adam T., Cowen, Robert K., Guigand, Cedric M., and Hare, Jonathan A.
Abstract:: Ocean fronts represent productive regions of the ocean, but predator-prey interactions within these features are poorly understood partially due to the coarse-scale and biases of net-based sampling methods. We used the In Situ Ichthyoplankton Imaging System (ISIIS) to sample across a front near the Georges Bank shelf edge on two...
Resource Type:: Article
Full Text:: rights reserved. a b s t r a c t a r t i c l e i n f o Article history: Received 10 June 2014 Received in

When is bigger better? Early marine residence of middle and upper Columbia River spring Chinook salmon

Creator:: Tomaro, Londi M., Teel, David J., Peterson, William T., and Miller, Jessica A.
Abstract:: Early ocean residence is considered a critical period for juvenile salmon although specific survival mechanisms are often unidentified and may vary by species or life stage. Columbia River spring-run Chinook salmon Oncorhynchus tshawytscha abundance has declined dramatically since the early 1900s. To elucidate mechanisms of early marine survival, we tested...
Resource Type:: Article
Full Text:: successfully avoid predators (Butler & Pickett 1988, Miller et al. 1988) and capture prey (Bailey & Batty 1983

AndersonKimEnvironmentalMolecularToxicologyBioaccessibilityOfMetals.pdf

Creator:: Hillwalker, Wendy E. and Anderson, Kim A.
Abstract:: Bioaccessibility in vitro tests measure the solubility of materials in surrogate biofluids. However, the lack of uniform methods and the effects of variable test parameters on material solubility limit interpretation. One aim of this study was to measure and compare bioaccessibility of selected economically important alloys and metals in surrogate...
Full Text:: . 0269-7491/$ e see front matter � 2013 The Authors. http://dx.doi.org/10.1016/j.envpol.2013.10.006 a b s

Name the experiment! Interpreting thermodynamic derivatives as thought experiments

Creator:: Roundy, David, Kustusch, Mary Bridget, and Manogue, Corinne
Abstract:: We introduce a series of activities to help students understand the partial derivatives that arise in thermodynamics. Students construct thought experiments that would allow them to measure given partial derivatives. These activities are constructed with a number of learning goals in mind, beginning with helping students to learn to think...
Resource Type:: Article
Full Text:: identify the derivative (∂p/∂V )S as 2 essentially the adiabatic compressibility—even though it differs

Deforestation Trends of Tropical Dry Forests in Central Brazil

Creator:: Bianchi, Carlos A. and Haig, Susan M.
Abstract:: Tropical dry forests are the most threatened forest type in the world yet a paucity of research about them stymies development of appropriate conservation actions. The Paran~a River Basin has the most significant dry forest formations in the Cerrado biome of central Brazil and is threatened by intense land conversion...
Resource Type:: Article
Full Text:: , Universidade Federal de Goi�as, Campus II, Caixa Postal 131. Goiânia, GO, 74001-970, Brazil 3 U. S

JeongDoHasslesUplifts.pdf

Creator:: Jeong, Yu-Jin, Aldwin, Carolyn M., Igarashi, Heidi, and Spiro, Avron III
Abstract:: We examined whether longitudinal patterns of hassles and uplifts trajectories predicted mortality, using a sample of 1315 men from the VA Normative Aging Study (mean age = 65.31, SD = 7.6). In prior work, we identified different trajectory classes of hassles and uplifts exposure and intensity scores over a period...
Full Text:: 0 5 10 15 20 25 30 35 40 45 50 55 H as sl es E xp os ur e S co re s 50 55 60 65 70 75

In Vivo Delivery of Morpholino Oligos by Cell-Penetrating Peptides

Creator:: Moulton, Hong M.
Abstract:: Morpholino oligos (Morpholinos) are widely used tools for knocking down gene expression and are currently in a clinical trial for treatment of Duchene muscular dystrophy. A Morpholino analog has been in a clinical trial as a potential anti-bioterrorism agent for inhibiting replication of deadly Marburg viral infection. The cellular uptake...
Resource Type:: Article
Full Text:: , siRNA, and S-DNA compared: impact of structure and mechanism of action on off-target effects and

Geochronology of age-progressive volcanism of the Oregon High Lava Plains : implications for the plume interpretation of Yellowstone

Creator:: Jordan, Brennan T., Grunder, Anita L., Duncan, Robert A., and Deino, Alan L.
Abstract:: The High Lava Plains province (HLP) is a late Cenozoic bimodal volcanic field at the northern margin of the Basin and Range province in southeastern Oregon that hosts a westward younging trend of silicic volcanism that crudely mirrors northeastward migration of silicic volcanism along the Yellowstone–Snake River Plain (YSRP) trend....
Resource Type:: Article
Full Text:: o f th e H ig h L av a P la in s sh o w in g th e d is tr ib u ti o n o f b as al ts . S ee F ig u

Marine bird colony and at-sea distributions along the Oregon coast: Implications for marine spatial planning and information gap analysis

Creator:: Suryan, Robert M., Phillips, Elizabeth M., So, Khemarith, Zamon, Jeannette E., Lowe, Roy W., and Stephensen, Shawn W.
Abstract:: Increasingly diverse interests in commercial and recreational use of marine resources are creating new challenges for coastal ocean management. One concern of increased offshore use and development off the Oregon coast is the potential impact on marine bird populations. We summarized the primary surveys of seabird breeding colonies and at-sea...
Resource Type:: Technical Report
Full Text:: citation(s) referenced for the respective survey program. See Table S1 (Appendix) for various other

Alumni directory of the Oregon Agricultural College, Corvallis, Oregon

Creator:: Oregon Agricultural College
Resource Type:: Book
Full Text:: Ray- (Nee Ray, Ida). Brandon, Lucile (Now Chamberlain, L. '95, B. H. E., D. S. A. Housewife, R. F. D

Do hassles mediate between life events and mortality in older men? Longitudinal findings from the VA Normative Aging Study

Creator:: Aldwin, Carolyn M., Jeong, Yu-Jin, Igarashi, Heidi, Choun, Soyoung, and Spiro, Avron, III
Abstract:: We investigated whether hassles mediated the effect of life events on mortality in a sample of 1293 men (M[subscript age] = 65.58, SD = 7.01), participants in the VA Normative Aging Study. We utilized measures of stressful life events (SLE) and hassles from 1989 to 2004, and men were followed...
Resource Type:: Article
Full Text:: . 80 C.M. Aldwin et al. / Experimental Gerontology 59 (2014) 74–80 Stringhini, S., Batty, G.D., Bovet

The growth of a mountain belt forced by base-level fall: Tectonics and surface processes during the evolution of the Alborz Mountains, N Iran

Creator:: Ballato, Paolo, Landgraf, Angela, Schildgen, Taylor F., Stockli, Daniel F., Fox, Matthew, Ghassemi, Mohammad R., Kirby, Eric, and Strecker, Manfred R.
Abstract:: The idea that climatically modulated erosion may impact orogenic processes has challenged geoscientists for decades. Although modeling studies and physical calculations have provided a solid theoretical basis supporting this interaction, to date, field-based work has produced inconclusive results. The central-western Alborz Mountains in the northern sectors of the Arabia-Eurasia collision...
Resource Type:: Article
Full Text:: al., 2004; Hodges et al., 2004; Reiners and Brandon, 2006). 60 While the first mechanism has proven

compiled_pdf_134_200.pdf

Creator:: Rowe, Michael C.
Abstract:: The primary goal of this study is to assess the impact of a subduction component added to the mantle wedge beneath the Oregon Cascades to the composition and fO2 of primitive Cascade basalts. Olivine-hosted melt inclusions from compositionally diverse basalts across the Cascade arc (~100 km) are utilized in an...
Full Text:: volatile (S,Cl) elements. Beam sizes varied from 4-10 m depending on inclusion size. Olivine grains and

Bacterial Resistance to Antisense Peptide-Phosphorodiamidate Morpholino Oligomers

Creator:: Puckett, Susan E., Reese, Kaleb A., Mitev, Georgi M., Mullen, Valerie, Johnson, Rudd C., Pomraning, Kyle R., Mellbye, Brett L., Tilley, Lucas D., Iversen, Patrick L., Freitag, Michael, and Geller, Bruce L.
Abstract:: Peptide phosphorodiamidate morpholino oligomers (PPMO) are synthetic DNA mimics that bind complementary RNA and inhibit bacterial gene expression. (RFF)₃RXB- AcpP PPMO (R, arginine; F, phenylalanine; X, 6-aminohexanoic acid; B, β-alanine) is complementary to 11 bases of the essential gene acpP (encodes acyl carrier protein). The MIC of (RFF)₃RXB-AcpP was 2.5...
Resource Type:: Article
Full Text:: , Alberti S, and Bengoechea JA. 420 2004. Capsule polysaccharide mediates bacterial resistance to

Ocean Solutions, Earth Solutions

Creator:: Wright, Dawn J.
Abstract:: What affects the oceans affects terra firma. Ocean Solutions, Earth Solutions gathers the insights of more than 50 ocean and coastal science researchers exploring ocean components and their relationships, patterns, and trends over time and space. The book's 16 chapters feature geographic information system (GIS) best practices and include additional...
Resource Type:: Book
Full Text:: OCEAN S O L U T I O N S EARTH S O L U T I O N S Edited by

Honors Link ; Vol. IX (2005)

Creator:: University Honors College
Resource Type:: Other
Full Text:: formal dinner for President Emeritus John Byrne 's leadership class. Honors courses include BA 260H

The Impact of Buffer Zone Size and Management on Illegal Extraction, Park Protection, and Enforcement

Creator:: Robinson, Elizabeth J. Z., Albers, Heidi J., and Busby, Gwenlyn M.
Abstract:: Many protected areas or parks in developing countries have buffer zones at their boundaries to achieve the dual goals of protecting park resources and providing resource benefits to neighbouring people. Despite the prevalence of these zoning policies, few behavioural models of people’s buffer zone use inform the sizing and management...
Resource Type:: Article
Full Text:: Brandon, 1992; Naughton-Treves et al., 2005; Dudley, 2008).1 For example, UNESCO’s Biosphere Reserves

H2O news ; Vol. 4 No. 2 (September 1994)

Creator:: Oregon State University. Water Resources Research Institute
Resource Type:: Book
Full Text:: issue SEARCH INSTITUTE I erence ('akudar S I I I I I I

Alumni directory of the Oregon Agricultural College from 1870 to 1909 inclusive

Creator:: Oregon Agricultural College
Resource Type:: Book
Full Text:: . Allen, '95 Treasurer, Corvallis 1870. James K. P. Currin, B. S. Cottage Grove, Oregon Pharmacist

Influencers: The New Medium of Marketing

Creator:: Schild, Courtney
Resource Type:: Research Paper
Full Text:: . Web. 22 Mar. 2012. . 01 C O U R T N E Y S

Effects of Crop Level on Fruit Composition of Pinot noir Grapes

Creator:: Brasher, Erik and Candolfi-Vasconcelos, M. Carmo
Abstract:: A broad range of factors influences wine grape quality and its manipulation has stimulated interest among grape growers, wine makers, and research scientists alike. One such factor affecting wine grape quality is crop level, particularly for Pinot noir. Since the capacity of a vine to ripen fruit depends largely on...
Resource Type:: Technical Report
Full Text:: , and 3, Ray, Sara `still has her' Finger, PT, Stevo (we miss you), Brandon, Kim Tex, Leah, Sem, Helene

Evaluation of phylloxera-resistant rootstocks for the cultivars Pinot noir, Chardonnay, Pinot gris and Merlot

Creator:: Shaffer, Ray and Candolfi-Vasconcelos, M. Carmo
Abstract:: Vineyard acreage in Oregon continues to increase at a rapid pace. In the past two years alone 1600 acres of new vineyard land have been planted (Rowley et al., 2000). Much of this has been on phylloxera-resistant rootstocks. This practice is strongly encouraged, since it is the only practical way...
Resource Type:: Technical Report
Full Text:: (1991) . Data was collected from 09 :30 h to 14:30 h at photosynthetic flux densities > 1000 umol/m2/s

Forests, farms & people: Land use change on non-federal land in Oregon 1974-2014

Creator:: Gray, Andrew N., Hubner, Dan, Lettman, Gary J., McKay, Neil, and Thompson, Joel L.
Abstract:: Oregon has done remarkably well in preserving forests, farms, and rangeland from development. Ninety-seven percent of all non-Federal land in Oregon that was in resource land uses in 1974 remained in those uses in 2014. Ninety-nine percent of all non-Federal land in Oregon that was in resource land uses in...
Resource Type:: Technical Report
Full Text:: (Alphabetically): Brandon Kaetzel (Oregon Department of Forestry) Katherine Morrison (Oregon Department of

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