Adsorbed molecules are involved in many reactions on solid surfaces that are of great technological
importance. As such, there has been tremendous effort worldwide to learn how to theoretically
predict rates for reactions involving adsorbed molecules. Theoretical calculations of rate constants
require knowing both their activation energy and prefactor. Recent...
Every cell is faced continuously with the task of transducing a vast number of external signals into appropriate intracellular responses. In mammalian cells, membrane bound receptors modulate the production of secondary messenger molecules, such as cyclic AMP (cAMP). Cell signaling through second messengers relies on the diffusion of such second...
In the field of civil infrastructure, bridge desks are typically constructed using high performance concrete (HPC). Concrete bridge decks demand qualities such as low permeability, high abrasion resistance, superior durability, and long design life. Over decades of field and laboratory experience, many HPC bridge decks have been found to be...
High Performance Concrete (HPC) is used in our crucial pieces of infrastructure, such as bridge decks, due to its enhanced durability and engineering properties. However, HPC is highly susceptible to early-age cracking. Cracking within the first months of a bridge deck’s lifespan can severely hinder its long-term performance and durability....
We assessed use and selection of cover by coastal cutthroat trout (Oncorhynchus clarkii
clarkii) in six headwater streams in three watersheds in western Oregon, USA during the summer low flow period from 1 August and September 30, 2007. We tagged 1037 coastal cutthroat trout (>100 mm) with passive integrated transponder...
Alternative male phenotypes in salmonine fishes arise from individuals that mature as either larger and older anadromous marine-migrants or as smaller and younger freshwater residents. Variability in age and size of males at maturity is hypothesized to be preceded by early differences in growth in size and lipid storage. Water...
The effects of varying flow rate ratio and Reynolds number on the momentum diffusion and flow development of two co-flowing, laminar streams in a rectangular microchannel are presented. The microchannel has an aspect ratio of approximately 16 with a width of 1006 μm and a height of 63 μm. A...
There is renewed interest in North America for the use of calcium aluminate cement (CAC) in infrastructure repair. The interest is driven by the specialty properties that make CAC the ideal candidate for particular applications. These include rapid strength gain, even at temperatures approaching 0°C, the ability to customize fresh...
In the past ten years, renewed research interest has shown the benefits of internal curing by incorporating saturated lightweight fine aggregate (LWFA) in high performance concrete (HPC). As a result, the technology of internal curing has steadily progressed from laboratory studies to field applications. To determine the optimum LWFA content,...
Large wood has been utilized in many restoration projects to improve in-stream habitat in the Pacific Northwest for salmon. However, the benefits of this practice remain the subject of ongoing debate and evaluation of these projects has scarcely been done for non-salmonid species such as lamprey. In this study we...
:
________________________________________________________________________
Jason B. Dunham
Large wood has been utilized in many restoration projects to improve in
The economic analysis of land use decisions provides insight into incentive structures faced by landowners and the impacts of landowner decisions on others. Qualifying and quantifying these incentives and impacts offers insight into the relevant characteristics of decision-making. In turn, this allows the researcher to model and predict land use...
Deep mixing events in the ocean’s surface layer act as physical drivers of carbon export by detraining dissolved and particulate organic matter, including surface phytoplankton communities, to depth. Once removed from the sunlit surface ocean environment, phytoplankton accumulation rates are dependent on the relative contributions of loss processes, such as...
Ecological resources available to freshwater fish shift spatially, temporally and across life stages. To better understand how spatial-temporal availability of resources influence fish, I examined the phenologies of hatching and emergence of Coho Salmon (Oncorhynchus kisutch) in streams with contrasting and strongly defined seasonal thermal variability. The study streams included...
PURPOSE: We tested the hypothesis that the unsupervised, isokinetic 3- minute all-out cycling test (3MT) would be a valid and reliable way to determine end power (EP) and work done above end power (WEP). Additionally, we hypothesized that EP would successfully demarcate between heavy and severe-intensity exercise and thus represent...
Objectively quantifying workload is challenging due to a variety of factors. One way to measure workload is by training impulse (TRIMP). TRIMP uses time in physiologically significant heart rate zones to quantify a workload for a given bout of physical activity. Tracking average workload over time can then be used...
Internal curing is a term used to describe a process in which curing water is provided to a concrete mixture from inside the mixture. Internal curing water has typically been provided in North America mixtures by using prewetted porous materials, like fine lightweight aggregate (FLWA). Alternative materials, such as superabsorbent...
Studies of the effects of forest harvest on streams and fish have a long history in the Pacific Northwest. Results of this work have prompted development of new forest harvest practices that are more protective of these resources, but the effectiveness of these new practices has not been fully evaluated....
:
_____________________________________________________________________
Jason B. Dunham
Studies of the effects of forest harvest on streams and fish have a long
In this study, we used a combination of conventional statistical analyses and mechanistic bioenergetics models to understand the potential effects of environmental variability on growth of stream-living fishes in four headwater streams subject to upstream forest harvest. We focused on two common fish consumers in headwater streams in the Pacific...
Previous research has shown that using fine lightweight aggregate (FLWA) can be a promising strategy to mitigate alkali-silica reaction (ASR) in mortar and concrete. While several possible theories were proposed by researchers, discrepancies in testing methods, materials, and supporting evidence still exist. Therefore, this study was initiated. There are two...
The Critical Power - W’ model has many advantages compared to the traditional VO2max test, including tracking fitness changes over time in well trained athletes, predicting performances due to its discrete aerobic and high intensity tolerance variables, and prescribing exercise intensities with increased accuracy. However, a major disadvantage of this...
Coastal cutthroat trout (Oncorhynchus clarkii clarkii) and cottids (Cottus spp) commonly co-occur in headwater streams in western Oregon. Little is known about the comparative trophic ecology of these species or how they respond to seasonal scarcity of resources. In this study I evaluated the seasonal variability in diets and consumption...
The use of fly ash as a supplementary cementitious material (SCM) has increased in the last century due to its various environmental benefits as a recycled product. Within the last 60 years, it has been found that it can be used to effectively control damage induced by Alkali-Silica Reaction. However,...
High early strength (HES) concrete is becoming increasingly used to repair damaged concrete pavement sections. The use of HES concrete enables the repaired pavement to be opened to traffic within hours of placing the concrete. A common approach used for the rapid repair of concrete pavement consists of closing a...
Mean-squared errors of surface geostrophic velocity estimates from the crossover and parallel-track methods are calculated for altimeters in the Ocean Topography Experiment (TOPEX)/Poseidon and Jason orbits. As part of the crossover method analysis, the filtering properties and errors of cross-track speed estimates are examined. Velocity estimates from both the crossover...
CTD observations of temperature and salinity were made
off the coast of Peru between 12°S and 16°S from the
R/V EASTWARD, between 23 July and 16 August 1976. The
observations were made during Legs 0, 1, and 2 of JASON,
which was the middle phase of the JOINT-II project conducted...
Maximal aerobic capacity (V̇O₂max) is the most widely used measure for assessing cardiorespiratory fitness. It is a strong contributor to performance in endurance sports, predicts functional capacity in older adults, and is related to overall disease risk. As such, it is important that testing methodologies for determining V̇O₂max provide valid...
Shallow lakes exist in either a clear or turbid state, with the clear state characterized by an abundance of aquatic macrophytes, diverse aquatic biota, low water column nutrients and phytoplankton biomass, whereas the turbid state is characterized by the opposite. These two distinct states are maintained by reinforcing (positive) feedback...
Subduction zone earthquake and tsunami hazards affect tens of millions worldwide and the recurrence of these disasters can be evaluated with paleoseismic techniques, because earthquake cycles (and their supercycles) typically span many millennia. In these three chapters, I discuss a suite of analyses I use to evaluate the sedimentary record...
Several reports related to dams and dam removal have been released this decade by non-governmental organizations including Dam Removal: Science and Decision Making by The Heinz Center which focused on small dams, since most of the dams removed to date as well as those likely to be removed in the...
The implementation of particular management practices to control the use of natural resources can unintentionally create barriers to trade in resources and resource access. Foreign firms have developed a variety of methods to bypass trade barriers. This thesis examines the use of foreign direct investment as a means of bypassing...
Field tests are often the most practical method to assess aerobic fitness, but
demonstrate greater error variability than laboratory tests. Researchers can improve
field tests by identifying factors that contribute to systematic error in VO₂max
estimation. PURPOSE: To examine the validity and reliability evidence of two field
tests of aerobic...
At Oregon State University the Multi-Application Small Light Water Reactor (MASLWR) integral effects testing facility is being prepared for safety analysis matrix testing in support of the NuScale Power Inc. (NSP) design certification progress. The facility will be used to simulate design basis accident performance of the reactor's safety systems....
Low concentrations of dissolved copper have proven to be harmful to a number of aquatic organisms, with recent research highlighting detrimental effects to endangered salmonid species. Stormwater runoff can represent a significant source of copper to surface waters, necessitating cost-effective alternatives to current stormwater best management practices (BMPs). This study...
Wave-induced circulation is the defining characteristic of the nearshore. Within this region, the constant feedback cycle between incoming waves, wave-generated currents, and the mobile sediment bed is responsible for the evolution of complex patterns in nearshore and beach morphology. Central to our understanding of this system is knowledge of the...
2020 and 2021 brought the first reported outbreaks of salmonellosis epidemiologically linked to dry bulb onions in the United States. Outbreak investigations were not able to implicate a specific source of the contamination but speculated that contaminated water was a significant contributor. The Produce Safety Rule established minimum standards for...
Nest counts from the largest subpopulation of the loggerhead sea turtle (Caretta caretta) in the Atlantic, peninsular Florida, have been declining since 1998. Analyzing trends of nests and adult females is insufficient to determine the overall status of a sea turtle population, due to variation in nesting frequency and a...
Reporter gene transactivation by human p53 is inhibited in budding yeast lacking the TRR1 gene encoding thioredoxin reductase. Thioredoxin reductase specifically catalyzes the NADPH-dependent reduction of thioredoxin. Thioredoxin provides a source of electrons for disulfide reduction in various cellular processes. Reduction of disulfides within the cell can be accomplished by...
The most common test methods to evaluate alkali-silica reaction (ASR), the concrete prism test (CPT) and the accelerated mortar bar tests (AMBT), have limitations and are not entirely reliable in terms of predicting the performance of concrete with prevention measures under field conditions. In this study, the miniature concrete prism...
Education as a right has taken off internationally with expanded national policies in recent years. Across Africa over 80% of countries have abolished tuition fees for primary education and several have made the leap to free secondary education as well. With decreased financial barriers keeping kids out of the classroom,...
Chloride-induced corrosion is one of the primary causes of the degradation of reinforced steel in concrete structures. Currently, the rapid chloride permeability test (RCPT) is the most specified method to determine the concrete’s resistivity to chloride ingress, thus a determining factor in assessing the durability of concrete. While it is...
High early strength concrete (HESC) allows for faster construction with less impact on traffic, thus reducing the indirect costs associated with a project. There are multiple methods for achieving early strength, such as alternative cements like calcium sulfoaluminate (CSA) or chemically accelerated portland cements. The standard criteria for an HESC...
During applied signal-detection (e.g., airport-baggage screening) human operators can be assisted in their decision-making process by automated devices. Automation implementation is aimed at increasing performance relative to unaided levels. Generally, this intended effect is empirically observed. However, operators consistently fall short of optimal levels of aided performance, indicating suboptimal aid-use...
Using recycled concrete aggregate (RCA) as a replacement for natural aggregate in new concrete is a promising way to increase the overall sustainability of new concrete. This has been hindered, however, by a general perception that RCA is a sub-standard material due to the lack of technical guidance, specifically related...
) ............................................................. 166
Figure A-9: Expansions as a function of time for various replacement levels for Ca-R and
Ca-V
Automated decision aids can improve human decision-making but the benefits are often compromised by inefficient use. The current experiment examined whether metacognition—the ability to assess self-performance—and numeracy—the ability to understand and work with numbers—predict the efficiency of automation use in a signal detection task. Two-hundred twenty-one participants classified random dot...
When observers monitor for infrequent signals for extended durations, they generally experience a decline in detections over time. This decline is termed the vigilance decrement. Current theories of vigilance attribute the decrement to three potential mechanisms: conservative shifts in response bias, losses of sensitivity, and an increased rate of attentional...
The purpose of this study was to examine the validity and reliability of the 30-minute cycling time trial to estimate the heart rate at lactate threshold. Recreationally trained cyclists and triathletes (n = 47) performed 3 tests in random order: 1) One graded exercise test to directly determine lactate threshold...
:
_________________________________________________________________________________________________________
Jason
T.
Penry
The
purpose
of
this
study
was
to
examine
The goal of the first part of this project was to investigate the influence of aggregate source and entrained air on the transport properties of concrete. Currently, there are several ASTM standards available that provide systematic procedures to evaluate mass transport properties of concrete. ASTM C642-13 (ASTM 2013), often referred...
Streams across the western United States are impaired from human alterations that have reduced freshwater habitat by simplifying channel complexity and disconnecting floodplains (Knox et al., 2022; Waples et al., 2008; Wohl, 2014). Climate change is likely to continue exacerbating these risks by warming summer surface stream temperatures (Crozier et...
Riparian forests provide a myriad of ecosystem functions for adjacent streams and rivers, and due to these linkages, changes in riparian forest conditions can have direct implications for stream ecosystems. Resource managers in the coast redwood forests (Sequoia sempervirens) of northern California (USA) are actively thinning second-growth stands to accelerate...
In the Pacific Northwest ecoregion of North America, sculpins represent a major constituent of freshwater assemblages in coastal rivers. Based on their prevalence and abundance, sculpins are likely important ecologically, yet little is known of their interactions with co-occurring species, such as widely studied salmon and trout (salmonines). In this...
Due to its availability, versatility, structural capability, and economic advantages, concrete is the most widely used material in building sewer networks and other wastewater structures such as treatment stations, wastewater digesters, septic tanks, pumping stations, hydraulic risers, utility risers and covers, etc. Concrete structures exposed to sewer environments can experience...
When decision makers work collaboratively, their combined performance can exceed the performance of even the best group member working alone. However, despite the potential for performance gains when working in a group, collaborating individuals often show poor coordination and losses of motivation, and are generally inefficient at combining their resources...
Interest in performance specifications has been growing in the civil and construction industry in the past decade. One major focus area has been on understanding how to prolong the service life of concrete structures, since repair and rehabilitation of existing infrastructure have cost many trillions of dollars. Deterioration mechanisms such...
Automated systems have become increasingly important to human decision making and task performance in a wide variety of complex fields and situations. Decision aids, a specific form of automation, assist human operators in making complex decisions under conditions of uncertainty, such as air traffic control or combat identification. When humans...
The fitness of female Pacific salmon (Oncorhynchus spp.) with respect to breeding behavior can be partitioned into at least four components: survival to reproduction, competition for breeding sites, success of egg incubation, and suitability of the local environment near breeding sites for early rearing of juveniles. Accordingly, breeding sites should...
High performance concrete (HPC) provides a long lasting, durable concrete that is typically used in bridge decks due to its low permeability, high abrasion resistance, freeze-thaw resistance and strength. However, this type of concrete is highly susceptible to the deleterious effects of both autogenous and drying shrinkage. Both types of...
An experimental study of the near-field flow structure produced by an incompressible turbulent Acoustically Self-Excited Jet (ASEJ) in a large enclosure using Particle Image Velocimetry (PIV) is presented. The salient feature of this jet is that it provides an increase in near-field mixing and turbulence without additional external power input....
The constitutive behavior of high-performance fiber-reinforced cementitious composites (HPFRCCs) under mechanical loading is characterized by significant tensile properties that play an essential role in the structural response of several applications in structural engineering. The significance of tensile properties of HPFRCCs in structural engineering is the focus of three manuscripts presented...
Mountainous headwater streams make up ~80 % of stream length globally and are strongly connected with catchment hillslopes and riparian areas, which can influence water quantity, quality, and availability for downstream uses. Accordingly, effective management of headwater streams and riparian zones to maintain desired ecosystem services downstream is critical, particularly...
Forested headwater streams are critical for the supply of water, sediment, nutrients, and organic matter to downstream water bodies. Nearly half of all headwater streams display temporary flow regimes (i.e., non-perennial), but with climate change they may become more common. Thus, it will be increasingly imperative to adequately represent non-perennial...
Subduction zone earthquake and tsunami hazards affect tens of millions worldwide and the recurrence of these disasters can be evaluated with paleoseismic techniques, because earthquake cycles (and their supercycles) typically span many millennia. In these three chapters, I discuss a suite of analyses I use to evaluate the sedimentary record...
Subduction zone earthquake and tsunami hazards affect tens of millions worldwide and the recurrence of these disasters can be evaluated with paleoseismic techniques, because earthquake cycles (and their supercycles) typically span many millennia. In these three chapters, I discuss a suite of analyses I use to evaluate the sedimentary record...
Full Text:
DISSERTATION OF
JasonR. Pa on for the degree of Doctor of Philosophy in Oceanography presented on
January 9
Qualitative and quantitative analysis of the top ten best-selling children's picture books of 2006 reveals that these books contain elements of systematic privilege and oppression. Dominant group members are numerically overrepresented in the sample. Major emergent themes are the normalization of racism and white privilege, the stereotypical portrayal of the...
Marine primary production can be modeled and estimated using remotely-observable physiological signatures such as chlorophyll and carbon. Current models are based on strict physiological relationships based on photoautotrophic phytoplankton, and discrepancies between modeled and in situ data may stem from unaccounted-for physiological deviations from photoautotrophy. Mixotrophic phytoplankton can obtain energy...
BiCuOSe and SnS are layered, moderate band gap (ε[subscript G] ≈ 1 eV) semiconductors that exhibit intrinsic p type conductivity. Doping of BiCuOSe with Ca results in a slight expansion of the lattice and an increase of the hole concentration from 10¹⁸ cm⁻³ to greater than 10²⁰ cm⁻³. The large...
Performing bridge inspections can be a very daunting task for every department of transportation (DOT) in the country. Because the leading cause of deterioration in reinforced concrete bridge decks is corrosion of the steel reinforcement, the ability to detect the concentration of corrosion-causing chlorides in the concrete, using a non-destructive...
Partial migration is a common migratory behavior where some individuals in a population migrate and others do not. Patterns of partial migration can vary dramatically, especially for species that inhabit a wide range of environments. I described and predicted spatial variation in marine migration (anadromy) of female Oncorhynchus mykiss (steelhead...
:
_____________________________________________________________________
Jason B. Dunham
Partial migration is a common migratory behavior where some individuals
This thesis will cover my work relating to the developing field of terahertz (THz) science and technology. It will present experimental and theoretical studies investigating the optical and electrical properties of various material systems using novel THz imaging and spectroscopy techniques. Due to its low photon energy, THz imaging and...
Heavy metals, such as copper, zinc, and cadmium, are ubiquitous in stormwater and potentially toxic to aquatic organisms at low concentrations. Removal of heavy metals contamination by conventional treatment is expensive and does not always reduce metals concentrations low enough to ensure safety of all aquatic species. This research seeks...
The steel diagrid structural system is a recent load bearing and lateral resisting structural system for tall building structures that is relatively unexplored in the western United States. One possible reason for the little use of diagrid systems in earthquake prone regions is the lack of guidelines and application examples...
In this report we will present vertical sections of temperature, salinity and sigma-t from both CTD and bottle casts made on legs 1-5 of the R/V Eastward during JASON, and from CTD casts made on legs 1, 2 and 4 of the R/V Melville and legs .2 and 4 of...
The composition of global agricultural trade is shifting from primary commodities to processed foods in terms of value and quantity. It is important to understand the linkages between agriculture and food processing to identify the sources of the structural change in agricultural trade. The question addressed by this research is...
Microbial ecology has been transformed by metagenomics, the study of the genetic in-formation in entire communities of organisms. In the following we develop metagenomic tools arising from the classic Wasserstein metric as applied to questions regarding the diversity between microbial communities. We provide a novel proof of the characteriza-tion of...
Extending the flight time of an autonomous unmanned air vehicle by soaring is
considered. A suboptimal controller is developed and successful static soaring is
demonstrated with a 6 degree of freedom glider model. Altitude gain rates of between
¼ and ½ m/s are achieved with this simple implementation.
A hybrid...
This study investigated long-term (1961-2008) changes in albacore (Thunnus alalunga) abundance and distribution in relation to local environmental and large-scale climate indices in the Northeastern Pacific using time series and spatial analyses. Prior to the time series analysis, a wavelet analysis was conducted to examine nonrandom patterns of cyclical variability...
The Polycomb group (PcG) of genes of Drosophila melanogaster Meigen are involved in developmental regulation through chromatin remodeling. Homologs of PcG genes have been identified in both plant and animal species. In this study, we detail the identification and characterization of Triticum enhancer of zeste 1 (Tez1), a homolog of...
Halogenated monoterpene production by the red macroalga Octhodes secundiramea was studied-under different levels of nutrient, bromide, vanadium and light delivery. The key products formed were identified as myrcene, betaelemene, the Z and E isomers of l0-bromomyrcene, 3-chloro-10E-bromomyrcene, Apakaocthodene A, and isomers of chloromyrcene and dibromomyrcene. The proposed pathway begins with...
Mixed anion compounds that form ZrCuSiAs-type crystal structures exhibit remarkable properties such as superconductivity at low temperatures,
hole conduction with optical transparency in the visible region, and exciton absorption at room temperature. In this thesis, properties of a selected group of materials out of the very large set of mixed...
We identify all translation covers among triangular billiards surfaces. Our main tools are the J-invariant of Kenyon and Smillie and a property of triangular billiards surfaces, which we call fingerprint type, that is invariant under balanced translation covers.
Burial Lake sediments from the Noatak Basin in the northwest Brooks Range of Arctic Alaska (68.43°N, 159.17°W, 21.5 m water depth) provide the oldest continuous lacustrine record of paleo-environmental change and paleomagnetic secular variation (PSV) in eastern Beringia. A precise radiocarbon chronology, determined through accelerator mass spectrometry (AMS) allows us...
Plate boundaries are commonly regions of complex, diffuse deformation with
the motion across the boundary accommodated by numerous structural systems, rather
than being narrow, discrete zones of deformation. One such boundary occurs where
the North American plate makes contact with Juan de Fuca, Gorda, and Pacific plates
along the west...
Ensuring correctness of real-world software applications is a challenging task. Testing can be used to find many bugs, but is typically not sufficient for proving correctness or even eliminating entire classes of bugs. However, formal proof and verification techniques tend to be very heavy weight and are simply not available...
This thesis develops a manual for interpreters at six National Park Service areas established to preserve and interpret fossils of the Cenozoic Era: Fossil Butte National Monument (Wyoming), John Day Fossil Beds National Monument (Oregon), Badlands National Park (South Dakota), Florissant Fossil Beds National Monument (Colorado), Agate Fossil Beds National...
The LA Book is a free-to-students Linear Algebra textbook written at the introductory
level and suitable for teaching MTH341 at Oregon State University. It functions both as
a traditional, printed book (rendered via LaTeX) and as an online textbook (rendered via
HTML), viewable via any modern web-browser. It is built...
The internet-of-things is a growing market segment which is based on an arrayof portable communication devices with high power efficiency. Advanced semiconductortechnology can easily improve their digital performance, but the samecannot be said for the analog blocks which are vital to their operation. Highperformance analog circuits continue to use conventional...
According to most health organizations, "obesity" (defined as body mass index [BMI] greater than 30) is a world health problem of "epidemic" proportions. The underlying assumption is that weight is a proxy for health. However, obesity prevention and reduction interventions are designed to regulate body weight, rather than improve health....
A pilot scale demonstration of a biological permeable barrier was conducted in a pentachlorophenol-contaminated aquifer at a wood preserving facility. A permeable reactor was constructed to fit within a
large diameter well. Arranged in series, a cylindrical reactor 24" x 36" (0.61 x 0.91m) (diameter x height)
was partitioned to...
The objective of this study was to evaluate the effect of commodity promotion activities on the United States' hazelnut farmer's economic welfare. Commodity promotion activities, such as generic advertising and research, are the responsibilities of government mandated commodity commissions, such as the Hazelnut Marketing Board (HMB). The HMB is a...
This thesis provides a comparison of advanced econometric frameworks to account for unobserved factors in crash reported data (also referred to as unobserved heterogeneity) while identifying contributing factors by roadway classification for heavy vehicle injury severity and crash rates. The presented thesis provides two manuscripts that expand the literature regarding...
This dissertation demonstrated that the electrical properties of complex oxide-based perovskite materials could be controlled through the careful modification of both material composition and structure. This was first shown through the modification of lead zirconate titanate (Pb(Zr0.52Ti0.48)O3, PZT) solid solutions with bismuth indate (BiInO3, BI) where the relative stability of...