Background: Functional annotations of large plant genome projects mostly provide information on gene function
and gene families based on the presence of protein domains and gene homology, but not necessarily in
association with gene expression or metabolic and regulatory networks. These additional annotations are necessary
to understand the physiology, development...
A framework for understanding the synthesis and catalysis of metabolites and other biochemicals by proteins is crucial for unraveling the physiology of cells. To create such a framework for Zea mays L. subsp. mays (maize), we developed MaizeCyc, a metabolic network of enzyme catalysts, proteins, carbohydrates, lipids, amino acids, secondary...
Now in its 10th year, the Gramene database (http://www.gramene.org) has grown from its primary focus on rice, the first fully-sequenced grass genome, to become a resource for major model and crop plants including Arabidopsis, Brachypodium, maize, sorghum, poplar and grape in addition to several species of rice. Gramene began with...
Gramene (www.gramene.org) is a curated resource
for genetic, genomic and comparative genomics
data for the major crop species, including rice,
maize, wheat and many other plant (mainly grass)
species. Gramene is an open-source project.
All data and software are freely downloadable
through the ftp site (ftp.gramene.org/pub/gramene)
and available for use...
Many Gram-negative bacteria use a type III secretion system (T3SS) to establish associations with their hosts. The T3SS is a conduit for direct injection of type-III effector proteins into host cells, where they manipulate the host for the benefit of the infecting bacterium. For plant-associated pathogens, the variations in number...
Naked (hull-less) barley has historically been grown for food, but interest in, and breeding efforts for, its use in malting and brewing have increased due to the potential benefits: reduced off-flavors, reduced spent grain, and higher malt extract. These benefits are offset by limiting factors such as high b-glucan and...
Space flight results in loss of mass and function in skeletal
muscle. Data from manned flights and animal biosatellites give
evidence of possible changes in neuromuscular interactions.
Components at the neuromuscular junction are a potential site of
action for this space-induced muscle atrophy. We examined the
nicotinic acetylcholine receptor population...
Although endothermy is one of the most significant evolutionary developments in the vertebrates, its origins among extinct taxa have traditionally been difficult to determine. Endothermy is primarily an attribute of the "soft anatomy," and its key features, such as complex lungs, elevated blood oxygen carrying capacity and mitochondrial density, do...
Barth's theory of transactional analysis is applied to the
community of Tiller, Oregon and its reaction to a development proposal.
Community behavior patterns vis-a-vis the development proposal are
examined from a processual point of view to determine how these
patterns are generated.
The community's history and contemporary situation are described....
This index provides access to infonnation about women in 102 books and journals. The information contained in each entry is only as good as the original and the quality varies considerably. Much of this infonnation has not before been easily accesible in this form. My hope is that this index...
Rising atmospheric [CO₂], cₐ, is expected to affect stomatal regulation of leaf gas-exchange of woody plants, thus influencing energy fluxes as well as carbon (C), water, and nutrient cycling of forests. Researchers have proposed various strategies for stomatal regulation of leaf gas-exchange that include maintaining a constant leaf internal [CO₂],...
Silver interlayers between maraging steel base metal were examined to evaluate mechanisms leading to ductile failure in constrained thin metals. The constraint of the maraging steel base metal during uniaxial testing of constrained thin silver results in a large hydrostatic tension component, a small von Mises effective stress, and negligible...
Published June 2007. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Scleractinian corals, like many other cnidarians, engage in intracellular symbiosis with
dinoflagellates belonging to the genus Symbiodinium. This association makes
invaluable structural and energetic contributions to the marine environment and to the
coral reef ecosystem in particular. While many aspects of the cnidarian-dinoflagellate
relationship have been well studied, nothing is...
This compilation of theses and dissertations (a part of the OSU Bibliographic Series) for the period 1970-1977 reflects this university's emphasis on research and graduate study. It may be viewed as an indicator of the contributions made to the state of Oregon through graduate study and research at Oregon State...
Published January 1936. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Published January 1947. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
To determine if 6 weeks prior supplementation with vitamins E and C
could alleviate exercise-induced DNA damage, prevent lipid peroxidation and
inflammation, slow the rate of vitamin E utilization and/or attenuate muscle
damage, 22 subjects (11 females: 11 males) were studied during a 50 km (32
mile) ultramarathon. Subjects were...
Symbioses between microbes and multicellular eukaryotes are found in all biomes, and encompass a spectrum of symbiotic lifestyles that includes parasitism and disease, commensalism, and mutually beneficial interdependent host-microbe relationships. Regardless of outcome, these symbiotic lifestyles are governed by a complex molecular "courtship" between microbe and potential host. This courtship...
Proper nitrogen (N) management and variety selection are important for profitable hard red winter (HRW) wheat production in the dryland growing regions of northeastern Oregon. In these dryland systems, N management for grain yield and grain protein concentration (GPC) is challenging due to climatic and year-to-year variation in production environments....
Cnidarians and their symbiotic dinoflagellates form a productive mutualism that shapes marine environments. In this symbiosis, dinoflagellate species from the family Symbiodiniacea reside within cnidarian host gastrodermal cells and provide the host with photosynthetically fixed carbon in exchange for host metabolites. This nutritional exchange allows both partners to thrive in...
This dissertation focuses on science relevant to the design and implementation of marine reserves. The chapters explore a range of topics related to among-site variation in population, community, and ecosystem dynamics. My results demonstrate the value and feasibility of integrating this knowledge into more comprehensive conservation and management approaches. While...
Symbiosis is the close and protracted interaction between organisms. The molecular interactions that occur during symbiosis are complex with multiple barriers that must be overcome. Many Gram-negative, host-associated bacteria use a type III secretion system to mediate associations with their eukaryotic hosts. This secretion system is a specialized apparatus for...
The settlement history of a remote area in the Coast Range of Oregon, from the 1870s to the 1930s, is examined through factors that may have influenced the success or failure, and length of residence of the homesteaders and later residents. Despite the rugged and isolated location, a small community...
The settlement history of a remote area in the Coast Range of Oregon, from the 1870s to the 1930s, is examined through factors that may have influenced the success or failure, and length of residence of the homesteaders and later residents. Despite the rugged and isolated location, a small community...
The majority of teachers in the state of Oregon are White, prompting the state’s legislative bodies to explore and create ways to increase racial diversity in the profession. Contextually, both state level mandates and national accreditation bodies have attempted to address the lack of diversity amongst teachers in the K-12...
With continual and worldwide human population growth, our impact on the natural environment expands and intensifies every day. We consume natural resources, burn fossil fuels, and release toxic compounds into the air, water, and earth. We build roads that fragment the landscape, construct new settlements, and develop agricultural lands in...
Published January 1993. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Oregon Biography Index is intended to serve primarily as a starting point in locating biographies of Oregonians. We have indexed 47 historical volumes which are either entirely devoted to biographies or have large self-contained biographical sections. The profiles in the books vary widely in accuracy and detail. Birth dates of...