Index Catalog // ScholarsArchive@OSU

Impact of diurnal temperature variation on grape berry development, proanthocyanidin accumulation, and the expression of flavonoid pathway genes

Creator:: Cohen, Seth D., Tarara, Julie M., Gambetta, Greg A., Matthews, Mark A., and Kennedy, James A.
Abstract:: Little is known about the impact of temperature on proanthocyanidin (PA) accumulation in grape skins, despite its significance in berry composition and wine quality. Field-grown grapes (cv. Merlot) were cooled during the day or heated at night by +/–8 C, from fruit set to veraison in three seasons, to determine...
Resource Type:: Article
Full Text:: , pp. 2655–2665, 2012 doi:10.1093/jxb/err449 Advance Access publication 20 January, 2012 This paper is

ASRP: the Arabidopsis Small RNA Project Database

Creator:: Gustafson, Adam M., Allen, Edwards, Givan, Scott, Smith, Daniel, Carrington, James C., and Kasschau, Kristin D.
Abstract:: ABSTRACT Eukaryotes produce functionally diverse classes of small RNAs (20–25 nt). These include microRNAs (miRNAs), which act as regulatory factors during growth and development, and short-interfering RNAs (siRNAs), which function in several epigenetic and post-transcriptional silencing systems. The Arabidopsis Small RNA Project (ASRP) seeks to characterize and functionally analyze the...
Resource Type:: Article
Full Text:: , Database issue D637–D640 doi:10.1093/nar/gki127 composed of web pages delivered by an apache HTTP

SEK: sparsity exploiting k-mer-based estimation of bacterial community composition

Creator:: Chatterjee, Saikat, Koslicki, David, Dong, Siyuan, Innocenti, Nicholas, Cheng, Lu, Lan, Yueheng, Vehkaperä, Mikko, Skoglund, Mikael, Rasmussen, Lars, K., Aurell, Erik, and Corander, Jukka
Abstract:: MOTIVATION: Estimation of bacterial community composition from a high-throughput sequenced sample is an important task in metagenomics applications. Since the sample sequence data typically harbors reads of variable lengths and different levels of biological and technical noise, accurate statistical analysis of such data is challenging. Currently popular estimation methods are...
Resource Type:: Article
Full Text:: . Bioinformatics, 30(17), 2423-2431. doi:10.1093/bioinformatics/btu320 10.1093/bioinformatics/btu320 Oxford

GouthuSatyanarayanaHorticultureComparativeStudyRipening.pdf

Creator:: Gouthu, Satyanarayana, O'Neil, Shawn T., Di, Yanming, Ansarolia, Mitra, Megraw, Molly, and Deluc, Laurent G.
Abstract:: Transcriptional studies in relation to fruit ripening generally aim to identify the transcriptional states associated with physiological ripening stages and the transcriptional changes between stages within the ripening programme. In non-climacteric fruits such as grape, all ripening-related genes involved in this programme have not been identified, mainly due to the...
Full Text:: :10.1093/jxb/eru329 10.1093/jxb/eru329 Oxford University Press Version of Record http

Social segregation of humpback whales in contrasted coastal and oceanic breeding habitats

Creator:: Derville, Solène, Garrigue, Claire, and Torres, Leigh G.
Abstract:: Article available for download at publisher's website: https://doi.org/10.1093/jmammal/gyx185
Resource Type:: Article

Gene-silencing antisense oligomers inhibit Acinetobacter growth in vitro and in vivo

Creator:: Geller, Bruce L., Marshall-Batty, Kimberly, Schnell, Frederick J., McKnight, Mattie M., Iversen, Patrick L., and Greenberg, David E.
Abstract:: Background: Peptide-conjugated phosphorodiamidate morpholino oligomers (PPMOs) are synthetic DNA/RNA analogs that silence expression of specific genes. We studied whether PPMOs targeted to essential genes in Acinetobacter lwoffii and A. baumannii are active in vitro and in vivo. Methods: PPMOs were evaluated in vitro using MIC and viability assays, and in...
Resource Type:: Article

Krill biomass and aggregation structure in relation to tidal cycle in a penguin foraging region off the Western Antarctic Peninsula

Creator:: Bernard, Kim S. and Steinberg, Deborah K.
Abstract:: Antarctic krill are a key component of the diet of Adélie penguins inhabiting the Western Antarctic Peninsula (WAP), yet our understanding of the variability of krill distribution patterns within nearshore penguin feeding grounds is limited. A recent study of the foraging patterns of penguins breeding in the northern WAP suggests...
Resource Type:: Article

From tolerant to sensitive: how a small peptide produced by potato plants determines the fate of potato-PVY interaction

Creator:: Goyer A
Resource Type:: Other
Full Text:: /jxb/advance-article-abstract/doi/10.1093/jxb/erab078/6157931 and was funded by grants from the

Variants of Asthma and Chronic Obstructive Pulmonary Disease Genes and Lung Function Decline in Aging

Creator:: Poon, Audrey H., Houseman, E. Andres, Ryan, Louise, Sparrow, David, Vokonas, Pantel S., and Litonjua, Augusto A.
Abstract:: BACKGROUND: A substantial proportion of the general population has low lung function, and lung function is known to decrease as we age. Low lung function is a feature of several pulmonary disorders, such as uncontrolled asthma and chronic obstructive pulmonary disease (COPD). The objective of this study is to investigate...
Resource Type:: Article
Full Text:: Medical Sciences, 69(7), 907-913. doi:10.1093/gerona/glt179 10.1093/gerona/glt179 Oxford University

Advanced Morphological — Behavioral Test Platform Reveals Neurodevelopmental Defects in Embryonic Zebrafish Exposed to Comprehensive Suite of Halogenated and Organophosphate Flame Retardants

Creator:: Noyes, Pamela D., Haggard, Derik E., Gonnerman, Greg D., and Tanguay, Robert L.
Abstract:: Sharp increases in the use of flammable plastics and electronic devices coupled with stricter fire safety requirements have promoted the heavy use of flame retardant chemicals. While flame retardant use has increased, a great deal of uncertainty surrounds their safety with some evidence showing toxicity and risk to human and...
Resource Type:: Article

ScholarsArchive@OSU

Impact of diurnal temperature variation on grape berry development, proanthocyanidin accumulation, and the expression of flavonoid pathway genes

ASRP: the Arabidopsis Small RNA Project Database

SEK: sparsity exploiting k-mer-based estimation of bacterial community composition

GouthuSatyanarayanaHorticultureComparativeStudyRipening.pdf

Social segregation of humpback whales in contrasted coastal and oceanic breeding habitats

Gene-silencing antisense oligomers inhibit Acinetobacter growth in vitro and in vivo

Krill biomass and aggregation structure in relation to tidal cycle in a penguin foraging region off the Western Antarctic Peninsula

From tolerant to sensitive: how a small peptide produced by potato plants determines the fate of potato-PVY interaction

Variants of Asthma and Chronic Obstructive Pulmonary Disease Genes and Lung Function Decline in Aging

Advanced Morphological — Behavioral Test Platform Reveals Neurodevelopmental Defects in Embryonic Zebrafish Exposed to Comprehensive Suite of Halogenated and Organophosphate Flame Retardants

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