In this dissertation we study the electromagnetic properties of plasmonic metamaterials. We develop an analytical description to solve the fundamental problem of free-space scattering in planar plasmonic systems by utilizing anisotropic metamaterials. We show with exact numerical simulations that these manufactured materials do completely eliminate the scattering, and even in...
The authors analyze electromagnetic modes in multilayered nanocomposites and demonstrate that the response of a majority of realistic layered structures is strongly affected by the nonlocal effects originating from strong field oscillations across the system, and is not described by conventional effective-medium theories. They develop the analytical description of the...
The authors study perspectives of nanowire metamaterials for negative-refraction waveguides, high-performance polarizers, and polarization-sensitive biosensors. They demonstrate that the behavior of these composites is strongly influenced by the concentration, distribution, and geometry of the nanowires, derive an analytical description of electromagnetism in anisotropic nanowire-based metamaterials, and explore the limitations of...
FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
Full Text:
. Partipilo, Rajani Raja, Justin L. Elser and Pankaj Jaiswal
Department of Botany and Plant Pathology, Oregon
This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by the Genetics Society of America. The published article can be found at: https://doi.org/10.1534/g3.116.027045
FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
FragariaCyc is a strawberry-specific cellular metabolic network based on the annotated genome sequence of Fragaria vesca L. ssp. vesca, accession Hawaii 4. It was built on the Pathway-Tools platform using MetaCyc as the reference. The experimental evidences from published literature were used for supporting/editing existing entities and for the addition...
Background: Next-generation sequencing and 'omics' platforms are used extensively in plant biology research to unravel new genomes and study their interactions with abiotic and biotic agents in the growth environment. Despite the availability of a large and growing number of genomic data sets, there are only limited resources providing highly-curated...
We have developed VitisCyc, a grapevine-specific metabolic pathway database that allows
researchers to (i) search and browse the database for its various components such as
metabolic pathways, reactions, compounds, genes and proteins, (ii) compare grapevine
metabolic networks with other publicly available plant metabolic networks, and (iii)
upload, visualize and analyze...