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  • CaiC239SMutationBetaTubulin.pdf

    Creator:
    Cai, Meng, Miao, Jianqiang, Song, Xi, Lin, Dong, Bi, Yang, Chen, Lei, Liu, Xili, and Tyler, Brett M.
    Abstract:
    Zoxamide is the sole β-tubulin inhibitor registered for the control of oomycete pathogens. The current study investigated the activity of zoxamide against Phytophthora sojae and baseline sensitivity was established with a mean EC₅₀ of 0.048 μg/ml. The data is critical for monitoring changes in zoxamide-sensitivity in the field. Three stable...
    Full Text:
    : 20 May 2016 doi: 10.3389/fmicb.2016.00762 Edited by: Vijai Kumar Gupta, National University of

  • defense.pptx

    Creator:
    Carleson, Nick
    Abstract:
    Root-knot nematodes (Meloidogyne spp.) are one of the most important global plant pathogens. Recent innovations in molecular techniques have allowed increased study of this important pest, including the ability to investigate associated microbiomes. This study used 16S rDNA metagenomic sequencing to characterize the microbiome of Meloidogyne hapla, the northern root-knot...
    Full Text:
    microbiome: looking back and future perspectives. Frontiers in Microbiology, 5. https://doi.org/10.3389/fmicb

  • GiovannoniStephenMicrobiologyMeta-omicSignaturesMicrobial.pdf

    Creator:
    Glass, Jennifer B., Kretz, Cecilia B., Ganesh, Sangita, Giovannoni, Stephen J., Vergin, Kevin L., and et al.
    Abstract:
    Iron (Fe) and copper (Cu) are essential cofactors for microbial metalloenzymes, but little is known about the metalloenyzme inventory of anaerobic marine microbial communities despite their importance to the nitrogen cycle. We compared dissolved O₂ , NO₃⁻, NO₂⁻, Fe and Cu concentrations with nucleic acid sequences encoding Fe and Cu-binding...
    Full Text:
    marine oxygen minimum zones. Frontiers in Microbiology, 6, 998. doi:10.3389/fmicb.2015.00998 10.3389

  • CrumpByronCEOASMetacommunityDynamicsBacteria.pdf

    Creator:
    Adams, Heather E., Crump, Byron C., and Kling, George W.
    Abstract:
    To understand mechanisms linking ecosystem processes and microbial diversity in freshwater ecosystems, bacterial productivity and the metacommunity dynamics of species sorting and mass effects were investigated in an 18 ha headwater lake in northern Alaska. On most sampling dates, the phylogenetic composition of bacterial communities in inflowing streams (inlets) was...
    Full Text:
    biogeography. Frontiers in Microbiology, 5:82. doi:10.3389/fmicb.2014.00082 10.3389/fmicb.2014.00082

  • Hosen JacobCEOASMicrobialResponsesChanges.pdf

    Creator:
    Febria, Catherine M., Hosen, Jacob D., Crump, Byron C., and et al.
    Abstract:
    Microbial communities are responsible for the bulk of biogeochemical processing in temporary headwater streams, yet there is still relatively little known about how community structure and function respond to periodic drying. Moreover, the ability to sample temporary habitats can be a logistical challenge due to the limited capability to measure...
    Full Text:
    headwater streams: a cross-system comparison. Frontiers in Microbiology, 6, 522. doi:10.3389/fmicb

  • ThurberRebeccaMicrobiologyTwoDistinctMicrobial.pdf

    Creator:
    Cuvelier, Marie L., Blake, Emily, Mulheron, Rebecca, McCarthy, Peter J., Blackwelder, Patricia, Thurber, Rebecca L. Vega, and Lopez, Jose V.
    Abstract:
    Marine sponges are vital components of benthic and coral reef ecosystems, providing shelter and nutrition for many organisms. In addition, sponges act as an essential carbon and nutrient link between the pelagic and benthic environment by filtering large quantities of seawater. Many sponge species harbor a diverse microbial community (including...
    Full Text:
    Microbiology, 5, 581. doi:10.3389/fmicb.2014.00581 10.3389/fmicb.2014.00581 Frontiers Research Foundation

  • TylerBrettGRBGeneticResourcesMethane.pdf

    Creator:
    Purwantini, Endang, Torto-Alalibo, Trudy, Lomax, Jane, Setubal, João C., Tyler, Brett M., and Mukhopadhyay, Biswarup
    Abstract:
    Methane (CH₄) is a valuable fuel, constituting 70–95% of natural gas, and a potent greenhouse gas. Release of CH₄ into the atmosphere contributes to climate change. Biological CH₄ production or methanogenesis is mostly performed by methanogens, a group of strictly anaerobic archaea. The direct substrates for methanogenesis are H₂ plus...
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    Ontology. Frontiers in Microbiology, 5, 634. doi:10.3389/fmicb.2014.00634 10.3389/fmicb.2014.00634

  • Genomic mapping of efflux pumps in Listeria monocytogenes and their contribution to cadmium and fluoroquinolone tolerance

    Creator:
    Domen, Andrea
    Abstract:
    Listeria monocytogenes is the third most deadly foodborne pathogen in the United States. The young and elderly, as well as pregnant and immunocompromised people are the population most susceptible to serious illness and death from listeriosis infections. Unlike most foodborne pathogens, L. monocytogenes does not live a solely enteric lifestyle....
    Resource Type:
    Masters Thesis

  • thesis.pdf

    Creator:
    Carleson, Nick
    Abstract:
    Root-knot nematodes (Meloidogyne spp.) are one of the most important global plant pathogens. Recent innovations in molecular techniques have allowed increased study of this important pest, including the ability to investigate associated microbiomes. This study used 16S rDNA metagenomic sequencing to characterize the microbiome of Meloidogyne hapla, the northern root-knot...

  • YanRareCodonAGA.pdf

    Creator:
    Yan, Qing, Philmus, Benjamin, Hesse, Cedar, Kohen, Max, Chang, Jeff H., and Loper, Joyce E.
    Abstract:
    The soil bacterium Pseudomonas protegens Pf-5 can colonize root and seed surfaces of many plants, protecting them from infection by plant pathogenic fungi and oomycetes. The capacity to suppress disease is attributed to Pf-5's production of a large spectrum of antibiotics, which is controlled by complex regulatory circuits operating at...
    Full Text:
    : 10.3389/fmicb.2016.00497 Frontiers in Microbiology | www.frontiersin.org 1 April 2016 | Volume 7