Le futur du secteur de la pèche en Andalousie doit être analyse dans le contexte d'une stratégie de développement régional liée a une économie de plus en plus mondialisée. L'union européenne, d'où l’Andalousie fait partie, veut-elle être productrice de poisson, ou bien, exclusivement une commerçante des produits pécheurs? la question...
Le future du secteur de la pêche en Andalousie doit être analysé dans le contexte d'une stratégie de développement régional liée a une économie de plus en plus mondialisée.
l'union européenne, d'où l'Andalousie en fait partie, veut-elle être productrice de poisson, ou bien, exclusivement une commerçante des produits pêcheurs? la...
Strong self-regulation skills can predict academic success in early childhood contexts, specifically for math and literacy skills, thus laying the foundation for future success (McClelland & Cameron, 2012; McClelland & Ponitz, 2011). Children’s exposure to increased instructional time in school through programs such as full day kindergarten (FDK) has also...
Objective: To describe associations between self-reported general health status, chronic conditions, and use of supplements containing botanicals (SCB) and describe reasons for use among U.S. adult supplement users.
Design: Cross-sectional analysis using data from the 2009-2014 National Health and Nutrition Examination Survey (NHANES). Information on self-reported dietary supplement use and...
Effects of stochastic variations of parameters in the planning
and design of a particleboard production system are studied. The
solution obtained from a linear deterministic optimization model is
compared against both the solution derived from the traditional
stochastic programming techniques and the distribution of optimal
objective function values obtained from...
Daikon, mizuna, mizspoona, and komatsuna are novel Asian vegetables for which a market exists in Oregon, especially in the organic sector. However, these crops are currently not grown widely in the area, despite the favorable growing environment of Oregon’s Willamette Valley. Little is known about the appropriate application level of...
Cystic ovarian disease (COD) is an anovulatory condition in cattle
that afflicts between 6-18% of all dairy cows in the US. Ovulation is
dependent on the plasminogen activator (PA) family of proteases
and protease inhibitor for proteolysis, culminating in follicular rupture.
Failure of the follicle to ovulate suggests an aberration...
Shelf-life is the time period during which products retain market-acceptable quality while meeting legal and safety requirements. Deterministic models yield single value estimations of shelf-life typically based on average or worst-case values for input parameters. In deterministic calculations, considering the input parameter variability can be challenging. In this study, a...
Many volatile compounds generated during the thermal processing of milk have been associated with cooked, stale, and sulfurous notes in milk and are considered as off-flavor by most consumers. A headspace solid-phase microextraction (HS-SPME)/gas chromatographic technique for the quantitative analysis of thermally derived off-flavor compounds was developed in this study....
A moderate high-pressure processing (HPP) treatment is proposed to accelerate the shredability of Cheddar cheese. High pressure processing (345 and 483 MPa for 3 and 7 min) applied to unripened (1 d old) stirredcurd Cheddar cheese yielded microstructure changes that differed with pressure level and processing time. Untreated and pressure-treated...
We investigated intra-specific variation in the response of salmon to infection with the
myxozoan Ceratomyxa shasta by comparing the progress of parasite infection and measures of
host immune response in susceptible and resistant Chinook salmon Oncorhynchus tshawytscha at
days 12, 25 and 90 post exposure. There were no differences in...
Milk fever (MF), retained placenta (RP), and left displaced abomasum (LDA) are three common and costly metabolic diseases in cows during the first days of lactation. Some studies suggest that circulating concentrations of α-tocopherol (ATOC) are decreased by these three diseases. It is, however, unknown if and how long lower...
Rates of electronic cigarettes (or “e-cigarettes”) use among youth are so high that the Surgeon General declared them to be of “epidemic proportions” (A Report of the Surgeon General, 2012). If these rates go unchanged, e-cigarettes will likely be responsible for the creation of a new generation of combustible cigarette...
On social media platforms and on blog sites, disordered behavior as a lifestyle choice is a growing trend that supports and promotes behaviors related to self-harm and anorexia. Web content advocating self-harm and anorexia can be found easily through search engines or can be concealed in the social media sphere...
As obligate intracellular parasites, viruses rely on host machinery for their own reproduction. Viruses are therefore required to interact with a wide variety of host proteins, despite limitations in viral genome size. The most parsimonious method of success is to hijack central and essential proteins, known as hub proteins. LC8...
To improve storage/shipping quality of sweet cherry (Prunus avium L.), the effect of calcium chloride (CaCl₂) added to hydro-cooling water on physiological and biochemical processes related to fruit and pedicel quality was investigated on two major cultivars. The fruit tissue Ca content increased up to 29% to 85% logarithmically for...
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. E. (2014). The effect of postharvest calcium
application in hydro-cooling water on tissue calcium
Mycobacterium avium subspecies paratuberculosis (MAP) is the causative agent of Johne's disease, a chronic inflammatory bowel disease that affects ruminant populations worldwide. The characteristic stages of the disease make diagnosis difficult, resulting in silent transmission among animals in a herd for years before proper detection of the infection. The extensive...
Several systems were examined for the production and delivery of recombinant vaccines for fish. C. crescentus was employed to produce a fragment of the IHNV glycoprotein. When administered by injection to 0.5 gram rainbow trout (Oncorhynchus mykiss), one of the fusion proteins (184 amino acids of the IHNV glycoprotein fused...
Among the suite of water resources management strategies, water banking can be a tool for water resource management in areas with high water demands or localized water scarcity. This research aims to further the understanding of water banking by conducting a review and analysis of relevant state legislation. This research...
During summer and fall 2007, I traveled across Europe and studied in Spain. My experiences abroad shaped my reading of certain literary texts as I gained insight into the cultures and settings in which they were produced. In my thesis, I recount some of these experiences and show how my...
This thesis presents a channelized digital receiver design for UWB sytems in a multipath indoor environment. The UWB technology has been used for commercial and military purposes due to a number of advantages such as low-power consumption, noise-like and carrier free. The energy of UWB signal is spread over a...
Environmental stress can negatively affect the ability of organisms to reproduce. Energetic trade-offs exist in all organisms, and under stress, energy may be allocated away from reproduction and towards physiological defense and repair mechanisms. The rocky intertidal environment is ideal for investigating the influence of environmental stress, as organisms are...
Emerging infectious diseases in wild animals threaten global biodiversity as well as domestic animal and human health. Their unprecedented increase in conjunction with anthropogenically induced range shifts of endemic pathogens exposes hosts to novel parasite combinations, lending urgency to research on disease dynamics in wildlife systems. In natural populations, hosts...
The growth of Brettanomyces bruxellensis is a major cause of wine spoilage due tothe production of the volatile phenols 4-ethylphenol (4-EP) and 4-ethylguaiacol (4-EG), derivatives of p-coumaric acid and ferulic acid. During the winemaking process,some microorganisms can impact the concentration of the 4-EP precursors pcoumaricand coutaric acid (tartaric acid-esterified p-coumaric...
This thesis follows two studies performed with simple robots. The first follows a robot interacting with eight improvisers to create scenes and perform five isolated gestures (towards, away, sideways, spin, and circle) for interpretation. The second follows a group of three robots performing the same five isolated gestures at two...
The myxozoan Ceratonova shasta is an intestinal parasite of salmon and trout that causes ceratomyxosis, a disease characterized by severe inflammation of the intestine that can lead to hemorrhaging, necrosis, and death of the fish host. The parasite is endemic to the Pacific Northwest of the United States and Canada,...
Plants develop a vast array of cell shapes and sizes by selectively modifying their surrounding cell walls to expand in some regions and not in others. This process of morphogenesis requires the delivery of secretory vesicles to specific locations at the cell periphery, where exocytosis adds new membrane and proteins...
Continental shelf sediments are sinks for dissolved oxygen and sources of many major and minor nutrients required for oceanic surface primary production, resulting in a strong coupling between benthic and pelagic biogeochemical cycling. However, the influence and spatiotemporal variability of benthic remineralization on bottom-water chemistry and the supply of nutrients...
Gender has been the subject of study in engineering education and science social research for decades. However, little attention has been given to transgender and gender nonconforming (TGNC) experiences or perspectives. The role of cisgender or gender conforming status has not been investigated nor considered in prevailing frameworks of gender...
There is increasing awareness that human activities are altering the ways that natural systems operate and that local shifts in species composition and abundance can lead to abrupt and irreversible global change. Therefore, understanding the processes that buffer biological communities from critical shifts and how our actions affect natural stabilizing...
Children's early self-regulation skills have long-term implications for a variety of academic, social, and health outcomes. Unfortunately, children facing multiple family risk factors (e.g., harsh parenting, economic disadvantage) are more likely to struggle with early self-regulation. Despite early disparities in self-regulation, promising intervention evidence suggests that high quality prekindergarten experiences...
The functioning of marine habitats needs to be understood in the context of the ecological relationships and associations between organisms and the physical and biogenic environment they inhabit. Thus, it becomes important to explore and define habitat features which contribute to these relationships and which are important in the life...
Transition metal oxides are an important class of materials for the wide variety optical, electrical, dielectric, magnetic, and thermal properties observed. Their unique structure-property relationships allow for property tuning and often provide insight into the fundamentals of chemistry. The work in this thesis was focused on the design, synthesis and...
A social issue of great importance in contemporary society is the involvement of youth in gangs. Youth involvement in gang activity has dominated the national media and the minds of public policy makers in contemporary society. In this thesis I examine how Latino and Chicano youth sub-culture, language, dress, and...
This work explores the synthesis and characterization of the metastable alloys Sn1-xCaxCh (Ch= S, Se) and nitride compounds Zn-W-Mo-N, which have recently been predicted by theorists. Single phase thin films of Sn1-xCaxS are prepared by pulsed laser deposition and radio-frequency magnetron sputtering and of Sn1-xCaxSe are prepared by pulsed laser...
Numerous studies have explored how alluvial channel size and morphology are adjusted to different sediment and flow conditions, yet we still know very little about how and to what degree the flow regime controls channel form and processes. We use the term ‘channel form’ to refer to the size and...
Body size explains much of the interspecific variation in the physiology, behavior, and morphology of birds, such as metabolic rate, diet selection, intake rate, gut size, and bill size. Based on mass-specific metabolic requirements and relative energetic costs of activities, being a certain body size has both advantages and disadvantages....
With confirmation of non-nutritive sugar, erythritol, having insecticidal properties to Dipterans, this thesis research focuses on use of erythritol as a human-safe management tool for small berry and cherry pest, Drosophila suzukii, commonly referred to as spotted-wing drosophila. Drosophila suzukii is a destructive invasive fruit fly from Asia with an...
The budding yeast Brettanomyces bruxellensis has the potential to spoil fermented beverages and cause financial losses, but also contribute positively to certain products such as Lambic beer. It is most notorious for causing “Brett” spoilage of wine, which is characterized by undesirable aromas such as “bandaid” and “barnyard”, therefore most...
This research was conducted in the Mamora cork oak
forest of Morocco to: (1) Describe the impacts of sheep
grazing (none, 35% use, 70% use) in March, April, May and
June of 1987 and 1988 on seasonal forage production; (2)
evaluate the effects of these factors on annual changes
in...
Effective separation of lanthanides (Ln) from the minor actinides (MA) is a crucial technical challenge to closing the nuclear fuel cycle. This separation is a necessary prerequisite to transmute long-lived isotopes of Am and Cm, which will allow a reduction of the repository volume, thermal load, and radiological toxicity of...
Mycobacterium avium is a ubiquitous environmental organism found in water and soil. It can cause disease in patients with pre-existing pulmonary conditions, immunocompromised patients with the most prevalent being AIDS patients, as well as apparently healthy people. Studies have indicated that, upon macrophage uptake, Al. avium prevents phagosome-lysosome fusion, thus...
This study examined four occupational health risks that contribute to job strain, the experience of infectious disease, musculoskeletal strain, job dissatisfaction, and depressive symptoms, for toddler teachers as predictors of classroom quality. Both the physical and social settings of early care and education (ECE) are influential in shaping children’s early...
Mycobacterium avium subspecies hominissuis (MAH) is an opportunistic pathogen that is ubiquitous in the environment and often isolated from faucets and showerheads. MAH mostly infects humans with an underlying disease, such as chronic pulmonary disorder (COPD), cystic fibrosis (CF), or are immunocompromised, though infections in patients without concurrent disease are...
Transcriptomics and gene expression profiling enables the elucidation of the genetic response of an organism to various environmental cues. Transcriptomics enables the deciphering of differences between two closely related organisms to the same environment and in contrast, enables the elucidation of genetic responses of the same organism to different environmental...
Mycobacterium avium cause disseminated disease in immunocompromised people such as AIDS patients. Subsequent to crossing the intestinal epithelium, M. avium thrive within vacuoles in macrophages. The bacteria exhibit a different, more invasive, phenotype after being in macrophages compared to M. avium from laboratory conditions. We hypothesized that this intracellular phenotype...
Multiple drug resistance (MDR) Tuberculosis (TB), leads to increased use of “second-line” drugs; one of the most effective is ethionamide (ETA). ETA is a prodrug metabolized by a mycobacterial flavin-containing monooxygenase (EtaA) as well human flavin-containing monooxygenases (FMOs). Of the five functional FMOs of humans, FMOs 1, 2, and 3...
Hydrogels have been proposed as candidates for nucleus pulposus replacement due to
their similarity in mechanical behavior to the native tissue when subjected to transient or
static loading; however, given the viscoelastic nature of soft biological tissues, the lack of
dynamic testing is a significant inadequacy in the studies performed...
Several levels of eukaryotic chromatin structure have
been observed: the nucleosome, the 10 nm and 30 nm fibers
and loop domains, apparently attached to the nuclear
matrix. In this research, the structure and function of
chromatin at two of these levels was investigated, with
studies on both nucleosome positioning and...
Animals aggregate and interact in nonuniform and nonrandom patterns, which lead to group level characteristics that have important evolutionary and ecological consequences. Network analysis provides a useful conceptual framework for linking animal interactions at all scales from dyads to communities, to populations and ecosystems. Despite exciting theoretical and applied advances...
Rift Valley fever (RVF) is a mosquito-borne zoonotic viral disease native to the African continent. Outbreaks tend to occur in the wet seasons, and can affect numerous mammalian species including African buffalo. It is debated how the virus survives the inter-epidemic period when it is not detected in mammalian populations,...
Mycobacterium avium subsp. hominissuis (MAH) is a pervasive environmental bacterium that can cause opportunistic infections in humans. Among the most robust and hardy members of the Mycobacterium genus, M. avium can persist and thrive in a range of challenging environments, including many which place it in direct contact with humans....
Previous studies suggest that vitamin B-6 supplementation can alter fuel metabolism during
exercise and plasma amino acid levels at rest. To examine the effect of vitamin B-6
supplementation on plasma fuel substrates and amino acid levels during exercise, five trained
males (age: 29±7; V0₂ max: 54.7±6.2 ml/kg/min) performed two separate...
Two studies were conducted to determine the effect of varying vitamin B-6 (B- 6) status on lymphocyte mitogenic response and pyridoxal 5'-phosphate (PLP) concentration in peripheral blood mononuclear cells (PBMC) in young women. In the first study, women were fed 1 mg/d for the first week and 1.5, 2.1 and...
Studies of avian movement ecology afford essential insights regarding species' life histories, population dynamics, habitat and resource requirements, and other ecological relationships. While it is widely recognized that events in different stages of the annual cycle have important implications for processes in avian ecology, evolution, and conservation, challenges associated with...
Pacific sardines (Sardinops sagax) are an economically and ecologically important forage fish which transfer energy from planktonic primary producers and secondary consumers to upper trophic predators. Previous genetics studies of Pacific sardine suggested a panmictic population with a shallow genetic structure. However, more than one subpopulation within the Central California...
Spatial-temporal data arises in many applications, for example, environment sciences and disease mapping. This dissertation focuses on Gaussian spatial-temporal data. To make statistical inference for Gaussian spatial-temporal data, we developed a special class of spatial-temporal Gaussian state-space models in which the state vectors are constructed following spatial-temporal Gaussian autoregressions that...
Self-regulation skills lay the foundation for short- and long-term school success, and strengthening these skills in early childhood can have significant implications for immediate and future life outcomes (e.g., Blair & Diamond, 2008; McClelland, Acock, Piccinin, Rhea, & Stallings, 2013). A large body of literature has investigated how characteristics of...
Interferon tau (IFN-τ) is the pregnancy recognition signal secreted by the trophectodermal cells of the developing bovine embryo that prevents luteolysis and maintains critical progesterone production. Recent evidence has suggested in addition to the mechanism of action identified in the uterus, there may be a direct effect of IFN-τ on...
Forest vegetation management (FVM) is an important component of reforestation in the Pacific Northwest (PNW). Several studies have demonstrated the benefits of vegetation management on planted conifer growth and survival. However, few reports have been published on the long-term effects of FVM treatments on total ecosystem biomass accumulation and aboveground...
Dispersal facilitates population health and maintains resilience in species via gene flow. Adult dispersal occurs in some species, is often facultative, and is poorly understood, but has important management implications, particularly with respect to disease spread. Although the role of adult dispersal in spreading disease has been documented, the potential...
Covering half of South America, Brazil is one of the largest agricultural and commercial forest producers globally, with a correspondingly complex road network necessary to support the production and marketing processes of such goods. Contrary to global statistics, almost 90% of the country’s road network is classified as unsealed or...
A firm's productivity is composed of two parts: pure technical change and location-specific (agglomeration) externalities. Regional productivity is thus an aggregation of productivity of firms producing similar goods and located in a given region. International trade can affect both components of regional productivity. First, trade openness in a closed economy...
A triple layer phoswich detector was designed and assembled in the advanced radiation instrumentation lab at Oregon State University. The detector had three scintillation layers: the first one was a BC-400 for beta and conversion electron detection, the second layer was a CsI(Tl) for x-ray and gamma detection, and the...
Co-teaching and collaboration are an increasingly popular service model for English as a second language (ESL). In this model, the language specialist, sometimes called the ESL teacher, works together with a content teacher, each using their respective expertise to meet the needs of students who are identified as English learners...
In 2003 and 2004 vigor zones were delineated in two commercial vineyard
sites based on vine growth variation to assess fruit and wine phenolic chemistry. In
2004, the effects of shading on the accumulation of phenolic compounds were also
investigated. Model extractions were done from the shading experiment and the...
Rhizopogon vesiculosus is a common ectomycorrhizal (EM) symbiont of Pseudotusga menziesii (Douglas-fir) in the coast range of the Pacific Northwest. The species has been studied for its systematics, genet size, population structure, and competitive ability in several field and experimental studies. This thesis seeks to provide a more thorough characterization...
Optimization of comminuting and heating conditions for surimi gel preparation obtained from three fish species: Alaska pollock (AP) (Theragra chalcogramma), Pacific whiting (PW) (Merluccius productus), and threadfin bream (TB) (Nemipterus spp.) was the focus of this study. Three parameters during comminution were separately evaluated: chopping time, chopping temperature, and salting...
This thesis develops a manual for interpreters at six National Park Service areas established to preserve and interpret fossils of the Cenozoic Era: Fossil Butte National Monument (Wyoming), John Day Fossil Beds National Monument (Oregon), Badlands National Park (South Dakota), Florissant Fossil Beds National Monument (Colorado), Agate Fossil Beds National...
The infection biology of Mycobacterium avium subsp. paratuberculosis has recently crystallized, with added details surrounding intestinal invasion. The involvement of pathogen-derived effector proteins such as the major membrane protein, oxidoreductase, and fibronectin attachment proteins have been uncovered. Mutations constructed in this pathogen have also shed light on genes needed for...
Antimicrobial peptides are an important component of the innate immune defense. Mycobacterium avium subsp hominissuis (M. avium) is an organism that establishes contact with the respiratory and gastrointestinal mucosa as a necessary step for infection. M. avium is resistant to high concentrations of polymyxin B, a surrogate for antimicrobial peptides....
Johne's disease, caused by Mycobacterium avium subspecies paratuberculosis (MAP), is a severe chronic enteritis which affects large populations of ruminants globally. Prevention strategies to combat the spread of Johne's disease among cattle herds involve adhering to strict calving practices to ensure young susceptible animals do not come in contact with...
The expedient design of precision components in aerospace and other high-tech industries requires simulations of physical phenomena often described by partial differential equations (PDEs) without exact solutions. Modern design problems require simulations with a level of resolution difficult to achieve in reasonable amounts of time-even in effectively parallelized solvers. Though...
Pacific Coast band-tailed pigeons (Columba fasciata) have declined markedly
during the past several decades. Despite implementation of increasingly restrictive
hunting regulations, populations have shown minimal signs of recovery. I radio-marked
127 adult band-tailed pigeons in the central Oregon Coast Range in April-May of 1993-95
to document nesting chronology and productivity,...
Over the past century, life expectancy in the United States has dramatically increased leading to an increasingly aging population with people reaching, and spending more years in ‘old age’. While this unprecedented shift in population demographics represents great strides for humanity, it is not without cost. One consequence of longer...
My thesis explored the effects of environmental variability on population
dynamics and community composition of aquatic insects. Environmental variability in
the form of flow regime in streams can limit the distribution and life-history traits of
aquatic insects. I used tributaries to the McKenzie River in Oregon with dramatically
different flow...
The effect of bactericidal UV-C treatments (254 nm) on E. coli O157:H7 suspended in apple juice increased synergistically with temperature up to a threshold value. The optimum UV-C treatment temperature was 55 °C yielding a 58.9% synergistic lethal effect. Under these treatment conditions, the UV-heat (UV-H[subscript 55 °C]) lethal variability...
Three distinct methods to achieve the stereoselective synthesis of carbon-carbon bonds were investigated, encompassing: (i) the formation of axially chiral biaryl molecules by enantioselective Suzuki cross-coupling, (ii) the synthesis of α-phenylalkylboronic esters by enantioselective chain extension, and (iii) the stereospecific synthesis of alkenes by eliminative cross-coupling of enantioenriched sp³-hybridized carbenoids....
This dissertation is organized in accordance to the Manuscript Documentation Dissertation format required by Oregon State University. Chapter 1 provides a general overview of Alzheimer’s disease, defines AD as marginalized population, and explains the relevance and characteristics of qualitative research. Also, Chapter 1 provides an overview of Manuscript 1 (Chapter...
Lidar (LIght Detection And Ranging) is a remote sensing technology using light in the form of a pulsed laser, which enables efficient, accurate, 3-D data acquisition of a scene. Depending on the mounting platform, lidar data acquisition can be categorized into Airborne Laser Scanning (ALS, or airborne lidar), Terrestrial Laser...
Microplastics (MPs) are plastic particles less than 5 mm in diameter. These contaminants are increasingly found in the environment due to increased plastic production, use, and improper disposal. Detecting and measuring these contaminants in the environment has proven difficult, requiring the use of fate and transport models to assess MP...
Fundamental objectives in the field of conservation biology involve understanding the processes that influence small and declining populations and applying that knowledge to develop appropriate monitoring strategies and targeted management and conservation actions. Critical first steps in determining the relative role of factors that drive population declines involves estimation of...
Immobilized proteins are integral components of a number of important technologies, including the principal component of many biosensors, as functional coatings in various implants, as catalysts is industrial biosynthesis, and as the building blocks of next-generation nanotechnologies. Despite their ubiquity, relatively little is known about the processes that shape immobilized...
A technique is developed and tested to analyze the interaction of flowing water,
bed topography, and bedload sediment transport in meandering channels where gravel
bars are removed. The method relates the local velocity distribution, bed shear stress and
sediment transport conditions to the local bed configuration in river bends before...
Adult Chinook salmon (Oncorhynchus tshawytscha) migrate from salt water to freshwater streams to spawn. Immune responses in migrating adult salmon are thought to diminish in the run up to spawning, though the exact mechanisms for diminished immune responses remain unknown. Here we examine both adaptive and innate immune responses as...
BACKGROUND: Exocytosis is integral to root growth: trafficking components of systems that control growth (e.g., PIN
auxin transport proteins) to the plasma membrane, and secreting materials that expand the cell wall to the
apoplast. Spatiotemporal regulation of exocytosis in eukaryotes often involves the exocyst, an octameric complex
that tethers selected...
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during primary root growth in
Arabidopsis
Cole, R. A., McInally, S. A., & Fowler, J. E. (2014
Biological invasions create complex ecological
and societal issues worldwide. Most of the
knowledge about invasions comes only from successful
invaders, but less is known about which processes
determine the differential success of invasions. In this
review, we develop a framework to identify the main
dimensions driving the success and failure...
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and hypotheses
Arismendi, I., Penaluna, B. E., Dunham, J. B., de Leaniz, C. G., Soto, D., Fleming,
I
There is an urgent need to clarify how different stocks, or subpopulations of fish species, are vulnerable to fishing pressure and unfavorable ocean conditions because of the increasing demand on fisheries for human consumption. For marine fishes, the potential for high gene flow increases the difficulty in determining the number...
Tannins are a diverse group of plant-produced, polyphenolic compounds with metal-chelating and antimicrobial properties that are prevalent in many soils. Using transcriptomics, we determined that tannic acid, a form of hydrolysable tannin, broadly affects the expression of genes involved in iron and zinc homeostases, sulfur metabolism, biofilm formation, motility, and...
Surface energy balance is a major determinant of land surface temperature and the Earth's climate. To date, there is no approach that can produce effective, physically consistent, global and multi-decadal energy–water flux data over land. Net radiation (R[subscript n]) can be quantified regionally using satellite retrievals of surface reflectance and...
Inhibition of apoptotic death of macrophages by Mycobacterium tuberculosis represents an important mechanism of virulence that results in pathogen survival both in vitro and in vivo. To identify M. tuberculosis virulence determinants involved in the modulation of apoptosis, we previously screened a transposon bank of mutants in human macrophages, and...
Repetitive sequences present a challenge for genome sequence assembly, and highly similar segmental duplications may
disappear from assembled genome sequences. Having found a surprising lack of observable phenotypic deviations and
non-Mendelian segregation in Arabidopsis thaliana mutants in SEC10, a gene encoding a core subunit of the exocyst
tethering complex, we...
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Vukašinović, N., Cvrčková, F., Eliáš, M., Cole, R., Fowler, J. E., et al. (2014)
Dissecting a Hidden Gene
Background:
Over 650 million people worldwide lack access to safe water supplies, and even among those who have gained access to ‘improved’ sources, water may be seasonally unreliable, far from homes, expensive, and provide insufficient quantity. Measurement of water access at the level of communities and households remains crude, and...
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-security-ethiopia
28. Aaronson N, Alonso J, Burnam A, Lohr KN, Patrick DL, Perrin E, et al. Assessing
Understanding the pathogenic mechanisms of Mycobacterium avium subspecies paratuberculosis (MAP) and the host responses to Johne's disease is complicated by the multi-faceted disease progression, late-onset host reaction and the lack of available ex vivo infection models. We describe a novel cell culture passage model that mimics the course of infection...
Postfire logging recoups the economic value of timber killed by wildfire, but whether such forest management activity supports or impedes forest recovery in stands differing in structure from historic conditions remains unclear. The aim of this study was to determine the impact of mechanical logging after wildfire on soil bacterial...
The deep sea is often viewed as a vast, dark, remote,
and inhospitable environment, yet the deep ocean and
seafloor are crucial to our lives through the services that
they provide. Our understanding of how the deep sea functions
remains limited, but when treated synoptically, a diversity
of supporting, provisioning,...