Published June 1985. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
The fusion reaction ²⁰⁸Pb (⁵⁰Ti, xn) ²⁵⁸⁻x Rf (x = 1-3) was studied to determine PCN (probability that the mononucleus system evolves to form a compound nucleus inside the fission saddle point) and to establish the value of Wsur (survival probability) for the given reaction experimentally. The fission excitation function...
This thesis explores open questions regarding molecular forms and interactions of natural and synthetic aromatic compounds present in soils and sediments.
Plant biomass-derived black carbon (biochar) generated through incomplete natural and anthropogenic combustion processes is a major source of aromaticity in terrestrial ecosystems. Chapter one represents a detailed account of...
There is an urgent need to lower the concentration of sulfur in diesel fuels. Growing concern over environmental effects caused by burning sulfur-containing diesel has led the world to higher standards in fuel refinement. Because of these lower standards, many techniques have been researched to remove sulfur containing compounds or...
A general discrete-time, adaptive, multidimensional framework is introduced
for estimating the motion of one or several object features from their successive
non-linear projections on an image plane. The motion model consists of
a set of linear difference equations with parameters estimated recursively from
a non-linear observation equation. The model dimensionality...
A linearized model with two vertical modes has been developed to understand observed characteristics of monthly variability in the Equatorial Pacific from TOPEX/POSEIDON measurements of Sea Surface Height (SSH). The 2-mode model is obtained from an equatorial beta plane model that has been linearized about a geostrophically balanced mean flow...
Wind measurements by the National Aeronautics and Space Administration (NASA) scatterometer (NSCAT) and the SeaWinds scatterometer on the NASA QuikSCAT satellite are compared with buoy observations to establish that the accuracies of both scatterometers are essentially the same. The scatterometer measurement errors are best characterized in terms of random component...
Recent observations from spaceborne microwave sensors have revealed detailed structure of the surface
flow over the equatorial eastern Pacific in the boreal fall season. A marked acceleration of surface wind
across the northern sea surface temperature (SST) front of the cold tongue is a prominent feature of the
regional climate....
Global seasonal cycles of the wind and wind stress fields estimated from the 8-yr record (September 1999–August 2007) of wind measurements by the NASA Quick Scatterometer (QuikSCAT) are presented. While this atlas, referred to here as the Scatterometer Climatology of Ocean Winds (SCOW), consists of 12 variables, the focus here...
The impact of SST specification on low-level winds in the operational ECMWF numerical weather prediction model is investigated in the eastern tropical Pacific from comparisons of ECMWF wind stress fields with QuikSCAT satellite scatterometer observations of wind stress during the August–December cold seasons of 2000 and 2001. These two time...
Satellite measurements of surface wind stress from the QuikSCAT scatterometer and sea surface temperature (SST) from the Tropical Rainfall Measuring Mission Microwave Imager are analyzed for the three-month period 21 July–20 October 1999 to investigate ocean–atmosphere coupling in the eastern tropical Pacific. Oceanic tropical instability waves (TIWs) with periods of...
The ability of six climate models to capture the observed coupling between SST and surface wind stress in the vicinity of strong midlatitude SST fronts is analyzed. The analysis emphasizes air–sea interactions associated with ocean meanders in the eastward extensions of major western boundary current systems such as the Gulf...
Intraseasonal precipitation variability over the northeast Pacific warm pool during June–October in the National Center for Atmospheric Research Community Atmosphere Model 2.0.1 with a relaxed Arakawa–Schubert convection parameterization is found to be strongly sensitive to wind-induced variations in surface latent heat flux. A control simulation with interactive surface fluxes produces...
Madden–Julian oscillation (MJO) wind and convection anomalies are locally amplified over the northeast Pacific warm pool during June–November. Composite analysis using NCEP reanalysis data indicates that perturbation available potential energy (PAPE) production through the positive correlation of intraseasonal temperature and convective diabatic heating anomalies supports the local intensification of MJO-related...
The effects of surface wind speed and direction gradients on midlatitude surface vorticity and divergence fields associated with mesoscale sea surface temperature (SST) variability having spatial scales of 100–1000 km are investigated using vector wind observations from the SeaWinds scatterometer on the Quick Scatterometer (QuikSCAT) satellite and SST from the...
The intraseasonal variability of turbulent surface heat fluxes over the Gulf Stream extension and subtropical mode water regions of the North Atlantic, and long-term trends in these fluxes, are explored using NCEP–NCAR reanalysis. Wintertime sensible and latent heat fluxes from these surface waters are characterized by episodic high flux events...
Symbiosis is the close and protracted interaction between organisms. The molecular interactions that occur during symbiosis are complex with multiple barriers that must be overcome. Many Gram-negative, host-associated bacteria use a type III secretion system to mediate associations with their eukaryotic hosts. This secretion system is a specialized apparatus for...
Using a large eddy simulation (LES), the atmospheric boundary layer (ABL) is numerically modeled along 95°W from 8°S to 4°N during boreal autumn, and compared to observations from the East Pacific Investigation of Climate Processes in the Coupled Ocean–Atmosphere System (EPIC) 2001. Since the local ABL winds are predominantly southerly...
During boreal summer and fall, there is a strong southerly boundary layer flow across the equator into the east Pacific intertropical convergence zone (ITCZ). The modulation of this flow on synoptic to seasonal time scales is studied using an index of meridional pressure difference between the equator and the ITCZ...
The tropical Pacific Ocean is a climatically important region, home to El Niño and the Southern Oscillation. The simulation of its climate remains a challenge for global coupled ocean–atmosphere models, which suffer large biases especially in reproducing the observed meridional asymmetry across the equator in sea surface temperature (SST) and...
The midsummer drought (MSD) is a diminution in rainfall experienced during the middle of the rainy season in southern Mexico and Central America, as well as in the adjacent Caribbean, Gulf of Mexico, and eastern Pacific seas. The aim of this paper is to describe the regional characteristics of the...
The increased use of mobile wireless devices that we have recently been witnessing, such as smartphones, tablets, e-readers, and WiFi enabled devices in general, is driving an unprecedented increase in the amount of data traffic. This fast market adoption of the wireless technology along with the tremendous success of multimedia...
In eukaryotes, the defined loci on each chromosome, the centromeres, accomplish
the critical task of correct cell division. In some organisms, centromeres are
composed of a euchromatic central core region embedded in a stretch of
heterochromatin and the inheritance and maintenance of centromeres are controlled
by dynamic epigenetic phenomena. Although...
The Agricultural Model Intercomparison and Improvement Project (AgMIP) is a major international effort linking the climate, crop, and economic modeling communities with cutting-edge information technology
to produce improved crop and economic models and the next generation of climate impact projections for
the agricultural sector. The goals of AgMIP are to...
This dissertation addresses a hybrid-flow shop scheduling problem with dual resource constraints in a supply chain. Most of the traditional scheduling problems deal with machine as the only resource. However, other resources such as labor is not only required for processing jobs but are often constrained. Considering the second resource...
A computer program called SAPWOOD which possesses the
capability of performing linear or nonlinear, static or
dynamic response including seismic excitation for wood-framed
buildings with semirigid connection systems is
presented in this study. Program SAPWOOD is a modification
of the program NONSAP by adding new elements such as a
linkage...
Parallel solutions for two classes of linear programs are
presented. First we parallelized the two-phase revised simplex
algorithm and showed that it is possible to get linear improvement in
performance. The simplex algorithm is the best known algorithm for
solving linear programs, and we claim our result is the best...
Nonlinear mesoscale eddies can influence biogeochemical cycles in the upper ocean through vertical and horizontal advection of nutrients and marine organisms. The relative importance of these two processes depends on the polarity of an eddy (cyclones versus anticyclones) and the initial biological conditions of the fluid trapped in the core...
The goal of the Pacific Ocean Boundary Ecosystem and Climate Study
(POBEX) was to diagnose the large-scale climate controls on regional transport
dynamics and lower trophic marine ecosystem variability in Pacific Ocean boundary
systems. An international team of collaborators shared observational and eddy-resolving
modeling data sets collected in the Northeast...
For the first time in several years, the El Niño-Southern
Oscillation did not dominate regional climate conditions
around the globe. A weak La Niña dissipated to ENSOneutral
conditions by spring, and while El Niño appeared
to be emerging during summer, this phase never fully
developed as sea surface temperatures in...
Viruses were defined as one of the two principal types of organisms
in the biosphere, namely, as capsid-encoding organisms in
contrast to ribosome-encoding organisms, i.e., all cellular life
forms. Structurally similar, apparently homologous capsids are
present in a huge variety of icosahedral viruses that infect bacteria,
archaea, and eukaryotes. These...
This study demonstrated at the pilot-scale (50 kg) use of Douglas-fir forest harvest residue, an underutilized
forest biomass, for the production of high titer and high yield bioethanol using sulfite chemistry
without solid–liquor separation and detoxification. Sulfite Pretreatment to Overcome the Recalcitrance
of Lignocelluloses (SPORL) was directly applied to the...
Barley (Hordeum vulgare L.) possesses a large and highly repetitive genome of 5.1 Gb that has hindered the development of a complete sequence. In 2012, the International Barley Sequencing Consortium released a resource integrating whole-genome shotgun sequences with a physical and genetic framework. However, because only 6278 bacterial artificial chromosome...
The Zanzibar Channel lies between the mainland of Tanzania and Zanzibar Island in the tropical western Indian Ocean, is about 100 km long, 40 km wide, and 40 m deep, and is essential to local socioeconomic activities. This paper presents a model of the seasonal and tidal dynamics of the...
The farnesoid X receptor (FXR) regulates bile acid, lipid and glucose metabolism. Here we show that treatment of mice with glycine-b-muricholic acid (Gly-MCA) inhibits FXR signalling exclusively in intestine, and improves metabolic parameters in mouse models of obesity. Gly-MCA is a selective high-affinity FXR inhibitor that can be administered orally...
In many regions of the world, a significant portion of the surface water originates in mountain headwaters where the timing and magnitude of streamflow is largely dictated by the seasonal storage of precipitation as snowpack and long-term storage as glaciers. Accumulation, persistence, and melt of snow and ice are functions...
The farnesoid X receptor (FXR) regulates bile acid, lipid and glucose metabolism. Here we show that treatment of mice with glycine-β-muricholic acid (Gly-MCA) inhibits FXR signalling exclusively in intestine, and improves metabolic parameters in mouse models of obesity. Gly-MCA is a selective high-affinity FXR inhibitor that can be administered orally...
Here we present a phylogeny of beetles (Insecta: Coleoptera) based on DNA sequence data from eight nuclear genes, including six single-copy nuclear protein-coding genes, for 367 species representing 172 of 183 extant families. Our results refine existing knowledge of relationships among major groups of beetles. Strepsiptera was confirmed as sister...
We present a measurement of the correlation between the spins of t and t quarks produced in proton–
antiproton collisions at the Tevatron Collider at a center-of-mass energy of 1.96 TeV. We apply a matrix
element technique to dilepton and single-lepton+jets final states in data accumulated with the D0 detector...
Solar thermochemical energy storage has enormous potential for enabling cost-effective concentrated solar power (CSP). A thermochemical storage system based on a SrO/SrCO₃ carbonation cycle offers the ability to store and release high temperature (≈1200 °C) heat. The energy density of SrCO₃/SrO systems supported by zirconia-based sintering inhibitors was investigated for 15...
Empirical studies have shown that programmers spend up to one-third of their time navigating through code during debugging. Although researchers have conducted empirical studies to understand programmers’ navigation difficulties and developed tools to address those difficulties, the resulting findings tend to be loosely connected to each other. To address this...
Recognizing human actions in videos is a long-standing problem in computer vision with a wide range of applications including video surveillance, content retrieval, and sports analysis. This thesis focuses on addressing efficiency and robustness of video classification in unconstrained real-world settings. The thesis work can be broadly divided into four...
Miniaturized and portable microfluidic analytical platforms have been widely explored in the broad field of chemical analysis. The concept of microfluidics offer a number of important advantages, including low reagent consumption, low-cost detection, high sample throughput, and shorter analysis time. Semiconductor nanocrystals or quantum dots have been extensively utilized in...
The rare earth elements (REEs) have been established as powerful tracers for a range of physiochemical processes occurring in the natural environment. They also hold significant economic importance as many technological advancements are reliant upon the REEs for their unique magnetic, luminescent, and electrochemical characteristics. In sedimentary settings, understanding the...
Metabolic syndrome is a problem affecting people around the world. In a number of studies, soy intake has been documented to possess antidiabetic and anticardiovascular effect. My project is focused on the impact of the intake of compounds found within soy, the isoflavones, their impact on metabolic syndrome symptoms, and...
Subhorizontal lake shorelines allow a geodynamic test of the size and extent of a hypothesized paleolake in central Tibet, the East Qiangtang Lake (EQL), during the last interglacial period (marine isotope stage (MIS) 5e). Reconstructions based on relict lake deposits suggest that the EQL would have been ~400 m deep...
Background: Antimicrobial peptides (AMPs) are synthesized and secreted by immune and epithelial cells that are constantly exposed to environmental microbes. AMPs are essential for barrier defense and deficiencies lead to increased susceptibility to infection. In addition to their ability to disrupt the integrity of bacterial, viral and fungal membranes, AMPs...
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, Peng L, Fang X, Yin X, Xu N, Cen P (2006) Recent advances in the
research and development of human
Chromosomal rearrangements may complicate construction of Arabidopsis with multiple TDNA-insertion mutations. Here, crossing two lines homozygous for insertions in AtREV3 and AtPOLH (chromosomes I and V, respectively) and selfing F1 plants yielded non-Mendelian F2 genotype distributions: frequencies of +/++/+ and 1/1 2/2 progeny were only 0.42 and 0.25%. However, the...
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Fluorescence in situ hybridization
RB
T-DNA right border
LB
T-DNA left border
CEN
Centromere
LETEL
Left
The farnesoid X receptor (FXR) regulates bile acid, lipid and glucose metabolism. Here we
show that treatment of mice with glycine-b-muricholic acid (Gly-MCA) inhibits FXR signalling
exclusively in intestine, and improves metabolic parameters in mouse models of obesity.
Gly-MCA is a selective high-affinity FXR inhibitor that can be administered orally...
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obesity-related metabolic dysfunction
Jiang, C., Xie, C., Lv, Y., Li, J., Krausz, K. W., & Gonzalez, F. J
The farnesoid X receptor (FXR) regulates bile acid, lipid and glucose metabolism. Here we
show that treatment of mice with glycine-b-muricholic acid (Gly-MCA) inhibits FXR signalling
exclusively in intestine, and improves metabolic parameters in mouse models of obesity.
Gly-MCA is a selective high-affinity FXR inhibitor that can be administered orally...
The farnesoid X receptor (FXR) regulates bile acid, lipid and glucose metabolism. Here we show that treatment of mice with glycine-β-muricholic acid (Gly-MCA) inhibits FXR signalling exclusively in intestine, and improves metabolic parameters in mouse models of obesity. Gly-MCA is a selective high-affinity FXR inhibitor that can be administered orally...
Full Text:
obesity-related metabolic dysfunction
Jiang, C., Xie, C., Lv, Y., Li, J., Krausz, K. W., Shi, J
The farnesoid X receptor (FXR) regulates bile acid, lipid and glucose metabolism. Here we show that treatment of mice with glycine-β-muricholic acid (Gly-MCA) inhibits FXR signalling exclusively in intestine, and improves metabolic parameters in mouse models of obesity. Gly-MCA is a selective high-affinity FXR inhibitor that can be administered orally...
In response to genotoxic stress, ATR and ATM kinases phosphorylate H2A in fungi and H2AX in animals on a C-terminal serine.
The resulting modified histone, called γH2A, recruits chromatin-binding proteins that stabilize stalled replication forks or promote
DNA double-strand-break repair. To identify genomic loci that might be prone to replication...
Simulations from a regional climate model (RCM) as part of a superensemble experiment were compared with observations of surface meteorological variables over the western United States. The RCM is the Hadley Centre Regional Climate Model, version 3, with improved physics parameterizations (HadRM3P) run at 25-km resolution and nested within the...
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(Harris et al. 2014).
The fifth dataset was the Climate Prediction Cen-
ter (CPC) 0.258 3 0.258 daily
The Kenyan-Tanzanian coastal region in the western Indian Ocean faces several environmental challenges including coral reef conservation, fisheries management, coastal erosion, and nearshore pollution. The region lacks hydrodynamic records and oceanographic studies at adequate spatial and temporal scales to provide information relevant to the local environmental issues. We have developed...
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Rai, 2008; Mishra et al., 2007; Xie et al., 2002; Lee and Marotzke, 1998; Anderson
et al., 1991] that
Signal transduction within and between cells is at the core of biological activity in all living systems. Signaling networks are required for regulating biological functions, including growth, development and survival. Deregulation of signaling cascades has been linked to chronic and acute diseases and disorders This thesis focuses on mass spectrometry...
Soft keyboards come in different shapes, sizes, and layouts. Each layout is designed to help the users in different inputting tasks. Most of these layouts, however, focus on general text entry as opposed to computer programs. This dissertation addresses the problems with current input mechanisms on touchscreen devices. The dissertation...
For spatial data visualization, we approach two problems and provide solutions: heat map resolution selection, and heat map confidence interval presentation. Analysts often present spatial data in gridded heat maps, at some chosen resolution. However, many data types vary in density across the domain. We develop variable-resolution heat maps to...
DNA is often described as the “blueprint for life”. In eukaryotes this information is contained within linear chromosomes of varying size and number. During cell division, the chromosomes must be faithfully segregated into each daughter cell to avoid disease and sustain life. This process is carried out by the kinetochore...
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Deletion of cen-o and knl-1 results in a temperature-sensitive slow growth
phenotype
We present a new high-precision, high-resolution record of atmospheric methane from the West Antarctic Ice Sheet (WAIS) Divide ice core covering 1000–1800 C.E., a time period known as the late preindustrial Holocene (LPIH). The results are consistent with previous measurements from the Law Dome ice core, the only other high-resolution...
Boreal summer intraseasonal (30–90-day time scale) sea surface temperature (SST) variability in the east Pacific warm pool is examined using Tropical Rainfall Measuring Mission (TRMM) Microwave Imager (TMI) sea surface temperatures during 1998–2005. Intraseasonal SST variance maximizes at two locations in the warm pool: in the vicinity of 9°N, 92°W...
Warmer SST and more rain in the Northern Hemisphere are observed year-round in the tropical eastern Pacific with southerly wind crossing the equator toward the atmospheric heating. The southerlies are minimal during boreal spring, when two precipitation maxima straddle the equator. Fourteen atmosphere–ocean coupled GCMs from the Coupled Model Intercomparison...
This paper presents an evaluation and validation of the Naval Research Laboratory's COAMPS® real-time forecasts during the VOCALS-REx over the area off the west coast of Chile/Peru in the Southeast Pacific during October and November 2008. The analyses focus on the marine boundary layer (MBL) structure. These forecasts are compared...
The VAMOS Ocean-Cloud-Atmosphere-Land Study Regional Experiment (VOCALS-REx) was an international field program designed to make observations of poorly understood but critical components of the coupled climate system of the southeast Pacific. This region is characterized by strong coastal upwelling, the coolest SSTs in the tropical belt, and is home to...
This study was to determine whether postharvest hydrogen sulfide (H2S) fumigation effected surface pitting development of 'Lapins' and 'Regina' cherries after cold storage, and if so, how it minimizes surface pitting injury and its relation to cell wall metabolism. Fruit were exposed to H2S gas released from an aqueous solution...
Infections of fungi by mycoviruses are often symptomless but sometimes also fatal, as they perturb sporulation, growth, and, if applicable, virulence of the fungal host. Hypovirulence-inducing mycoviruses, therefore, represent a powerful means to defeat fungal epidemics on crop plants. Infection with Fusarium graminearum virus China 9 (FgV-ch9), a double-stranded RNA...
The cycloundecapeptide cyclosporin A (CsA) was first isolated from the insect-pathogenic fungus Tolypocladium inflatum for its antifungal activity and later developed as an immunosuppressant drug. However, the full biosynthetic mechanism of CsA remains unknown and has puzzled researchers for decades. In this study, the biosynthetic gene cluster is suggested to...
The cotton bollworm, Helicoverpa armigera (Hubner) is one of the most serious insect pest species to evolve resistance against many insecticides from different chemical classes. This species has evolved resistance to the pyrethroid insecticides across its native range and is becoming a truly global pest after establishing in South America...
Hibiscus and lilacs (Syringa spp.) are economically important nursery crops in the US that accounted for 4.5 million units ($30 million) and 2 million units ($20 million), respectively (USDA, 2016). To maintain and expand the market share of ornamental plants such as lilacs and Hibiscus, novel performance, floral ornamental value,...
Currently, forecasts produced by the Oregon-Washington (OR-WA) Coastal Ocean Forecast System are constrained by assimilation of only surface observations. The 4-dimensional variational (4DVAR) data assimilation (DA) algorithm is utilized to combine the model and the data, with the time-independent forecast ("background'') error covariance B. In this study, two possible improvements...
Controlled atmosphere (CA) allows long-term storage of European pears (Pyrus communis L.) without chemical treatment to deliver a natural melting (buttery and juicy) texture for consumers. However, the relationship between textural properties and cell wall metabolism as influenced by O-2 regimes has not been comprehensively determined. In this study, 'Golden...
As the power system grows larger and more complex, real-time monitoring and control become very significant in order to achieve reliable operation of the power system. Before any security assessment can be made or control actions are taken, the reliable estimate of the existing state of the system must be...
For mid-rise and high rise buildings, slender reinforced concrete (RC) structural walls are commonly used as the main structural elements to resist lateral applied loads in high seismically areas around the globe. These RC structural walls can provide substantial deformation capacity, stiffness, and lateral strength through the contribution of their...
There is growing commercial interest in the use of multiagent systems in real world applications. Some examples include inventory management in warehouses, smart homes, planetary exploration, search and rescue, air-traffic management and autonomous transportation systems. However, multiagent coordination is an extremely challenging problem. First, information relevant for coordination is often...
Many pharmaceuticals have negative effects on biota when released into the environment. For example, recent work has shown that the commonly prescribed antidiabetic drug, metformin (N,N-dimethylbiguanide), has endocrine disrupting effects on fish. However, effects of metformin on aquatic primary producers are poorly known. We exposed cultured isolates of a freshwater...
Standard geostatistical models used in abundance prediction assume that observed counts on each site are made without error. However, in some wildlife populations, assuming perfect detection of animal or plant counts is unrealistic.
We first construct an adjustment to a finite population block kriging (FPBK) estimator that allows the possibility...
The use of remote sensing techniques in coastal science and engineering has rapidly increased in the past few decades. This dissertation outlines new remote sensing tools using two remote sensing technologies (lidar and X-band marine radar) along with two nearshore hydrodynamic and morphodynamic analyses supported or motivated by these remote...
Cephalopod-inspired soft robot arms have been studied as a new type of manipulator. These arms have been proposed for reach and grab tasks, underwater locomotion via swimming and walking, and robotic surgery. However, the capabilities of existing soft arms are limited to simple motions and light loads. Arm design has...
The discovery of GW170817 provided the first empirical evidence that merging binary neutron star systems are both progenitors of short gamma-ray bursts, as well as the primary sites of the nucleosynthetic rapid-neutron capture process. Initially detected as gravitational wave (GW) and gamma-ray burst (GRB) triggers, GW170817 was well-localized and follow-up...
Information about named entities (real-world objects) is usually harvested from different sources and organized as a multiple relational directed graph in Knowledge Bases (KBs). KBs play essential roles in many NLP modules including question answering, fact-checking, search engines, etc. KBs are big but still incomplete: relational information among entities is...