Ammonia oxidation is the first and rate-limiting step in nitrification and is dominated by two distinct groups of microorganisms in soil: ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). AOA are often more abundant than AOB and dominate activity in acid soils. The mechanism of ammonia oxidation under acidic conditions has...
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, Germany). The molecular weight of DNA was
assessed by agarose gel electrophoresis, and the concentration
In this report, we present future projections of climate and climate-related natural hazards in Benton County for the 2020s (2010–2039) and 2050s (2040–2069) relative to the 1971–2000 historical baseline. The projections are based on multiple global climate models for both a lower greenhouse gas emissions scenario (RCP 4.5) and a...
Understanding how intra-specific differences in plant traits mediate vulnerability to herbivores of relevant habitat-forming plants is vital to attain a better knowledge on the drivers of the structure and functioning of ecosystems. Such studies, however, are rare in seagrass-mesograzer systems despite the increasingly recognized relevance of mesograzers as seagrass consumers....
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metabolites play a dominant
role in the ecology and evolution of plant defence and that they are strongly
Comparative phylogeography offers a unique opportunity to understand the interplay between past environmental events and life-history traits on diversification of unrelated but co-distributed species. Here, we examined the effects of the quaternary climate fluctuations and palaeomarine currents and present-day marine currents on the extant patterns of genetic diversity in the...
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either side of the
Central American Isthmus. Ecology and Evolution, 5(16), 3486-3499.
doi:10.1002
Methane (CH₄) is a valuable fuel, constituting 70–95% of natural gas, and a potent
greenhouse gas. Release of CH₄ into the atmosphere contributes to climate change.
Biological CH₄ production or methanogenesis is mostly performed by methanogens, a
group of strictly anaerobic archaea. The direct substrates for methanogenesis are H₂
plus...
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Bioinformatics Institute (EMBL-EBI), European Molecular Biology Laboratory, Hinxton, UK
3 Department of
Here we document introns in two Symbiodinium clades that were most likely gained following divergence of this genus
from other peridinin-containing dinoflagellate lineages. Soluble peridinin-chlorophyll a-proteins (sPCP) occur in short and
long forms in different species. Duplication and fusion of short sPCP genes produced long sPCP genes. All short and...
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*, Peter D. Vize3
1US Environmental Protection Agency, Western Ecology Division, Corvallis, Oregon, United
To survive winter, many perennial plants become endodormant, a state of suspended growth maintained even in favorable growing environments. To understand vegetative bud endodormancy, we collected paradormant, endodormant, and ecodormant axillary buds from Populus trees growing under natural conditions. Of 44,441 Populus gene models analyzed using NimbleGen microarrays, we found...
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Functional Plant Ecology,
a section of the journal
Frontiers in Plant Science
Received: 17 September 2014
Marine sponges are vital components of benthic and coral reef ecosystems, providing
shelter and nutrition for many organisms. In addition, sponges act as an essential carbon
and nutrient link between the pelagic and benthic environment by filtering large quantities
of seawater. Many sponge species harbor a diverse microbial community (including...
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molecular phylogenies created from marker genes. For
example, using the 28S rRNA gene, cox1 gene and a
Members of Gram-positive Actinobacteria cause economically important diseases to plants. Within the Rhodococcus genus,
some members can cause growth deformities and persist as pathogens on a wide range of host plants. The current model
predicts that phytopathogenic isolates require a cluster of three loci present on a linear plasmid, with...
Feedback loops involving soil microorganisms can
regulate plant populations. Here, we hypothesize that microorganisms
are most likely to play a role in plant–soil feedback
loops when they possess an affinity for a particular plant and
the capacity to consistently affect the growth of that plant for
good or ill. We...