The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Forest harvest practices can impact nutrient concentrations and stream temperatures, altering aquatic ecosystems. To better inform future sustainable forest resource management practices, quantifying the impact of current practices on water quality, particularly in headwater streams is important. In this study, I quantified monthly nitrate-nitrite (N) and orthophosphate (P) concentrations, 7-day...
Mountainous headwater streams make up ~80 % of stream length globally and are strongly connected with catchment hillslopes and riparian areas, which can influence water quantity, quality, and availability for downstream uses. Accordingly, effective management of headwater streams and riparian zones to maintain desired ecosystem services downstream is critical, particularly...
In a radiological emergency scenario, the capability to rapidly visualize radiation emitted from debris, contamination, or absorbed in biological samples, while visualizing the non-radioactive (or “conventional” image) features within a field of view, will provide critical information to support optimization of further analysis, sample collection, and decision making. This research...
Collective robotic systems are biologically-inspired and exhibit behaviors found in spatial swarms (e.g., fish), colonies (e.g., ants), or a combination of both (e.g., bees). Collective robotic system popularity continues to increase due to their apparent global intelligence and emergent behaviors. Many applications can benefit from the incorporation of collectives, including...
My mother named me after Hollywood icon Katharine Hepburn, but what made a working-class girl grow to love this posh celebrity so much? The obvious answer is that my mother aspired to be posh herself; but lack of money or sophistication were not the only things impacting her potential— there...
Diversity literary awards and other sources were used to create a list of high-quality titles written by and about underrepresented groups. This list was used to assess the diversity and inclusiveness of the library collections of a land-grant university. Gaps in the collection and acquisition processes were identified and will...
The Harderian gland is a large cephalic gland present in most groups of terrestrial vertebrates. Although the Harderian gland has been the focus of numerous studies for more than 300 years, its physiological function has remained largely unresolved. Harderian gland secretions are diverse among different taxa, and many putative functions...
Magnetotellurics is used in two geologic settings on scales ranging from 1000-km tectonic structures to local features hundreds of meters wide. These areas are the Midcontinent Rift System (MRS) and its related mantle plume in the northern Midwestern United States and Newberry Volcano in central Oregon.
The MRS study uses...
This dissertation focuses on personal privacy in human-robot interaction, which we call "privacy-sensitive robotics." Our understanding of "privacy" is very broad, including not just information privacy but also physical, psychological, and social privacy. We begin by surveying the scholarly literature on privacy and talking about why it applies to interactions...