MOTIVATION: The automatic identification of over-represented motifs present in a collection of sequences continues to be a challenging problem in computational biology. Many existing approaches to motif identification do not always find the relevant biological motifs, or find only a subset of the occurrences of a motif. In this paper,...
The process of plant speciation often involves the evolution of divergent ecotypes in
response to differences in soil water availability between habitats. While the same set of traits
is frequently associated with xeric/mesic ecotype divergence, it is unknown whether those
traits evolve independently or if they evolve in tandem as...
The physician-patient relationship is one that relies heavily on the premise of trust. In contemporary medicine, trust is difficult to sustain due to the distractions created by technological documentation, rules, an increasing number of patients seen by a fewer physicians that diminish the human interaction within the relationship. To emphasize...
Blue spruce (Picea pungens) and Engelmann spruce (Picea engelmannii) experience varying levels of spruce beetle (Dendroctonus rufipennis (Kirby)) colonization, yet the underlying differences and mechanisms resulting in lower colonization for blue spruce are not known. Both spruce species have important roles in subalpine ecosystems where examining changes in mortality, distribution,...
An overarching explanation for environmental degradation has been humans' disconnection from the natural world. Utilizing Whiteheadian theory, I offer that there is no disconnection. Rather, I propose that there is a dearth of relational acknowledgement. I suggest that the Cartesian dualism and modern science led to an illusory belief that...
Time-dependent electronic transport is increasingly important to the state-of-the-art device design and fabrication. The development of nanoscale sensing, the harnessing and control of structural fluctuations, and the advancement of next-generation materials all require a treatment of quantum dynamics beyond the level of traditional methods and a more nuanced approach to...
In 2011 an individual fishing quota (IFQ) system was implemented for the limited entry trawl component of the Pacific groundfish fishery in the US. The IFQ system allocates quota shares (QS) for 29 IFQ stocks and individual bycatch quota (IBQ) shares for Pacific halibut. Each year quota shareholders are issued...
Although widely accepted, management systems that directly restrict catch or effort are neither efficient nor desirable for many fisheries, and have failed to conserve fishery stocks in many cases. Fisheries scientists have suggested that closing part of the fishery with marine reserves may sustain or increase harvest. These marine reserves...
Potato ground cover and spectral data were measured
in the Columbia Basin during the 1990 growing season.
Three spectral were correlated with ground cover;
normalized difference, near infrared-red ratio, and the
first derivative of the spectral curve at 750 nm. All
models were statistically significant at the 99% level.
Normalized...
A procedure for model-assisted climate impact assessment is
developed. The approach combines data from observations and
atmospheric general circulation models (GCNs), and provides the basis
for a potentially valuable means of using information derived from
GCMs for climate impact assessments on local scales.
The first component of this procedure is...