The influence of pH on phytoplankton physiology is an important facet of the body of research on ocean acidification. We provide data developed during the design and implementation of a novel pHstat system capable of maintaining both static and dynamic pH environments in a laboratory setting. These data both help...
Laboratory investigations of physiological processes in phytoplankton require precise control of experimental conditions. Chemostats customized to control and maintain stable pH levels (pHstats) are ideally suited for investigations of the effects of pH on phytoplankton physiology, for example in context of ocean acidification. Here we designed and constructed a simple,...
The maintenance of pH homeostasis is critical for a variety of cellular metabolic processes. Although ocean acidification is likely to influence cellular metabolism and energy balance, the degree to which intracellular pH in phytoplankton differs from the external environment under varying environmental pH levels is not well characterized. While there...
Since the Industrial Revolution, surface ocean pH has declined due to the input of anthropogenically derived carbon dioxide, termed ocean acidification. Examinations of phytoplankton physiology in the face of changing pH are becoming more important as anthropogenically-driven pH decreases in the surface ocean progress (termed ocean acidification). Previous research has...
• Compression wood has been shown to reduce stem permeability, but it is not known to what extent it affects leaf‐level processes. Here, we report whole‐plant hydraulic properties of Douglas‐fir (Pseudotsuga menziesii) seedlings induced to form varying amounts of compression wood.
• Seedlings were grown under three bending treatments to...
This classification is an update of the 2004 classification of native vegetation of Oregon by Kagan, Christy, Murray and Titus. As before, this classification lists the native plant associations known to occur in Oregon, and includes both successional and climax vegetation types that were part of the presettlement landscape of...
The Bowen ratio, the ratio of the turbulent surface fluxes of sensible (Hₛ) and latent (Hₗ) heat, Bo ≡ Hₛ/Hₗ, occurs throughout micrometeorology. It finds application in the Bowen ratio and energy budget method, where it provides both turbulent heat fluxes when only the available energy at the surface is...
As juvenile salmon migrate from freshwater into saltwater, physiological changes must occur to allow fish to osmoregulate in the marine environment. Juvenile spring Chinook salmon migrate to the ocean at different time periods, most notably in the fall (August – November; i.e. fall smolts) and spring (February – May; i.e....
Full Text:
Rachel M. Palmer*, E.J. Billman*, C. Danley*, C. Sharpe**, D.L. G. Noakes***, & C.B. Schreck
As juvenile salmon migrate from freshwater into saltwater, physiological changes must occur to allow fish to osmoregulate in the marine environment. Juvenile spring Chinook salmon migrate to the ocean at different time periods, most notably in the fall (August – November; i.e. fall smolts) and spring (February – May; i.e....
Full Text:
juvenile spring Chinook salmon
Rachel M. Palmer*, E.J. Billman*, C. Danley*, C. Sharpe**, D.L. G. Noakes
Heartwood durability of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco var. menziesii) was studied as a function of vertical and radial position in boles of trees with a wide range of leaf area/sapwood area ratios. Six 34- year-old trees were harvested from each of three plots established 14 years before: very dense,...
Bighorn sheep (Ovis canadensis) were not known to live on Tiburón Island, the largest island in the Gulf of California and
Mexico, prior to the surprisingly successful introduction of 20 individuals as a conservation measure in 1975. Today, a stable
island population of ~500 sheep supports limited big game hunting...
Full Text:
) on a Desert Island
Benjamin T. Wilder1*, Julio L. Betancourt2, Clinton W. Epps3, Rachel S. Crowhurst3
Bighorn sheep (Ovis canadensis) were not known to live on Tiburón Island, the largest island in the Gulf of California and
Mexico, prior to the surprisingly successful introduction of 20 individuals as a conservation measure in 1975. Today, a stable
island population of ~500 sheep supports limited big game hunting...
As juvenile salmon migrate from freshwater into saltwater, physiological changes must occur to allow fish to osmoregulate in the marine environment. Juvenile spring Chinook salmon migrate to the ocean at different time periods, most notably in the fall (August – November; i.e. fall smolts) and spring (February – May; i.e....
Bighorn sheep (Ovis canadensis) were not known to live on Tiburón Island, the largest island in the Gulf of California and
Mexico, prior to the surprisingly successful introduction of 20 individuals as a conservation measure in 1975. Today, a stable
island population of ~500 sheep supports limited big game hunting...
Mantel-based tests have been the primary analytical methods for understanding how landscape features influence observed spatial genetic structure. Simulation studies examining Mantel-based approaches have highlighted major challenges associated with the use of such tests and fueled debate on when the Mantel test is appropriate for landscape genetics studies. We aim...
Full Text:
working directory)
}
Python Code for CDPOP Software
# CDPOP.py
# Author: Erin L Landguth
Mantel-based tests have been the primary analytical methods for understanding how landscape features influence observed spatial genetic structure. Simulation studies examining Mantel-based approaches have highlighted major challenges associated with the use of such tests and fueled debate on when the Mantel test is appropriate for landscape genetics studies. We aim...
Mantel-based tests have been the primary analytical methods for understanding how landscape features influence observed spatial genetic structure. Simulation studies examining Mantel-based approaches have highlighted major challenges associated with the use of such tests and fueled debate on when the Mantel test is appropriate for landscape genetics studies. We aim...
Full Text:
. Creech2, Katie L. Millette3, Rachel S. Crowhurst2, Robert A. Long4,
Helene H. Wagner5, Niko Balkenhol6
Mantel-based tests have been the primary analytical methods for understanding how landscape features influence observed spatial genetic structure. Simulation studies examining Mantel-based approaches have highlighted major challenges associated with the use of such tests and fueled debate on when the Mantel test is appropriate for landscape genetics studies. We aim...
Background: Epidemiological studies of disease exposure risk are frequently based on observational, cross-sectional data, and use statistical approaches as crucial tools for formalising causal processes and making predictions of exposure risks. However, an acknowledged limitation of traditional models is that the inferred relationships are correlational, cannot easily distinguish direct from...
Landscape fire succession models (LFSMs) predict spatially–explicit interactions between vegetation
succession and disturbance, but these models have yet to fully integrate ungulate herbivory as a driver of
their processes. We modified a complex LFSM, FireBGCv2, to include a multi-species herbivory module,
GrazeBGC. The system is novel in that it explicitly...
A wealth of information on plant anatomy and morphology is available in the current and historical literature, and molecular biologists are producing massive amounts of transcriptome and genome data that can be used to gain better insights into the development, evolution, ecology, and physiological function of plant anatomical attributes. Integrating...
The draft genome of Streptomyces sp. strain ventii, an environmental isolate recovered from deep-sea hydrothermal vents in the Pacific Ocean, is presented along with the resequenced draft genomes of the type strains Streptomyces bohaiensis 11A07 and Streptomyces lonarensis NCL 716.
The reality confronting ecosystem managers today is one of heterogeneous, rapidly transforming landscapes,
particularly in the areas more affected by urban and agricultural development. A landscape management
framework that incorporates all systems, across the spectrum of degrees of alteration, provides a fuller set of
options for how and when to...
We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades,...
