Authors listed on this Accepted Manuscript vary slightly from those listed on the Version of Record. Harold L. Gibson is an additional author on the published version.
High purity niobium metal is used in the construction of superconducting radio frequency (SRF) cavities in superconducting particle accelerators, such as the Large Hadron Collider (LHC) at CERN or the Spallation Neutron Source (SNS) at Oak Ridge National Laboratory. The usual method for characterizing the impurities in this niobium, the...
Hot spot–mid-ocean ridge interactions cause many of the largest structural and chemical anomalies in Earth’s ocean basins. Correlated geophysical and geochemical anomalies are widely explained by mantle plumes that deliver hot and compositionally distinct material toward and along mid-ocean ridges. Compositional anomalies are seen in trace element and isotope ratios,...
This summary of the 1958 inspection of the T. J. Starker Post Farm is issued as a supplement to the detailed Progress Report 11, October 1957. Complete Progress reports to be issued at intervals of 2-5 years will describe post series mentioned here and will summarize previous work.
The neon isotope compositions of basalts from the Northwest Lau Back-arc Basin reflect three-component mixing between an ocean island basalt (OIB) mantle hotspot component, mid-ocean ridge basalt (MORB) mantle, and atmosphere. Our study confirms that a mantle hotspot signature is present in the neon isotopes of both the Rochambeau Rifts...
The genus Phytophthora contains some of the most notorious plant pathogens affecting nursery crops. Given the recent emergence of the sudden oak death pathogen Phytophthora ramorum, particularly in association with Rhododendron spp., characterization of Phytophthora communities associated with this host in nursery environments is prudent. Many taxa may present symptoms...
The submarine Amsterdam-St. Paul (ASP) Plateau, bisected by the Southeast Indian Ridge (SEIR), is a bathymetric high rising ~2 km above the surrounding seafloor that includes the islands of Amsterdam and St. Paul; this excess volcanism is attributed to a mantle hot spot. We obtained new Sr, Nd, and Pb...
Halogens are primarily located within surface reservoirs of the Earth; as such they have proven to be effective tracers for the identification of subducted volatiles within the mantle. Subducting lithologies exhibit a wide variety of halogen compositions, yet the mantle maintains a fairly uniform signature, suggesting halogens may be homogenized...
Current anthropogenic pressures drive the widespread loss of apex consumers where the effects of their removal from a system may cascade through lower trophic levels, with unanticipated impacts (Estes et al. 2011; Ripple et al. 2014). Similarly, the observed global decline in large herbivores has complex outcomes for ecosystem functioning...
Phytophthora infestans causes potato late blight, an important and costly disease of potato and tomato crops. Seven clonal lineages of P. infestans identified recently in the United States were tested for baseline sensitivity to six oomycete-targeted fungicides. A subset of the dominant lineages (n = 45) collected between 2004 and...
A 2 week field experiment investigated the hydrodynamics of a strongly tidally forced tropical intertidal reef platform in the Kimberley region of northwestern Australia, where the spring tidal range exceeds 8 m. At this site, the flat and wide (∼1.4 km) reef platform is located slightly above mean sea level,...
Eleven series of untreated posts, 33 series of nonpressuretreated posts, and 13 series of pressure-treated posts remain in test. Series in which all posts have failed now number 34 for untreated, and 18 for nonpressure-treated. Causes of failures since 1949 were: fungi, 77 per cent of failures; fungi and termites,...
Tanoak lumber might supplement the supply of white oak for boat construction, as the tree has extremely thick sapwood that can be pressure- treated readily with preservatives.
One-inch tanoak lumber was kiln -dried to 3 different moisture content ranges, then pressure -treated with water -borne preservatives. Some unseasoned lumber was...
Helium isotopes are a robust geochemical tracer of a primordial mantle component in hot spot volcanism. The high ³He/⁴He (up to 35 RA, where RA is the atmospheric ³He/⁴He ratio of 1.39 X 10¯⁶) of some Hawaiian Island volcanism is perhaps the classic example. New results for picrites and basalts...
The steadily increasing costs of raw materials, of the treated products, and of their replacement in service, as well as the steadily shrinking supply of preferred species, prompted a forum at Oregon State University on May 15, 1973 "to encourage the use of western hemlock and western fuss for poles...
Fishery management production models tend to stress only the elements directly linked to fish (i.e. fish, fish food, and fish predators). Large coastal jellyfish are major consumers of plankton in heavily fished ecosystems; yet, they are frequently not included as model components. We explore the relationship between gulf menhaden (Brevoortia...
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Carassou, L., Hernandez, F. J., Powers, S. P., and Graham, W. M. 2012. Cross‐Shore, seasonal
Fishery management production models tend to stress only the elements directly linked to fish (i.e. fish, fish food, and fish predators). Large coastal jellyfish are major consumers of plankton in heavily fished ecosystems; yet, they are frequently not included as model components. We explore the relationship between gulf menhaden (Brevoortia...
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Love et al. 2013; Wilkinson et al. 1994; Robinson and Dindo 2011; J. Dindo, unpubl. (Dauphin Island Sea
Fishery management production models tend to stress only the elements directly linked to fish (i.e. fish, fish food, and fish predators). Large coastal jellyfish are major consumers of plankton in heavily fished ecosystems; yet, they are frequently not included as model components. We explore the relationship between gulf menhaden (Brevoortia...
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Center,
Newport, OR, USA.
Robinson, K. L., Ruzicka, J. J., Hernandez, F. J., Graham, W. M., Decker, M. B
Fishery management production models tend to stress only the elements directly linked to fish (i.e. fish, fish food, and fish predators). Large coastal jellyfish are major consumers of plankton in heavily fished ecosystems; yet, they are frequently not included as model components. We explore the relationship between gulf menhaden (Brevoortia...
As the Galápagos hot spot is approached from the west along the Galápagos Spreading Center there are systematic increases in crustal thickness and in the K/Ti, Nb/Zr, ³He/⁴He, H₂O, and Na₂O content of lavas recovered from the spreading axis. These increases correlate with progressive transitions from rift valley to axial...
Background: Osteosarcoma (OSA) is the most common primary bone tumor of dogs and carries a poor prognosis
despite aggressive treatment. An improved understanding of the biology of OSA is critically needed to allow for
development of novel diagnostic, prognostic, and therapeutic tools. The surface-exposed proteome (SEP) of a
cancerous cell...
We report here that (4R,9Z)-hexadec-9-en-4-olide [(R)-desmolactone] is a sex
attractant or sex pheromone for multiple species and subspecies in the cerambycid
genus Desmocerus. This compound was previously identified as a female-produced
sex attractant pheromone of Desmocerus californicus californicus.
Headspace volatiles from female Desmocerus aureipennis aureipennis contained
(R)-desmolactone, and the antennae...
We report here that (4R,9Z)-hexadec-9-en-4-olide [(R)-desmolactone] is a sex
attractant or sex pheromone for multiple species and subspecies in the cerambycid
genus Desmocerus. This compound was previously identified as a female-produced
sex attractant pheromone of Desmocerus californicus californicus.
Headspace volatiles from female Desmocerus aureipennis aureipennis contained
(R)-desmolactone, and the antennae...
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. Ray1*, Richard A. Arnold2, Ian Swift3, Philip A. Schapker4, Sean McCann5,
Christopher J. Marshall4, J
We report here that (4R,9Z)-hexadec-9-en-4-olide [(R)-desmolactone] is a sex attractant or sex pheromone for multiple species and subspecies in the cerambycid genus Desmocerus. This compound was previously identified as a female-produced sex attractant pheromone of Desmocerus californicus californicus. Headspace volatiles from female Desmocerus aureipennis aureipennis contained (R)-desmolactone, and the antennae...
A majority of the world’s largest net-based fisheries target planktivorous forage fish that serve as a critical trophic link between the plankton and upper-level consumers such as large predatory fishes, seabirds, and marine mammals. Because the plankton production that drives forage fish also drives jellyfish production, these taxa often overlap...
This project was a continuation of work started by Mark Ingman after he was bothered by the amount of plastic sheeting used in agriculture in China. He was determined to develop an alternative to this environmentally destructive use of plastic by farmers. The plastic “mulch” is used to prevent weeds...
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Clark, Dustin DeGeorge, Kara DiFrancesco, Alison Doniger, Ian Garretson, Courtney Holley, Mark Ingman
This project was a continuation of work started by Mark Ingman after he was bothered by the amount of plastic sheeting used in agriculture in China. He was determined to develop an alternative to this environmentally destructive use of plastic by farmers. The plastic “mulch” is used to prevent weeds...
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, Dustin DeGeorge, Kara DiFrancesco, Alison Doniger, Ian Garretson, Courtney Holley, Mark Ingman, Grant
This project was a continuation of work started by Mark Ingman after he was bothered by the amount of plastic sheeting used in agriculture in China. He was determined to develop an alternative to this environmentally destructive use of plastic by farmers. The plastic “mulch” is used to prevent weeds...
Coibamide A is an N-methyl-stabilized depsipeptide that was isolated from a marine cyanobacterium as part of an International Cooperative Biodiversity Groups (ICBG) program based in Panama. Previous testing of coibamide A in the NCI in vitro 60 cancer cell line panel revealed a potent anti-proliferative response and "COMPARE-negative" profile indicative...
Background: Epidemiologic studies of skin and soft tissue infections (SSTIs) depend upon accurate case identification. Our objective was to evaluate the positive predictive value (PPV) of electronic medical record data for identification of SSTIs in a primary care setting. Methods: A validation study was conducted among primary care outpatients in...
Biophysical studies of the interaction of peptides with model membranes provide a simple yet effective approach to understand the transport of peptides and peptide based drug carriers across the cell membrane. Herein, the authors discuss the use of self-assembled monolayers fabricated from the full membrane-spanning thiol (FMST) 3-((14-((40-((5-methyl-1-phenyl-35-(phytanyl)oxy- 6,9,12,15,18,21,24,27,30,33,37-undecaoxa-2,3-dithiahenpentacontan-51-yl)oxy)-[1,10-biphenyl]-4- yl)oxy)tetradecyl)oxy)-2-(phytanyl)oxy...
To predict future coastal hazards, it is important to quantify any links between climate drivers and spatial patterns of coastal change. However, most studies of future coastal vulnerability do not account for the dynamic components of coastal water levels during storms, notably wave-driven processes, storm surges and seasonal water level...
The construction of the first genetic map in autotetraploid blueberry has been made possible by the development of new SNP markers developed using genotyping by sequencing in a mapping population created from a cross between two key highbush blueberry cultivars, Draper × Jewel (Vaccinium corymbosum). The novel SNP markers were...
The construction of the first genetic map in autotetraploid blueberry has been made possible by the development of new SNP markers developed using genotyping by sequencing in a mapping population created from a cross between two key highbush blueberry cultivars, Draper × Jewel (Vaccinium corymbosum). The novel SNP markers were...
The construction of the first genetic map in autotetraploid blueberry has been made possible by the development of new SNP markers developed using genotyping by sequencing in a mapping population created from a cross between two key highbush blueberry cultivars, Draper × Jewel (Vaccinium corymbosum). The novel SNP markers were...
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The construction of the first genetic map in autotetraploid blueberry has been made possible by the development of new SNP markers developed using genotyping by sequencing in a mapping population created from a cross between two key highbush blueberry cultivars, Draper × Jewel (Vaccinium corymbosum). The novel SNP markers were...
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McCallum . Julie Graham . Linzi Jorgensen . Lisa J. Rowland .
Nahla V. Bassil . James F. Hancock . Edmund
The construction of the first genetic map in autotetraploid blueberry has been made possible by the development of new SNP markers developed using genotyping by sequencing in a mapping population created from a cross between two key highbush blueberry cultivars, Draper × Jewel (Vaccinium corymbosum). The novel SNP markers were...
A case study of new particle formation in the region downwind of a mesoscale convective system stretching across much of the central United States is presented. Airborne measurements were made of condensation nuclei (CN), cloud particle surface area, water vapor, and other gases. CN concentrations were greatly enhanced above and...
The Moderate Resolution Imaging Spectroradiometer (MODIS) will add a significant new capability for investigating the 70% of the Earth's surface that is covered by oceans, in addition to contributing to the continuation of a decadal scale time series necessary for climate change assessment in the oceans. Sensor capabilities of particular...
In 2007, the US west coast shellfish industry began to feel the effects of unprecedented levels of larval mortality in commercial hatcheries producing the Pacific oyster Crassostrea gigas. Subsequently, researchers at Whiskey Creek Shellfish Hatchery, working with academic and government scientists, showed a high correlation between aragonite saturation state (Ω[subscript]arag)...
Numerous monitoring efforts are underway to improve understanding of ocean acidification and its impacts on coastal environments, but there is a need to develop a coordinated approach that facilitates spatial and temporal comparisons of drivers and responses on a regional scale. Toward that goal, the California Current Acidification Network (C-CAN)...
Agricultural land management, such as fertilization, liming, and tillage affects soil properties, including pH, organic matter content, nitrification rates, and the microbial community. Three different study sites were used to identify microorganisms that correlate with agricultural land use and to determine which factors regulate the relative abundance of the microbial...
Terrestrial biosphere models can help identify physical processes that control carbon
dynamics, including land–atmosphere CO₂ fluxes, and have great potential to predict the terrestrial
ecosystem response to changing climate. The skill of models that provide continental-scale carbon flux
estimates, however, remains largely untested. This paper evaluates the performance of continental-scale...
We develop an approach for estimating net ecosystem exchange (NEE) using inventory-based information over North America (NA) for a recent 7-year period (ca. 2000–2006). The approach notably retains information on the spatial distribution of NEE, or the vertical exchange between land and atmosphere of all non-fossil fuel sources and sinks...
Earth system processes exhibit complex patterns across time, as do the models that seek to replicate these processes. Model output may or may not be significantly related to observations at different times and on different frequencies. Conventional model diagnostics provide an aggregate view of model–data agreement, but usually do not...
In the North Atlantic, cold, relatively salty water sinks in the icy Labrador and Greenland seas, forming North Atlantic Deep Water (NADW). This circulates through the global ocean, driving ocean overturning and global heat transport and, thus, impacting global climate. As one of the most climatically sensitive regions on Earth,...
Engaging large numbers of undergraduates in authentic scientific discovery is desirable but difficult to achieve. We
have developed a general model in which faculty and teaching assistants from diverse academic institutions are trained to teach a
research course for first-year undergraduate students focused on bacteriophage discovery and genomics. The course...
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., Carson, S., Caruso, S. M., Clase, K., DeJong, R.
J., ... & Hatfull, G. F. (2014). A Broadly
Engaging large numbers of undergraduates in authentic scientific discovery is desirable but difficult to achieve. We
have developed a general model in which faculty and teaching assistants from diverse academic institutions are trained to teach a
research course for first-year undergraduate students focused on bacteriophage discovery and genomics. The course...
Engaging large numbers of undergraduates in authentic scientific discovery is desirable but difficult to achieve. We
have developed a general model in which faculty and teaching assistants from diverse academic institutions are trained to teach a
research course for first-year undergraduate students focused on bacteriophage discovery and genomics. The course...
We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
Accurately simulating gross primary productivity (GPP) in terrestrial ecosystem models is critical because errors in simulated GPP propagate through the model to introduce additional errors in simulated biomass and other fluxes. We evaluated simulated, daily average GPP from 26 models against estimated GPP at 39 eddy covariance flux tower sites...