A table containing data from random sampling plots in 87 randomly located aspen stands in northern Yellowstone, repeating measurements by Painter et al. (2014). Stands were relocated using GPS coordinates from 2012. Each stand contained one plot 2x30 m, extending from the live, dead or fallen tree nearest the GPS...
Historical forest harvesting practices were reviewed in the original Alsea Watershed Study where they found increased energy
loading to the stream and produced higher stream temperatures. This was an important early research site that led to the
development of contemporary forest management practices to protect water quality and fish habitat...
This dataset contains records of identified benthic and aquatic emergent invertebrates from pre-timber harvest, post-timber harvest, and reference (no harvest) collection sites in the Hinkle Creek watershed. A variety of fish-bearing tributaries, fishless tributaries, and mainstem creek sites were sampled. Benthic invertebrates were collected using Serber nets and emergent adults...
This dataset consists of vascular plant species cover estimates collected from 12, 1x1-m quadrats, nested within 15x15-m plots that excluded and were open to wild ungulate access. The wild ungulate exclusion experiment was conducted in young forest plantations (<6 years old), each randomly assigned to one of 3 silvicultural herbicide...
The integration of satellite image data with forest inventory plot data is a popular approach for mapping forest vegetation over large regions. Several methodological choices regarding spatial scale, mostly related to spatial resolution or grain, can profoundly influence forest maps developed from plot and imagery data. Yet often the consequences...
Prevention of wellbore CO₂ leakage is a critical component of any successful carbon capture, utilization, and storage program. Sporosarcina pasteurii is a bacterium that has demonstrated the potential ability to seal a compromised wellbore through the enzymatic precipitation of CaCO₃. Here we investigate the growth of S. pasteurii in a...
Extensive first-pass metabolism of ingested bisphenol A (BPA) in the gastro-intestinal tract and liver restricts blood concentrations of bioactive BPA to < 1% of total BPA in humans and non-human primates. Absorption of ingested BPA through non-metabolizing tissues of the oral cavity, recently demonstrated in dogs, could lead to the...
By inverting EarthScope long-period magnetotelluric (MT) data from the southeastern United States (SEUS), we obtain electrical conductivity images that provides key insights into the geodynamics of this region. Significantly, we resolve a highly electrically resistive block that extends to mantle depths beneath the modern Piedmont and Coastal Plain physiographic provinces....
This data contains results from direct numerical simulations of premixed, three-dimensional, turbulent toluene/air flames, using the multicomponent and mixture-averaged diffusion models. In particular, this dataset contains information about diffusion flux angles and magnitudes. We performed the simulations using the finite-difference code NGA; simulation details are described completely in the associated...
This data contains results from direct numerical simulations of premixed, three-dimensional, turbulent n-heptane/air flames, using the multicomponent and mixture-averaged diffusion models. In particular, this dataset contains information about diffusion flux angles and magnitudes. We performed the simulations using the finite-difference code NGA; simulation details are described completely in the associated...
This data contains results from direct numerical simulations of premixed, two-dimensional unsteady and three-dimensional, turbulent hydrogen/air flames, using the multicomponent and mixture-averaged diffusion models. In particular, this dataset contains information about diffusion flux angles and magnitudes. We performed the simulations using the finite-difference code NGA; simulation details are described completely...
These datasets document observations of pronghorn crossing structures in the Greater Yellowstone Ecosystem between 2011 and 2014. These datasets include information about the probability of pronghorn crossing the structures and their behaviors around the structures themselves (e.g., sustained vigilance, stress).
The Willamette Valley, bounded on the west by the Coast Range and on the east by the Cascade Mountains, is the largest river valley completely confined to Oregon. The fertile valley soils combined with a temperate, marine climate create ideal agronomic conditions for seed production. Historically, seed cropping systems in...
This data contains results from direct numerical simulations of three-dimensional, premixed, hydrogen/air flames, using the mixture-averaged diffusion model. We performed the simulations using the finite-difference code NGA; simulation details are described completely in the associated article.
This repository contains the data associated with the paper "A Hierarchy of Models for Simulating Experimental Results from a 3D Heterogeneous Porous Medium" to be published in Advances in Water Resources and currently available as a preprint on arXiv (https://arxiv.org/abs/1802.01978). These data include the information required to reproduce the results...
The content of this Technical Report is related to: Peachey, E., Doohan, D., & Koch, T. (2012). Selectivity of fomesafen based systems for preemergence weed control in cucurbit crops. Crop Protection, 40, 91-97. doi: 10.1016/j.cropro.2012.04.003.
These data set includes calibrated predictions of Depth, Velocity and Shear Stress for seven discharges (0.4 to 3.4m^3, equivalent to 0.12 Qbf to Qbf) at Oak Creek using the Flow and Sediment Transport with Morphological Evolution of Channels (FaSTMECH).
This data contains results from direct numerical simulations of three-dimensional, premixed, hydrogen/air flames, using the multicomponent diffusion model. We performed the simulations using the finite-difference code NGA; simulation details are described completely in the associated article.
This data contains large supplementary tables for the PhD dissertation of Dariia Vyshenska. Title of the Dissertation: "Identification of Cervical Cancer Key Regulators using Network Biology Approach"
The dataset contains data from two types of research.
Research #1: Identification of bacterial regulators of cervical cancer gene expression. It contains microbial...
In many regions of the world, forest management has shifted from practices emphasizing timber production to more sustainable harvesting that integrates ecological values, including maintenance of biodiversity, wildlife habitat, and ecological goods and services. To this end, management strategies emphasize retention of stand structures that meet the needs of forest-obligate...
Full Text:
://dx.doi.org/10.1016/j.foreco.2013.10.026
DOI of original article: http://dx.doi.org/10.1016/j.foreco
Cytochrome B sequence data (FASTA format) from the paper “Seasonal distribution and environmental associations among late larval and juvenile rockfish (Sebastes spp.) off Oregon and Washington: new insights based on genetics”. The data was generated from a sample of 2534 unknown, field collected late-larval and juvenile rockfishes from the Pacific...
Koi herpesvirus (KHV) is highly pathogenic to Cyprinus carpio. KHV can also become latent in recovered fish and reactivate from latency under stressful conditions. Understanding KHV latency is important for development of strategies against herpesvirus latent infection. Our previous studies found KHV ORF6 mRNA is detectable during latent infection. In...
We propose a mathematical formulation for strategic relay network design and dispatching method selection for full truckload transportation. The proposed model minimizes total transportation and installation costs of a mixed fleet dispatching system combining relay network and point-to-point dispatching. Operational constraints such as maximum driver tour length and load circuity...
The relationship between annual growth in the catches of fishing nations and the quality of the institutions of those nations is analyzed. Catch volumes are used as a proxy for development, since economic performance indicators based on a common set of definitions do not exist. 49 major fishing nations were...
This paper reports the feasibility of using surface mount adhesives to produce low temperature microchannel arrays in a wide variety of metals. Sheet metal embossing and chemical etching processes have been used to produce sealing bosses that eliminate channel laminae, resulting in approximately 50% material savings over traditional methods. An...
OBJECTIVES: Despite documented efficacy of injury prevention programs (IPPs) to reduce sport-related lower extremity injury risk, there is evidence of a lack of widespread IPP adoption by high school coaches. This study identified factors related to non-adoption of IPPs by assessing coaches’ knowledge, attitudes, and behaviors related to prevention programs...
Pyrodinium bahamense Plate 1906 is a tropical to subtropical dinoflagellate that can cause paralytic shellfish poisoning (PSP). Based on differences in the morphology of the motile stage, as well as geographic distribution, this species was separated into two varieties, the toxic var. compressum and the non-toxic var. bahamense by Steidinger...
The 12-site National Fire and Fire Surrogate study (FFS) was a multivariate experiment that evaluated ecological consequences of alternative fuel-reduction treatments in seasonally dry forests of the US. Each site was a replicated experiment with a common design that compared an un-manipulated control, prescribed fire, mechanical and mechanical + fire...
Despite the importance of fire for maintaining the health of many ecosystems, the social and economic costs of wildfires have risen sharply in recent years. Across the western United States, historical land and fire management practices combined with climate change and modern human development pressures, are contributing to increased wildfire...
This is an author's peer-reviewed final manuscript, as accepted by the publisher. The published article is copyrighted by Elsevier and can be found at: https://doi.org/10.1016/j.elspec.2012.12.004
Recent climate projections predict more frequent and severe drought conditions in western Oregon which is a threat to forest health, productivity, and structure. Land managers are increasingly concerned with how to create forest drought resistance: a tree or stand’s ability to maintain its growth rates during a drought, and resilience:...
The extent and severity of wildfires in forested regions are increasing throughout many regions on the planet, including western North America. High-severity wildfires directly affect soils and vegetation by altering soil hydraulic properties, reducing soil organic matter, exporting carbon and nitrogen, and killing trees and understory vegetation. These impacts can...
Wildfires pose complex challenges to policymakers and fire agencies. Fuel break networks and area-wide fuel treatments are risk-management options to reduce losses from large fires. Two fuel management scenarios covering 3% of the fire-prone Algarve region of Portugal and differing in the intensity of treatment in 120-m wide fuel breaks...
Full Text:
Management 211, 83–96. doi:10.1016/
J.FORECO.2005.01.034
Agee JK, Bahro BB, Finney MA, Omi PN, Sapsis DB
The aim of this research was to provide forest managers and researchers with a better understanding of individual tree defenses and tree responses to disturbances, within a Collaborative Forest Landscape Restoration Program area. Forest restoration often aims to increase stand-level resistance to uncharacteristic changes, and stand-level resistance begins with tree-level...
As global climate changes over the next century, forest productivity is expected to change as well. Using PRISM climate and productivity data measured on a grid of 3356 plots, we developed a simultaneous autoregressive (SAR) model to estimate the impacts of climate change on potential productivity of Pacific Northwest (PNW)...
We studied stand development in three distinct forest types in southwestern Oregon using six stands
each in uncut and clear-felled old-growth stands and nearby young stands (18 total). Old-growth stands
showed a wide range of tree ages (>300 years) and low tree densities for several centuries; rapid early
growth produced...
Quaking aspens (Populus tremuloides Michx.) are found in diverse habitats throughout North America. While the biogeography of aspens' distribution has been documented, the drivers of the phenotypic diversity of aspen are still being explored. In our study, we examined differences in climate between northern and southwestern populations of aspen, finding...
Full Text:
tremuloides in North America linked to
climate. Forest Ecology and Management, 299, 35-51. doi: DOI
10.1016
New detrital mica ages from the Umpqua Group of the Oregon Coast Range provide constraints on models of Eocene sedimentation. Based on sandstone petrography, previous studies assert that the Klamath Mountains to the south are the most likely source region for Umpqua Group sedimentary provenance. However, the presence of Late...
Widespread habitat degradation and uncharacteristic fire, insect, and disease outbreaks in forests across
the western United States have led to highly publicized calls to increase the pace and scale of forest restoration.
Despite these calls, we frequently lack a comprehensive understanding of forest restoration
needs. In this study we demonstrate...
Full Text:
across Oregon and Washington, USA. Forest Ecology and Management, 335,
37-50. doi:10.1016/j.foreco
The spatial distribution of forest disturbance is commonly calculated using a satellite imagery-driven bi- or tri-temporal change analysis. Working in Colombia’s Cordillera de los Picachos National Natural Park – a region of consistent cloud cover and dramatic topographic relief – a change assessment with such infrequent observations cannot capture long-term...
In this thesis, we first examine the principle hypotheses behind the improved exotic growth of select timber species, and the evidence for each, with special focus on studies which examine growth between several ranges of a species. We find that literature suggests environmental factors directly tied to net primary production...
Early establishment of competing vegetation often presents an obstacle to the success of planted white spruce (Picea glauca (Moench) Voss) seedlings. We followed growth and development of white spruce and associated vegetation for up to 17 years in Alaska's boreal forests to quantify roles of overtopping plant cover in suppressing...
Temperate coniferous forests, such as those that cover vast areas of the western US and Canada, have evolved to depend on cycles of disturbance for succession of species and overall ecosystem maintenance. Many of these forest systems are managed, often for timber production, where disturbances are of anthropogenic origin and...
Fuel accumulation and climate shifts are predicted to increase the frequency of high-severity fires in pon-derosa pine (Pinus ponderosa) forests of central Oregon. The combustion of fuels containing large downedwood can result in intense soil heating, alteration of soil properties, and mortality of microbes. Previousstudies show ectomycorrhizal fungi (EMF) improve...
Measurements of physical tree crown dimensions were of subjective character in the past, even though they can be considered important for the management of many silvicultural operations, such as timing of thinning operations. In our study we investigated if and how measures of physical crown dimensions of trees differed when...
Wildfires can create alternative pathways for forest development, and wildfires have expanded in size, frequency, intensity, and severity across the western United States. The purpose of this paper is to compare forest development of a mature Douglas-fir forest in western Oregon across fire severities. Postburn field measurements were collected in...
The intensity and scale of wildfires has increased throughout the Pacific Northwest in recent decades, especially within the last decade, destroying vast amounts of valuable resources and assets. This trend is predicted to remain or even magnify due climate change, growing population, increased housing density. Furthermore, the associated stress of...
Quaking aspen, Populus tremuloides, has experienced severe declines in recent years in part due to the effects of changing climate and extreme drought. As the dominant deciduous tree in Western North American forests, aspen plays a critical role in forest biodiversity and ecosystem function. Therefore, the persistence of this species...
Headwater streams represent the majority of the drainage area of a river network and provide many critical functions supporting aquatic and terrestrial ecosystem health. The riparian zones that surround these streams are transitional areas between terrestrial and stream ecosystems, which provide key habitat for aquatic and terrestrial organisms, especially during...
Fuel accumulation and climate shifts are predicted to increase the frequency of high-severity fires in ponderosa pine (Pinus ponderosa Dougl. ex Laws) forests of central Oregon. The combustion of fuels containing large downed wood can result in intense soil heating, alteration of soil properties, and mortality of microbes. Previous studies...