Steelhead and rainbow trout are common names for marine-migratory (anadromous) and freshwater-resident forms of Oncorhynchus mykiss, a partially migratory salmonid fish. Anadromous and resident forms are sympatric and can produce offspring with a life history different from their own (i.e., steelhead parents can produce rainbow trout offspring and vice versa)....
We manipulated food inputs among patches within experimental streams to determine how variation in foraging behavior influenced demographic and phenotypic responses of juvenile steelhead trout (Oncorhynchus mykiss) to the spatial predictability of food resources. Demographic responses included compensatory adjustments in fish abundance, mean fish size, and size inequality. These responses...
We reared juvenile Oncorhychus mykiss with low and high standard metabolic rates (SMR) under alternative thermal regimes to determine how these proximate factors influence life histories in a partially migratory salmonid fish. High SMR significantly decreased rates of freshwater maturation and increased rates of smoltification in females, but not males,...
The use of passive integrated transponder (PIT) tags in ecological studies is increasingly common, but evaluations of their performance and range of application in the field are still emerging. Here, we compare habitat unit–scale abundance estimates of PIT-tagged juvenile coho salmon Oncorhynchus kisutch and steelhead O. mykiss derived from multiple-pass...
In partially migratory species, such as Oncorhynchus mykiss, the emergence of life history phenotypes is often attributed
to fitness trade-offs associated with growth and survival. Fitness trade-offs can be linked to reproductive tactics that vary between
the sexes, as well as the influence of environmental conditions. We found that O....
Oncorhynchus mykiss form partially migratory populations with anadromous fish that undergo marine migrations and residents that complete their life cycle in fresh water. Many populations’ anadromous components are threatened or endangered, prompting interest in understanding ecological and evolutionary processes underlying anadromy and residency. In this paper, we synthesize information to...
Reproductive tactics and migratory strategies in Pacific and Atlantic salmonines are inextricably linked through the effects of migration (or lack thereof) on age and size at maturity. In this review, we focus on the ecological and evolutionary patterns of freshwater maturation in salmonines, a key process resulting in the diversification...
Currently, the only anthrax vaccine licensed for human use in the United States is the Anthrax-vaccine-absorbed (AVA or Biothrax®). AVA suffers from several drawbacks, including a complicated and lengthy dosing schedule that requires six initial injections administered over eighteen months, followed by annual boosters. Therefore, a new generation anthrax vaccine...
Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
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Diminish Coldwater
Habitat in Southern Appalachian Mountain Streams
McDonnell, T. C., Sloat, M. R
Nanotechnologies continue to permeate a multitude of industries, with diverse applications ranging from pesticides to fuel additives. The unusual behavior of nanomaterials that drives their innovation also complicates the job of toxicologists tasked with assessing their potential environmental and public health impacts. This dissertation investigates the underlying reasons for uncertainty...
This mixed methods qualitative thesis examined the relationships between co-mentors in the Faculty Student Mentor Program at Oregon State University through the reported experiences/perceptions of peer mentors. The researcher gathered information for this study utilizing data from two focus groups, a survey of peer mentors, and a review of relevant...
This dissertation focuses on personal privacy in human-robot interaction, which we call "privacy-sensitive robotics." Our understanding of "privacy" is very broad, including not just information privacy but also physical, psychological, and social privacy. We begin by surveying the scholarly literature on privacy and talking about why it applies to interactions...
Advancing the understanding of natural resource management is an important step in mitigating the effects of human activity on the environment, and ensuring efficient outcomes for many sectors of the economy. As humanity’s role in the natural world becomes better understood, the importance of interdisciplinary modeling has grown in leaps...
A Finite Element Model of a deployed Fiber-Optic Micro Cable (FOMC) was performed using the marine cable modeling software, OrcaFlex. The focus of this study was a parametric analysis of a two-part, towed cable array with the FOMC dragged behind a depressor and connected to a drogue chute. Length-to-diameter ratios...
Medical Isotopes are a necessity in modern medicine for cancer treatments and medical imaging. In order to ensure that the needs and demands are met for the medical procedures, facilities are put in place to produce these isotopes. There are over 25 different isotopes of interest being produced by more...
The purpose of this study was to develop a slow fashion design model using the house of quality model (HOQ) to provide designers an opportunity to improve the overall sustainability of an apparel product. Slow fashion is based on the slow food movement that supports the consumption of food that...
As electronics reach nanometer size scales, new avenues of integrating biology and electronics become available. For example, nanoscale field-effect transistors have been integrated with single neurons to detect neural activity. Researchers have also used nanoscale materials to build electronic ears and noses. Another exciting development is the use of nanoscale...
Prairies were once the dominant vegetation type in Oregon's Willamette Valley. Land use conversion, fire suppression, succession, and invasive species have reduced Willamette Valley prairies to less than 1% of their historical area. The remnant prairies that persist today are small in size and are highly fragmented. Marginal strips of...
Despite recent efforts to improve site safety, construction still accounts for a disproportionate injury and illness rate. According to the 2007 injury and illness data released by the National Safety Council, the construction industry has a fatality and disabling injury rate that is approximately three times higher than the all-industry...
Twenty-one countersunk culverts in Oregon were inventoried to establish baseline information for the stream crossings so that subsequent resurveys can assess the long-term stability and functionality of the culvert design. A subset of the inventoried culverts was selected for detailed hydraulic measurements. The detailed velocity measurements were used to help...
Western forests have become increasingly fragmented landscapes dominated by young stands. Given that western Oregon forests largely consist of headwater systems, there is a need to better understand how headwater forest taxa and their habitats are impacted by forest management practices. Several amphibian species associated with forested headwater systems have...
Stream-dwelling species in the U.S. southern Appalachian Mountains region are particularly vulnerable to climate change and acidification. The objectives of this study were to quantify the spatial extent of contemporary suitable habitat for acid- and thermally sensitive aquatic species and to forecast future habitat loss resulting from expected temperature increases...
The effect of salmon blood plasma (SPP) on the gelation of Pacific whiting surimi under different ohmic heating conditions was investigated. SPP was found to significantly increase gel strength in gels heated ohmically to and held at 60° for 30 min followed by heating ohmically to 90°C. SPP at a...
The effect of salmon plasma (SP) from Chinook salmon on proteolytic inhibition was investigated. SP was found to inhibit both cysteine and serine proteases as well as protease extracted from Pacific whiting muscle. SP was found to contain a 55 kDa cysteine protease inhibitor through SDS-PAGE inhibitor staining. Freeze dried...
We examined terrestrial amphibians in managed headwater forest stands in western Oregon from 1998 to 2009. We assessed: (1) temporal and spatial patterns of species capture rates, and movement patterns with distance from streams and forest management treatments of alternative riparian buffer widths and upland thinning; (2) species survival and...
Ship tracks appearing in both the morning and afternoon Moderate Resolution Imaging Spectroradiometer (MODIS) imagery for the Pacific Ocean off the west coast of the United States were used to study the morning-to-afternoon evolution of marine stratus polluted by underlying ships and nearby uncontaminated stratus. Analyzed 925-hPa winds were used...
Spatial variation of available food resources can be difficult to accurately quantify for wide ranging organisms
at landscape scales. Lichens with usnic acid, a yellowish pigment, constitute a large portion of caribou winter
diet across much of their range. We take a new approach of modeling lichen abundances by capitalizing...
Concentrated solar power (CSP) plants have the potential to reduce the consumption of nonrenewable resources and greenhouse gas emissions in electricity production. In CSP systems, a field of heliostats focuses solar radiation on a central receiver, and energy is then transferred to a thermal power plant at high temperature. However,...
The use of timber harvest residue as an energy source is thought to have environmental benefits relative to food-based crops, yet the ecological impact of this practice remains largely unknown. We assessed whether the abundance and diversity of wild bees (Apoidea) were influenced by the removal of harvest residue and...
We previously reported that inhibition of the Na⁺ translocating NADH:ubiquinone oxidoreductase (NQR), either by chemical inhibition or mutation, increased toxT transcription in Vibrio cholerae. In this study, we revealed that the nqr mutant strain showed similar phenotypes as the Escherichia coli NADH dehydrogenase I (nuo) mutant strain (e.g. growth defect...
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Mode of action Substrates
Sara R. Fassio1, Yusuke Minato2, Matthew J. Quinn1, Wyatt J. Faulkner1 and
We previously reported that inhibition of the Na⁺ translocating NADH:ubiquinone oxidoreductase (NQR), either by chemical inhibition or mutation, increased toxT transcription in Vibrio cholerae. In this study, we revealed that the nqr mutant strain showed similar phenotypes as the Escherichia coli NADH dehydrogenase I (nuo) mutant strain (e.g. growth defect...
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% Urea
Mode of action
Substrates
Sara R. Fassio1, Yusuke Minato2, Matthew J. Quinn1, Wyatt J. Faulkner1
This research examines the effect of recent landownership changes and new management stewardship
mechanisms (e.g., forest certification and working forest conservation easements) on disturbance rates in Maine
forests. We quantify forest disturbance rates between 2000 and 2007 and forest cover type composition in 2007,
as detected by Landsat Thematic Mapper...
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This research examines the effect of recent landownership changes and new management stewardship
mechanisms (e.g., forest certification and working forest conservation easements) on disturbance rates in Maine
forests. We quantify forest disturbance rates between 2000 and 2007 and forest cover type composition in 2007,
as detected by Landsat Thematic Mapper...
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ecological applications of remote sensing.
Bioscience 54(6):535-545.
Cohen, W.B., T.A. Spies, R. Alig
Circadian clocks coordinate physiological, neurological, and behavioral functions into circa 24 hour rhythms, and the
molecular mechanisms underlying circadian clock oscillations are conserved from Drosophila to humans. Clock oscillations
and clock-controlled rhythms are known to dampen during aging; additionally, genetic or environmental clock disruption
leads to accelerated aging and increased...
Circadian clocks coordinate physiological, neurological, and behavioral functions into circa 24 hour rhythms, and the
molecular mechanisms underlying circadian clock oscillations are conserved from Drosophila to humans. Clock oscillations
and clock-controlled rhythms are known to dampen during aging; additionally, genetic or environmental clock disruption
leads to accelerated aging and increased...
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between the Circadian System and
Alzheimer’s Disease-Like Symptoms in Drosophila
Dani M. Long1., MatthewR
We present 36 new ⁴⁰Ar-³⁹Ar incremental heating age determinations from the Caribbean Large
Igneous Province (CLIP) providing evidence for extended periods of volcanic activity and suggest a new
tectonomagmatic model for the province’s timing and construction. These new ⁴⁰Ar-³⁹Ar ages for the
Curaçao Lava Formation (CLF) and Haiti’s Dumisseau Formation...
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insights from
Curaçao and Haiti
Matthew W. Loewen, Robert A. Duncan, Adam J. R. Kent, and Kyle Krawl
We present 36 new ⁴⁰Ar-³⁹Ar incremental heating age determinations from the Caribbean Large
Igneous Province (CLIP) providing evidence for extended periods of volcanic activity and suggest a new
tectonomagmatic model for the province’s timing and construction. These new ⁴⁰Ar-³⁹Ar ages for the
Curaçao Lava Formation (CLF) and Haiti’s Dumisseau Formation...
Graphene is a promising material for applications in aqueous electrolyte environments. To explore the impact of such environments on graphene's electrical properties, we performed Hall bar measurements on electrolyte-gated graphene. Assuming a Drude model, we find that the room temperature carrier mobility in water-gated, SiO₂-supported graphene reaches 7000 cm²/Vs, comparable to...
Concentrations of H₂O and CO₂ in olivine-hosted melt inclusions can be used to estimate crystallization depths for the olivine host. However, the original dissolved CO₂ concentration of melt inclusions at the time of trapping can be difficult to measure directly because in many cases substantial CO₂ is transferred to shrinkage...
Ontogenetic changes in resource use often delimit transitions between life stages. Ecological and individual factors can cause variation in the timing and consistency of these transitions, ultimately affecting community and population dynamics through changes in growth and survival. Therefore, it is important to document and understand behavioral and life history...
Six species of Cystangium, a genus of
sequestrate taxa related to Russula, were collected
in Patagonia (Argentina and Chile) during autumn
2001. Two species, C. depauperatum Singer & A.H.
Sm. and C. nothofagi (E. Horak) Trappe, Castellano &
T. Lebel, were already known from this region, while
four new species,...
Liriomyza huidobrensis (Blanchard) is a highly destructive invasive leafminer pest
currently causing extensive damage to vegetable and horticultural crops around the world. Liriomyza
langei Frick is a leafminer pest native to California that cannot currently be morphologically distinguished
from L. huidobrensis. We used a DNA-barcoding approach, a published PCR-RFLP method,...
We conducted 11 independent short-term carbon dioxide (CO₂) manipulation experiments using colonies of
the filamentous cyanobacteria Trichodesmium isolated on three cruises in the North Pacific Subtropical Gyre
(NPSG). Dinitrogen (N₂) and carbon (C) fixation rates of these colonies were compared over CO₂ conditions
ranging from ~ 18 Pa (equivalent to...
We present 36 new ⁴⁰Ar-³⁹Ar incremental heating age determinations from the Caribbean Large
Igneous Province (CLIP) providing evidence for extended periods of volcanic activity and suggest a new
tectonomagmatic model for the province’s timing and construction. These new ⁴⁰Ar-³⁹Ar ages for the
Curaçao Lava Formation (CLF) and Haiti’s Dumisseau Formation...
Lower order, non-fish-bearing streams, often termed ‘‘headwater streams’’, have received minimal
research effort and protection priority, especially in mesic forests where distinction between riparian
and upland vegetation can be subtle. Though it is generally thought that breeding bird abundance is
higher in riparian zones, little is known about species distributions...