Two TaqMan-based real-time One-Step RT-PCR assays were developed for the rapid and efficient detection
of Raspberry bushy dwarf virus (RBDV) and Raspberry leaf mottle virus (RLMV), two of the most common
raspberry viruses in North America and Europe. The primers and probes were designed from conserved
fragments of the polymerase...
Raspberry latent virus (RpLV) is a newly characterized reovirus found in commercial raspberry fields in the Pacific Northwest (PNW). Thus far, all members of the plant reoviruses are transmitted in a replicative, persistent manner by several species of leafhoppers or planthoppers. After several failed attempts to transmit RpLV using leafhoppers,...
Published September 2009. A more recent revision exists. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Reviewed July 2009. A more recent revision exists. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Virus-infected plants accumulate abundant, 21–24 nucleotide viral siRNAs which are generated by the evolutionary
conserved RNA interference (RNAi) machinery that regulates gene expression and defends against invasive nucleic acids.
Here we show that, similar to RNA viruses, the entire genome sequences of DNA viruses are densely covered with siRNAs in...
Full Text:
and DNA Viruses from siRNAs
Seguin J, Rajeswaran R, Malpica-López N, Martin RR, Kasschau K, et al
Virus-infected plants accumulate abundant, 21–24 nucleotide viral siRNAs which are generated by the evolutionary
conserved RNA interference (RNAi) machinery that regulates gene expression and defends against invasive nucleic acids.
Here we show that, similar to RNA viruses, the entire genome sequences of DNA viruses are densely covered with siRNAs in...
Virus-infected plants accumulate abundant, 21–24 nucleotide viral siRNAs which are generated by the evolutionary conserved RNA interference (RNAi) machinery that regulates gene expression and defends against invasive nucleic acids. Here we show that, similar to RNA viruses, the entire genome sequences of DNA viruses are densely covered with siRNAs in...
This publication reviews the growth stages of grapes. For each growth stage (or group of growth stages), the document lists the more effective pesticides used to control insects and disease, their rates, and application timing for Oregon grape growers. It also covers the effectiveness of various fungicides for control of...
This publication reviews the growth stages of grapes. For each growth stage (or group of growth stages), the document lists the more effective pesticides used to control insects, weeds, and disease, their rates, and application timing for Oregon grape growers. It also covers the effectiveness of various fungicides for control...
This publication reviews the growth stages of grapes. For each growth stage (or group of growth stages), the document lists the more effective pesticides used to control insects and disease, their rates, and application timing for Oregon grape growers. It also covers the effectiveness of various fungicides for control of...
We estimate the depth of the 120°C isotherm by constructing crustal thermal gradients based on theoretical and observed conductive heat flux as a function of lithospheric age. We chose the 120°C isotherm because it is close to the upper limit for prokaryotic life, and therefore, the isotherm approximates the maximum...
Much has been written concerning the establishment and improvement
of the athletic program in large high schools. However, much of that
which is applicable to large high schools is not applicable to the smaller
institutions.
The chief purposes of this study were to explore the athletic equipment
problems of the...
When land use issues are voted upon directly by the people, or by
the legislators who represent them, the outcome often reveals a discrepancy
based on population density. Urban-suburban areas tend to
support regulation, while rural areas tend to oppose it. The residents
of Clackamas County have voted on two...
Glacial sedimentary sequences in the north central United States record multiple advances of the
Laurentide Ice Sheet (LIS) since ~2 Ma. Although the tills found in these sequences were deposited by
southward flowing glacial lobes, little information is available on the geometry of flow lines in the interior
of the...
The island of Tahiti, the largest in French Polynesia, comprises two major volcanoes aligned NW-SE, parallel with the general trend of the Society Islands hotspot track. Rocks form this volcanic system are basalts transitional to tholeiites, alkali basalts, basanites, picrites, and evolved lavas. Through K-Ar radiometric dating we have established...
The present study examined involuntary attentional bias toward facial emotion expression. Particularly, the study examined two different attentional components for emotional processing, namely, orienting vs. disengagement. A cueing paradigm using two cue presentation times (250ms and 350ms) was used to determine if attention would be involuntarily captured by an irrelevant...
I. REPRODUCTION AND LAMB PRODUCTION Relationships among hemoglobin (Hb) genotypes and reproduction and production traits were examined in 294 four- and five-year-old North Country Cheviot, Dorset, Finnsheep or Romney x Suffolk or Columbia-type crossbred ewes. Hb BB ewe lambs were youngest at first estrus and Hb AA ewe lambs were...
The interaction of basalt melt with mantle harzburgite at low pressure might result in silica enrichment of the melt by assimilation of orthopyroxene. Experimental tests of this hypothesis show that silica-rich liquids (56 wt %) are produced by melt-orthopyroxene reaction at 1200° to 1250°C. These silica-rich liquids are enriched in...
OBJECTIVE: To test a theory-driven model of health behavior to predict the illicit use of
prescription stimulants (IUPS) among college students. PARTICIPANTS: A probability sample of
554 students from one university located in California (response rate = 90.52%).
METHODS: Students completed a paper-based survey developed with guidance from the Theory...
We propose alternative mechanisms for the origin of three unusual rock suites, high-Mg andesites, NaTi basalts, and arclike rocks, that have been dredged from the Woodlark basin, southwest Pacific Ocean. We show that the high-Mg andesites and NaTi basalts are associated with an unusually cool ridge environment. The cooling is...
Published December 1932. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Hydrothermal vents appear to be the tip of the subsurface biosphere in the ocean crust. The primary prducers in this biosphere are prokaryotes that tolerate a wide variety of physical and chemical conditions and are versatile in their use of inorganic compounds to drive metabolism. A synthesis of chemical and...
These first measurements of specific surface area (SSA)
of bulk samples of subsurface marine basalts were undertaken
to determine the potential area available for microbial
colonization. SSA ranged from 0.3 to 52 m2/g of basalt
with the lowest value coming from pillow basalt and the
highest value from breccia. The...
The alteration of subseafloor volcanic glass from three locations is qualitatively attributed to biological
(biotic) or chemical (abiotic) reactions on the basis of microscopic morphology of the boundary between
the unaltered and altered glass. Eleven-element composition of fresh basalt glass (sideromelane) and its
alteration products were determined by electron microprobe....
Twelve Sri Lankan Alfisols were characterized for P. Soils
were incubated for three weeks with sufficient P applied
(P2) to elevate soil solution P to 0.2 ug P/g solution as
determined by sorption curves, with 75 percent of P2 (P1),
and without P (P0). For PO treatments, (a) organic P,...
This report describes the latest in a series of studies sponsored by the Nationwide Forestry Applications Program. Each such study has attempted to enhance the interpretability of remotely-sensed imagery. In this case the image type of specific interest is high-altitude color infrared (CIR) photography. This is a resource management tool...
Oxygen derived radicals are involved in many aspects of life from aging and cell signaling to disease states as diverse as heart disease, diabetes, neurodegeneration and inflammation. Therefore, understanding the function of antioxidant defense proteins and the effects of oxygen derived radicals on protein function is essential to elucidate the...
The response of tidal and residual currents to small scale morphological differences over abrupt
deep sea topography (Seine Seamount) was estimated for bathymetry grids of different spatial
resolution. Local barotropic tidal model solutions were obtained for three popular and publicly
available bathymetry grids (Smith and Sandwell TOPO8.2, ETOPO1 and GEBCO08)...
Background: Few studies examining the associations between long-term exposure to ambient air pollution and mortality have considered multiple pollutants when assessing changes in exposure due to residential mobility during follow-up.
Objective: We investigated associations between cause-specific mortality and ambient concentrations of fine particulate matter (≤ 2.5 μm; PM₂.₅), ozone (O₃),...
Full Text:
. Peters, Perry Hystad, Jeffrey R. Brook, Aaron van Donkelaar, Randall V.
Martin, Paul J. Villeneuve
Background: Few studies examining the associations between long-term exposure to ambient air pollution and mortality have considered multiple pollutants when assessing changes in exposure due to residential mobility during follow-up.
Objective: We investigated associations between cause-specific mortality and ambient concentrations of fine particulate matter (≤ 2.5 μm; PM₂.₅), ozone (O₃),...
Full Text:
, J. R., van Donkelaar, A., Martin, R.
V., ... & Burnett, R. T. (2015). Ambient PM₂.₅, O₃, and NO
Background: Few studies examining the associations between long-term exposure to ambient air pollution and mortality have considered multiple pollutants when assessing changes in exposure due to residential mobility during follow-up.
Objective: We investigated associations between cause-specific mortality and ambient concentrations of fine particulate matter (≤ 2.5 μm; PM₂.₅), ozone (O₃),...
Secondary plant succession and the accumulation of biomass and nutrients were documented at seven ruminant exclosures in Abies and Pseudotsuga forests variously disturbed by logging, burning, and grass seeding. Long-term (25 or more years) foraging by Rocky Mountain mule deer (Odocolleus hemionus) and Rocky Mountain elk (Genius elaphus) suppressed the...
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Microchannels in ocean basalt glass are often attributed to the activity of microorganisms, however, neither the mechanism of formation of microchannels in glass nor the involvement of microorganisms have been confirmed by experimentation. Experimental abiotic corrosion of basalt glass with 1% hydrofluoric acid (HF), a proxy for more slowly acting...
Internal controls have often been thought of as specific activities that are performed to ensure accounting transactions have been recorded properly and to ensure security over assets. This definition was supplemented in a previous monograph on internal controls, "Accounting Controls for a Forest Products Firm," published in January 1981 ....
Vegetation ecology of eight Oregon freshwater wetlands was
described and net aerial primary productivity estimated in four
wetlands. Plant cover samples were used to classify 37 wetland and
11 terrestrial communities by agglomerative hierarchical clustering.
Samples and species were ordinated. Direct measurements were made
of sample relative elevation, inundation duration,...
Cyclopropenoid fatty acids (CPFA), which are a group of
fatty acids produced by plants of the order Malvales, are known
to induce adverse physiological effects when administered to a
variety of animal species. A structurally strained cyclopropene
ring is present in all CPFA and is believed responsible for the
toxic...
Marine sediments around volcanic islands contain an archive of volcaniclastic deposits, which can be used to reconstruct the volcanic history of an area. Such records hold many advantages over often incomplete terrestrial data sets. This includes the potential for precise and continuous dating of intervening sediment packages, which allow a...
Cocksfoot mottle virus (CfMV) is a mechanically and beetle-transmitted, non-seedtransmitted
sobemovirus associated with orchardgrass (Dactylis glomerata L.) stand decline
in Europe, Japan, New Zealand (Mahy and Van Regenmortel 2010), and Canada (Bittman
et al. 2006). Additional hosts, reported from New Zealand (Delmiglio et al. 2010), include
Festuca novae-zelandiae, Lolium spp.,...
Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Amphorophora agathonica (Hottes) is the primary vector of aphid-transmitted viruses in red raspberry in the Pacific Northwest region of the United States. To better understand the biology of the aphid, we estimated the lower developmental threshold and studied the seasonal activity of A. agathonica in commercial fields in northern Washington...
Using temperature gradients measured in 10 holes at 6 sites, we generate the first high fidelity heat flow measurements from Integrated Ocean Drilling Program drill holes across the northern and central Lesser Antilles arc and back arc Grenada basin. The implied heat flow, after correcting for bathymetry and sedimentation effects,...
Reservoirs are artificial ecosystems with multiple functions having direct and indirect benefits to humans; however, they also cause ecological changes and influence the composition and structure of aquatic biota. Our objectives were to: (1) assess the environmental condition of Nova Ponte Reservoir, Minas Gerais state, southeastern Brazil; and (2) determine...
The objective of this study was to quantify understory species diversity response to overstory manipulation of Blue Mountain eco-region forest. Forty nine ecological land units, including differing successional stages (sapling, pole, small saw, and saw log) and canopy cover (light and medium) in dry Grand Fir (Abies grandis), wet Grand...
The objective of this study was to quantify understory vegetation response to overstory manipulation of Blue Mountain eco-region forest. Forty nine ecological land units, including differing successional stages (sapling, pole, small saw, and saw log) and canopy cover (light and medium) in dry Grand Fir (Abies grandis), wet Grand Fir,...
When characterizing the processes that shape ecosystems, ecologists increasingly use the unique perspective offered by repeat observations of remotely sensed imagery. However, the concept of change embodied in much of the traditional remote-sensing literature was primarily limited to capturing large or extreme changes occurring in natural systems, omitting many more...
Analysis of simulations performed with the NASA/Ames Mars GCM shows that under dusty conditions the Northern Hemisphere winter solstice circulation becomes characterized by a zonally averaged state in which the potential vorticity at upper levels is very small outside of high latitudes. The available observational data-in particular the 15-µm observations...
Annual recruitment of the New Zealand longfin eel (Anguilla dieffenbachii) has decreased by around 75 percent since heavy levels of commercial fishing began in the early 1970s. Given the unsustainability of existing regulatory policy, a deterministic multiple-cohort bioeconomic model is developed and applied to this system to gain insight into...
The flight behavior of Ips confusus (Lec.) was primarily
studied under field conditions, but augmented with
complementary laboratory studies whenever feasible. The
experiments were mostly conducted in areas of endemic population
levels, but also under epidemic and prairie conditions.
The techniques and devices used in marking, releasing,
attracting, and trapping...
A vegetation classification based on concepts and methods developed by Daubenmire was used to identify five habitat types and their related phases on the Medicine Bow National Forest: Abies lasiocarpa/Vaccinium scoparium, including the Pinus contorta/Vaccinium scoparium community; Abies lasiocarpa/Carex geyeri, including the Pinus contorta/Carex geyeri community; Populus tremuloides/Carex geyeri; Pinus...
Management factors used for studies on potato scab
control were evaluated for their effect on tuber russeting
and related biochemical and anatomical parameters
during 1971 and 1972.
Russet Burbank potatoes were irrigated in 1971 to
maintain high available soil moisture (between 90% and
field capacity) for 0, 3, 6 and...
Current observations were obtained at three locations forming
a cross section along 70°34'W longitude in Long Island Sound. Fifteen
days of data were selected from each series so that nearly
simultaneous observations were used in the analysis.
Elementary statistics were computed for the data prior to
performing a least squares...
A tidal and sea level survey was begun in Yaquina Bay, Oregon,
on 8 May, 1964. A continuous recording tide gage was installed at
the pier of the Oregon State University Marine Science Center.
An harmonic analysis of the observed data was made, and the
major tidal constants were compared...
Pacific Northwest trawl fishermen spend an estimated $625,000 every year to replace corroded trawl cable. If the Pacific Northwest shrimp fleet is included, the yearly cost greatly exceeds one million dollars. Fishermen could save hundreds of thousands of dollars and increase the net return to the individual fisherman if they...
For twenty-two years, I observed trees and shrubs planted for windbreaks in eastern Oregon. In this paper some conclusions are drawn, although I will be the first to emphasize that the knowledge we need and do not have would fill a much more extensive report. My observations and field work...
In some species, sperm is stored within the female reproductive tract for months to years, and yet remains viable to fertilize eggs and produce offspring. Female red-sided garter snakes store sperm for over seven months of winter dormancy. In previous work we demonstrated that these stored sperm account for an...
Photosynthetic diatoms and marine bacteria contribute about one third of the net primary production in marine environments. Understanding the interactions between these two organisms is potentially important to the over all flow of carbon in the marine ecosystem.
We investigate the utility of adding a 365 nm ultraviolet (UV) light source to the ExoMars panoramic camera (PanCam) scheduled for launch in 2013. The modification makes it feasible to monitor rover drill cuttings for aromatic organic molecules and provide constraints on polycyclic aromatic hydrocarbons (PAH) as a function of...
During Leg 168 of the Ocean Drilling Program, basalts were recovered by drilling and subsurface water was collected with a water sampling tool at Hole 1026B on the east flank of Juan de Fuca Ridge. Microorganisms were found in both types of samples. The microorganisms in the basalt appear to...
Animal and plant species differ dramatically in their quality as hosts for multi-host pathogens, but the causes of this
variation are poorly understood. A group of small mammals, including small rodents and shrews, are among the most
competent natural reservoirs for three tick-borne zoonotic pathogens, Borrelia burgdorferi, Babesia microti, and...
Animal and plant species differ dramatically in their quality as hosts for multi-host pathogens, but the causes of this
variation are poorly understood. A group of small mammals, including small rodents and shrews, are among the most
competent natural reservoirs for three tick-borne zoonotic pathogens, Borrelia burgdorferi, Babesia microti, and...
Full Text:
Competence for
Three Tick-Borne Zoonotic Pathogens
Ostfeld, R. S., Levi, T., Jolles, A. E., Martin, L. B
The boundary between ice and basalt on Earth is an analog for some near-surface environments of Mars. We investigated neutrophilic iron-oxidizing microorganisms from the basalt-ice interface in a lava tube from the Oregon Cascades with perennial ice. One of the isolates (Pseudomonas sp. HerB) can use ferrous iron Fe(II) from...
Full Text:
-Ice Interface
in a Lava-Tube Cave, a Mars Analog Environment
Radu Popa,1 Amy R. Smith,1 Rodica Popa,1
The boundary between ice and basalt on Earth is an analog for some near-surface environments of Mars. We investigated neutrophilic iron-oxidizing microorganisms from the basalt-ice interface in a lava tube from the Oregon Cascades with perennial ice. One of the isolates (Pseudomonas sp. HerB) can use ferrous iron Fe(II) from...
Full Text:
, Martin
Oregon State University, College of Oceanic and Atmospheric Science
This
This paper explores the development of biomechanical models for evaluating a new class of passive mechanical implants for orthopedic surgery. The proposed implants take the form of passive engineered mechanisms, and will be used to improve the functional attachment of muscles to tendons and bone by modifying the transmission of...
Animal and plant species differ dramatically in their quality as hosts for multi-host pathogens, but the causes of this variation are poorly understood. A group of small mammals, including small rodents and shrews, are among the most competent natural reservoirs for three tick-borne zoonotic pathogens, Borrelia burgdorferi, Babesia microti, and...