Index Catalog // ScholarsArchive@OSU

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

Creator:: Wiemann, Philipp, Sieber, Christian M. K., von Bargen, Katharina W., Studt, Lena, Niehaus, Eva- Maria, Espino, Jose J., Huß, Kathleen, Michielse, Caroline B., Albermann, Sabine, Wagner, Dominik, Bergner, Sonja V., Connolly, Lanelle R., Fischer, Andreas, Reuter, Gunter, Kleigrewe, Karin, Bald, Till, Wingfield, Brenda D., Ophir, Ron, Freeman, Stanley, Hippler, Michael, Smith, Kristina M., Brown, Daren W., Proctor, Robert H., Munsterkotter, Martin, Freitag, Michael, Humpf, Hans-Ulrich, Guldener, Ulrich, and Tudzynski, Bettina
Abstract:: The fungus Fusarium fujikuroi causes "bakanae" disease of rice due to its ability to produce gibberellins (GAs), but it is also known for producing harmful mycotoxins. However, the genetic capacity for the whole arsenal of natural compounds and their role in the fungus' interaction with rice remained unknown. Here, we...
Resource Type:: Article
Full Text:: . Smith5, Daren W. Brown10, Robert H. Proctor10, Martin Münsterkötter2, Michael Freitag5, Hans-Ulrich

An update to the Surface Ocean CO₂ Atlas (SOCAT version 2)

Creator:: Bakker, D. C. E., Pfeil, B., Smith, K., Hankin, S., Olsen, A., Alin, S. R., Cosca, C., Harasawa, S., Kozyr, A., Nojiri, Y., O'Brien, K. M., Schuster, U., Telszewski, M., Tilbrook, B., Wada, C., Akl, J., Barbero, L., Bates, N. R., Boutin, J., Bozec, Y., Cai, W.-J., Castle, R. D., Chavez, F. P., Chen, L., Chierici, M., Currie, K., de Baar, H. J. W., Evans, W., Feely, R. A., Fransson, A., Gao, Z., Hales, B., Hardman-Mountford, N. J., Hoppema, M., Huang, W.-J., Hunt, C. W., Huss, B., Ichikawa, T., Johannessen, T., Jones, E. M., Jones, S. D., Jutterström, S., Kitidis, V., Körtzinger, A., Landschützer, P., Lauvset, S. K., Lefèvre, N., Manke, A. B., Mathis, J. T., Merlivat, L., Metzl, N., Murata, A., Newberger, T., Omar, A. M., Ono, T., Park, G.-H., Paterson, K., Pierrot, D., Ríos, A. F., Sabine, C. L., Saito, S., Salisbury, J., Sarma, V. V. S. S., Schlitzer, R., Sieger, R., Skjelvan, I., Steinhoff, T., Sullivan, K. F., Sun, H., Sutton, A. J., Suzuki, T., Sweeney, C., Takahashi, T., Tjiputra, J., Tsurushima, N., van Heuven, S. M. A. C., Vandemark, D., Vlahos, P., Wallace, D. W. R., Wanninkhof, R., and Watson, A. J.
Abstract:: The Surface Ocean CO2 Atlas (SOCAT), an activity of the international marine carbon research community, provides access to synthesis and gridded fCO2 (fugacity of carbon dioxide) products for the surface oceans. Version 2 of SOCAT is an update of the previous release (version 1) with more data (increased from 6.3...
Resource Type:: Article
Full Text:: . Chierici23,24, K. Currie25, H. J. W. de Baar26, W. Evans4,27, R. A. Feely4, A. Fransson28, Z. Gao21, B. Hales29

Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes

Creator:: Schotanus, Klaas, Soyer, Jessica L., Connolly, Lanelle R., Grandaubert, Jonathan, Happel, Petra, Smith, Kristina M., Freitag, Michael, and Stukenbrock, Eva H.
Abstract:: Background: Supernumerary chromosomes have been found in many organisms. In fungi, these “accessory” or “dispensable” chromosomes are present at different frequencies in populations and are usually characterized by higher repetitive DNA content and lower gene density when compared to the core chromosomes. In the reference strain of the wheat pathogen,...
Resource Type:: Article
Full Text:: ., ... & Stukenbrock, E. H. (2015). Histone modifications rather than the novel regional centromeres of Zymoseptoria

Study on the damage mechanism of articular cartilage based on the fluid-solid coupled particle model

Creator:: Hong, Jun, Evans, T. Matthew, and Mente, Peter L.
Abstract:: Articular cartilage damage is the primary cause of osteoarthritis. Very little literature work focuses on the microstructural damage mechanism of articular cartilage. In this article, a new numerical method that characterizes fluid coupling in particle model is proposed to study the damage mechanism of articular cartilage. Numerical results show that...
Resource Type:: Article
Full Text:: Yasuda H. On impact penetration analysis and evaluation of brittle material plate using three

The effect of environmental chemicals on the tumor microenvironment

Creator:: Casey, Stephanie C., Vaccari, Monica, Al-Mulla, Fahd, Al-Temaimi, Rabeah, Amedei, Amedeo, Barcellos-Hoff, Mary Helen, Brown, Dustin G., Chapellier, Marion, Christopher, Joseph, Curran, Colleen S., Forte, Stefano, Hamid, Roslida A., Heneberg, Petr, Koch, Daniel C., Krishnakumar, P. K., Laconi, Ezio, Maguer-Satta, Veronique, Marongiu, Fabio, Memeo, Lorenzo, Mondello, Chiara, Raju, Jayadev, Roman, Jesse, Roy, Rabindra, Ryan, Elizabeth P., Ryeom, Sandra, Salem, Hosni K., Scovassi, A. Ivana, Singh, Neetu, Soucek, Laura, Vermeulen, Louis, Whitfield, Jonathan R., Woodrick, Jordan, Colacci, Annamaria, Bisson, William H., and Felsher, Dean W.
Abstract:: Potentially carcinogenic compounds may cause cancer through direct DNA damage or through indirect cellular or physiological effects. To study possible carcinogens, the fields of endocrinology, genetics, epigenetics, medicine, environmental health, toxicology, pharmacology and oncology must be considered. Disruptive chemicals may also contribute to multiple stages of tumor development through effects...
Resource Type:: Article
Full Text:: ., Barcellos-Hoff, M. H., ... & Felsher, D. W. (2015). The effect of environmental chemicals on the tumor

MyroldDavidCropSoilScienceEcologicalConsequencesExpansion.pdf

Creator:: Hiltbrunner, Erika, Aerts, Rien, Bühlmann, Tobias, Myrold, David D., and et al.
Abstract:: Research in warm-climate biomes has shown that invasion by symbiotic dinitrogen (N₂)-fixing plants can transform ecosystems in ways analogous to the transformations observed as a consequence of anthropogenic, atmospheric nitrogen (N) deposition: declines in biodiversity, soil acidification, and alterations to carbon and nutrient cycling, including increased N losses through nitrate...
Full Text:: biomes Hiltbrunner, E., Aerts, R., Bühlmann, T., Huss-Danell, K., Magnusson, B., Myrold, D. D

BurnsPatCEOASPredictingGlacioHydrolicChange.pdf

Creator:: Frans, Chris, Istanbulluoglu, Erkan, Lettenmaier, Dennis P., Naz, Bibi S., Clarke, Garry K. C., Condom, Thomas, Burns, Pat, and Nolin, Anne W.
Abstract:: In many partially glacierized watersheds glacier recession driven by a warming climate could lead to complex patterns of streamflow response over time, often marked with rapid increases followed by sharp declines, depending on initial glacier ice cover and rate of climate change. Capturing such “phases” of hydrologic response is critical...
Full Text:: runoff will decline thereafter [e.g., Huss et al., 2008; Lambrecht and Mayer, 2009; Moore et al., 2009

Isolation of a methanogen from deep marine sediments that contain methane hydrates, and description of Methanoculleus submarinus sp. nov.

Creator:: Mikucki, Jill A., Liu, Yitai, Delwiche, Mark, Colwell, Fredrick, and Boone, David R.
Abstract:: We isolated a methanogen from deep in the sediments of the Nankai Trough off the eastern coast of Japan. At the sampling site, the water was 950 m deep and the sediment core was collected at 247 m below the sediment surface. The isolated methanogen was named Nankai-1. Cells of...
Resource Type:: Article
Full Text:: . Huss, V. A. R., H. Festl, and K. H. Schleifer. 1983. Studies on the spectro- photometric determination

Incorporation of nitrogen from decomposing red alder leaves into plants and soil of a recent clearcut in Oregon

Creator:: Swanston, Christopher W. and Myrold, David Douglas
Abstract:: Nitrogen incorporation from red alder (Alnus rubra Bong.) into an Oregon upland mesic forest soil was studied by tracing the fate of 15N added as 15N-labeled alder leaf litter. The recovery of 15N in vegetation, litter, light- and heavy-fractions of the soil, the chloroform-labile (microbial biomass) pool, and the whole...
Resource Type:: Article
Full Text:: .56: 315–319. Huss-Danell, K., and Ohlsson, H. 1992. Distribution of biomass and nitrogen among plant

The Quality Perceptions of Rainbow Trout Defined by different Fish Market Sectors

Creator:: Setälä, Jari, Saarni, Kaija, and Honkanen, Asmo
Abstract:: In this study we apply Analytical Hierarchy Process (AHP) to examine the similarities and differences of the quality perceptions of different fish market sectors. In order to make this analyse, a hierarchic model of the total quality of fresh rainbow trout (Oncorhyncus mykiss) fillets was created. The model had seven...
Resource Type:: Research Paper
Full Text:: reared fish. In: Quality Assurance in the Fish Industry. Developments in Food Science 30. Huss, H

ScholarsArchive@OSU

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

An update to the Surface Ocean CO₂ Atlas (SOCAT version 2)

Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes

Study on the damage mechanism of articular cartilage based on the fluid-solid coupled particle model

The effect of environmental chemicals on the tumor microenvironment

MyroldDavidCropSoilScienceEcologicalConsequencesExpansion.pdf

BurnsPatCEOASPredictingGlacioHydrolicChange.pdf

Isolation of a methanogen from deep marine sediments that contain methane hydrates, and description of Methanoculleus submarinus sp. nov.

Incorporation of nitrogen from decomposing red alder leaves into plants and soil of a recent clearcut in Oregon

The Quality Perceptions of Rainbow Trout Defined by different Fish Market Sectors

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