Keywords: Invertebrate Zoology 451-452; Anthopleura elegantissima; Anthopleura xanthogrammica; Intertidal organisms; Coelenerates; Sea anemones; Nye Beach, Newport, Oregon; Boiler Bay, Depoe Bay, Oregon; Yaquina Head
The continuous-time mathematics of a binary-decision making neuromime are presented. The model, generally describable as a simplification of the Hodgkin-Huxley model, seeks to mimic many properties of biological neurons including spatial and temporal summation of excitatory and inhibitory inputs, action potential evolution controlled by countervailing charge movements, and postinhibitory rebound...
The inert gas ion bombardment of solid surfaces has
found many uses in the field of analytical chemistry. In
one method of spectrochemical analysis, inert gas ion
bombardment in a glow discharge is used to produce an atomic
vapor, representative of the sample bulk, which is analyzed
using atomic absorption...
Optimal well placement and optimal well control are two important areas of study in oilfield development. Although the two problems differ in several respects, both are important considerations in optimizing total oilfield production, and so recent work in the field has considered the problem of addressing both problems jointly. Two...
The time evolution of mixing in turbulent overturns is investigated using a combination of direct numerical simulations (DNS) and microstructure profiles obtained during two field experiments. The focus is on the flux coefficient Γ, the ratio of the turbulent buoyancy flux to the turbulent kinetic energy dissipation rate ϵ. In...
Patterns of β diversity are commonly used to infer underlying ecological processes. In this study, we examined the effect of spatial configuration of habitat capacity on different metrics of β diversity, i.e., β diversity measured as turnover and as variation. For β diversity as turnover, a monotonic species spatial turnover...
In spite of the effects of several form of temporal variability that tend to mask geographical patterns in turbulence intensity, our evidence indicates that the turbulence is enhanced above the equatorial undercurrent in comparison to latitudes north and south of it. This evidence consists of three meridional transects of micro-structure...
The vapor-drying process is described briefly and its present status in industry is discussed. Fairly extensive data on the vapor drying of 1-, 2-, and 4-inch Douglas-fir and 2-inch western hemlock lumber are presented. Exploratory work on the vapor drying of redwood, Pacific madrone, red alder and ponderosa pine is...
Mountain pine beetle developed to epidemic levels in lodgepole pine stands in the Thompson River drainage in 1971. Approximately 506,616 trees are infested on 4,444 hectares. Based on buildup ratios, infestations are expected to intensify; develop in uninfected stands; and kill about 1,763,024 trees in 1977. Salvage logging of infested...
Juvenile salmonids display highly variable spatial and temporal patterns of early dispersal that are influenced by density-dependent and density-independent factors.
Although juvenile coho salmon (Oncorhynchus kisutch) movement patterns in streams and their relationship with body mass and growth have been examined in previous studies, most observations were limited to one...
Interaction between mixed layer baroclinic eddies and small-scale turbulence is studied using a nonhydrostatic large-eddy simulation (LES) model. Free, unforced flow evolution is considered, for a standard initialization consisting of an 80-m-deep mixed layer with a superposed warm filament and two frontal interfaces in geostrophic balance, on a model domain...
Subsurface temperature data and surface meteorological data are analyzed from thermistor chain moorings deployed near 50°N, 140°W during the Storm Transfer and Response Experiment (STREX). The upper-ocean heat and potential energy (PE) contents to 90 m are examined for an 18-day period and their changes compared to the sources and...
This article presents a semianalytic method to investigate the properties of energy transmission across bottom topography by barotropic Rossby waves. The method is first used to revisit the analytical estimates derived from wave-matching techniques and Wentzel–Kramers–Brillouin (WKB) approximations. The comparison between the semianalytic method and WKB indicates that the results...
Here we document introns in two Symbiodinium clades that were most likely gained following divergence of this genus
from other peridinin-containing dinoflagellate lineages. Soluble peridinin-chlorophyll a-proteins (sPCP) occur in short and
long forms in different species. Duplication and fusion of short sPCP genes produced long sPCP genes. All short and...
Here we document introns in two Symbiodinium clades that were most likely gained following divergence of this genus
from other peridinin-containing dinoflagellate lineages. Soluble peridinin-chlorophyll a-proteins (sPCP) occur in short and
long forms in different species. Duplication and fusion of short sPCP genes produced long sPCP genes. All short and...
Full Text:
Radiation of
Symbiodinium (Dinophyceae) Clade A and B Lineages
Reichman, J. R., Vize, P. D. (2014
Riverine plumes in nearshore coastal waters are areas of enhanced production and accumulation of prey and may increase availability of food during a critical period of juvenile salmon survival and hence serve as a nursery area for these juveniles. Physical and biological sampling was conducted along a cross-shelf transect through...
Correction:
21 Jan 2015: The PLOS ONE Staff (2015) Correction: Separate Introns Gained within Short and Long Soluble Peridinin-Chlorophyll a-Protein Genes during Radiation of Symbiodinium (Dinophyceae) Clade A and B Lineages. PLOS ONE 10(1): e0117735. https://doi.org/10.1371/journal.pone.0117735
Observations of Earth’s magnetic field extending back to 3.45 billion years ago indicate that generation by a core dynamo must be sustained over most of Earth’s history. However, recent estimates of thermal and electrical conductivity of liquid iron at core conditions from mineral physics experiments indicate that adiabatic heat flux...
Reed canarygrass (Phalaris arundinacea L.) is a desirable pasture
grass on wet areas in the Northern United States and Southern Canada,
but it is a serious and troublesome ditchbank weed in the Pacific Northwest
and Rocky Mountain States. The purpose of this study was to learn
more about the development,...
Vertically propagating coastal internal Kelvin waves (IKWs) forward by the alongshore component of the wind at the coast are studied, utilizing an ƒ-plane model of a continuously stratified ocean with a vertical eastern boundary. With an infinitely deep ocean, several initial value problems that illustrate the basic properties of the...
A previously undescribed system of differential food
storage in replete forms of the honey ant, Myrmecocystus
mexicanus Wesmael, is reported. Certain repletes store lipid as glycerol and cholesterol esters associated with
sugar solutions containing glucose, fructose, and maltose.
We use data from a series of small (three to five stations) overlapping magnetovariational (MV) arrays to image variations of vertically integrated electrical conductivity in the crust of southwestern Washington. Two principal structures are revealed: a large north-south trending anomaly (the southern Washington Cascades Conductor (SWCC), which has been detected...
In a companion paper (Egbert et al., this issue) we describe the estimation of very long period (0.16 < T < 91 days) magnetotelluric (MT) impedances from 11 years of data collected at the Tucson geomagnetic observatory. Here we discuss the implications of these data for mantle conductivity. Using minimum...
Pacific Northwest trawl fishermen spend an estimated $625,000 every year to replace corroded trawl cable. If the Pacific Northwest shrimp fleet is included, the yearly cost greatly exceeds one million dollars. Fishermen could save hundreds of thousands of dollars and increase the net return to the individual fisherman if they...
One of a series of Chesapeake Outflow Plume Experiments, COPE-2, was conducted in May 1997 along the coast of Virginia/North Carolina. The objective of this experiment was to describe the coastal buoyancy jet formed by the outflow of water from Chesapeake Bay, its dispersion into midshelf, and the optical property...
Simulations with a Mars general circulation model (GCM) are used to perform idealized tracer transport experiments, which are analyzed to yield estimates of eddy mixing coefficients as well as “stratospheric” ventilation timescales for the zonal-mean circulation. The results indicate that relatively moderate values of the vertical eddy mixing coefficient, KZ...
Our primary purpose in developing this instrument is to measure
vertical temperature fluctuations in the ocean to the smallest scales at
which they exist. This goal dictates the basic concept of the instrument,
as C. S. Cox saw in the 1960's. Vertical temperature changes are seen
as changes with time...
Globally, mangrove forests represents only 0.7% of world's tropical forested area but are highly threatened due to susceptibility to climate change, sea level rise, and increasing pressures from human population growth in coastal regions. Our study was carried out in the Bhitarkanika Conservation Area (BCA), the second-largest mangrove area in...
Amphorophora agathonica (Hottes) is the primary vector of aphid-transmitted viruses in red raspberry in the Pacific Northwest region of the United States. To better understand the biology of the aphid, we estimated the lower developmental threshold and studied the seasonal activity of A. agathonica in commercial fields in northern Washington...
Refractive indices of In₂O₃, In₂₋ₓSnₓO₃, InBO₃ and 2 different gahnite crystals (ZnAl₂O₄ and Zn.₉₅Fe.₀₅Al₂O₄) were measured at wavelengths of 435.8 to 643.8 nm and were used to calculate n at λ = 589.3 nm ( nD ) and at λ = ∞ (n∞) using the one-term Sellmeier equation 1/(n²-1) =...
A laboratory instrument, the Natural Fluorescence Chemostat, was developed to measure the natural fluorescence of phytoplankton cultures. With this instrument, the physical and chemical environment of a culture can be manipulated with respect to temperature, pH, nutrient delivery rate, and light intensity, while the natural fluorescence and a weak stimulated...
Observations of mixing over the continental slope using a towed body reveal a great lateral extent (several kilometers) of continuously turbulent fluid within a few hundred meters of the boundary at depth 1600 m. The largest turbulent dissipation rates were observed over a 5 km horizontal region near a slope...
We have constructed an automated routine to identify prominent bursts of tectonic tremor and locate their source region during time periods of raised amplitude in the tremor passband. This approach characterizes 62 episodes of tectonic tremor between 2005 and 2011, with tremor epicenters forming a narrow band spanning the entire...
This paper presents the results from the Deflo-hydroacoustic experiment in the Southern Indian Ocean using three autonomous underwater hydrophones, complemented by two permanent hydroacoustic stations. The array monitored for 14 months, from November 2006 to December 2007, a 3000 x 3000 km wide area, encompassing large segments of the three...
Temperature, salinity, density and turbulent dissipation profiles measured using the Rapid Sampling Vertical Profiler during the Coastal Transition Zone Experiment, July 1988.
The tachinid species Ormia Dominicana, Ormia lineifrons, and Sitophaga aurigera were observed to aggregate atop 2 towers in central Florida shortly after sunset. The activity period for each species was brief, and that of 0. dominicana was temporally separated from that of S. aurigera. Aggregations occasionally exceeded 100 individuals of...
The following is a report on a limited survey we conducted testing for the presence of Mesurol (Methiocarb) in Oregon wines. This study was undertaken as a result of recent publicity (resulting from testing in British Columbia) concerning the finding of Methiocarb residues in some wines, including Oregon wines; and...
Recent advances in microbiology techniques, such as genetic sequencing, allow for rapid and cost-effective collection of large quantities of genetic information carried within water samples. Here we posit that the unique composition of aquatic DNA material within a water sample contains relevant information about hydrologic function at multiple temporal scales....