Index Catalog // ScholarsArchive@OSU

Factors affecting the inoculum potential of VA and ectomycorrhizal fungi in forest soils of southwest Oregon and northern California

Creator:: Parke, Jennifer Lee
Resource Type:: Dissertation
Full Text:: Jennifer Lee Parke for the degree of Doctor of Philosophy in Botany and Plant Pathology presented on July

A biosystematic study in the genus Aster, section Aster, in western North America

Creator:: Dean, Milton Lee
Abstract:: A biosystematic investigation was undertaken in 15 species and three subspecies of the genus Aster, in western North America. Previous studies had been based entirely on external morphological features, and it was believed that much could be learned about the natural affinities of the taxa by exploring their cytological and...
Resource Type:: Dissertation
Full Text:: AN ABSTRACT OF THE THESIS OF Milton Lee Dean for the Ph. D

The Generation Challenge Programme Platform: Semantic Standards and Workbench for Crop Science

Creator:: Bruskiewich, Richard, Senger, Martin, Davenport, Guy, Ruiz, Manuel, Rouard, Mathieu, Hazekamp, Tom, Takeya, Masaru, Doi, Koji, Satoh, Kouji, Costa, Marcos, Simon, Reinhard, Balaji, Jayashree, Akintunde, Akinnola, Mauleon, Ramil, Wanchana, Samart, Shah, Trushar, Anacleto, Mylah, Portugal, Arllet, Ulat, Victor Jun, Thongjuea, Supat, Braak, Kyle, Ritter, Sebastian, Dereeper, Alexis, Skofic, Milko, Rojas, Edwin, Martins, Natalia, Pappas, Georgios, Alamban, Ryan, Almodiel, Roque, Barboza, Lord Hendrix, Detras, Jeffrey, Manansala, Kevin, Mendoza, Michael Jonathan, Morales, Jeffrey, Peralta, Barry, Valerio, Rowena, Zhang, Yi, Gregorio, Sergio, Hermocilla, Joseph, Echavez, Michael, Yap, Jan Michael, Farmer, Andrew, Schiltz, Gary, Lee, Jennifer, Casstevens, Terry, Jaiswal, Pankaj, Meintjes, Ayton, Wilkinson, Mark, Good, Benjamin, Wagner, James, Morris, Jane, Marshall, David, Collins, Anthony, Kikuchi, Shoshi, Metz, Thomas, McLaren, Graham, and van Hintum, Theo
Abstract:: The Generation Challenge programme (GCP) is a global crop research consortium directed toward crop improvement through the application of comparative biology and genetic resources characterization to plant breeding. A key consortium research activity is the development of a GCP crop bioinformatics platform to support GCP research. This platform includes the...
Resource Type:: Article
Full Text:: Jennifer Lee,14 Terry Casstevens,15 Pankaj Jaiswal,15 Ayton Meintjes,16 Mark Wilkinson,17 Benjamin Good

Distinct Argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline

Creator:: Gu, Weifeng, Shirayama, Masaki, Conte Jr., Darryl, Vasale, Jessica, Batista, Pedro J., Claycomb, Julie M., Moresco, James J., Youngman, Elaine, Keys, Jennifer, Stoltz, Matthew J., Chen, Chun-Cheih G., Chaves, Daniel A., Duan, Shenghua E., Kasschau, Krisitin D., Fahlgren, Noah, Yates III, John R., Mitani, Shohei, Carrington, James C., and Mello, Craig C.
Abstract:: Endogenous small RNAs (endo-siRNAs) interact with Argonaute (AGO) proteins to mediate sequence-specific regulation of diverse biological processes. Here, we combine deep-sequencing and genetic approaches to explore the biogenesis and function of endo-siRNAs in C. elegans. We describe conditional alleles of the dicer-related helicase, drh-3, that abrogate both RNA interference and...
Resource Type:: Article
Full Text:: with 5′ monophosphate residues (Colmenares et al., 2007; Lee and Collins, 2007). In nematodes, RdRPs

Silviculture Impacts and Population Genomics of Coniferiporia sulphurascens, the Causal Agent of Laminated Root Rot

Creator:: McMurtrey, Shawn
Abstract:: Within the Pacific Northwest, USA, root diseases of conifers are a major forest health concern. These diseases are primarily caused by basidiomycete fungi. These fungal associates play a vital role in carbon sequestration but also have a significant negative economic impact within the timber industry. As a result, research on...
Resource Type:: Masters Thesis
Full Text:: Collins, CO: U.S. Department of Agriculture, Forest Service, Forest Health Technology Enterprise Team

Genomics-enabled exploration of insect toxicity in the Pseudomonas fluorescens group

Creator:: Rangel, Lorena I.
Abstract:: Pseudomonas is a diverse genus of Gamma proteobacteria that are ubiquitous in the natural environment, including soil, water, plant surfaces, and animals. The Pseudomonas fluorescens group is a diverse collection of seven subgroups and more than 50 named species. This group is known for their production of a variety of...
Resource Type:: Masters Thesis

Genetic Structure in Populations of the Douglas-fir Swiss Needle Cast Fungus Nothophaeocryptopus gaeumannii

Creator:: Bennett, Patrick I.
Abstract:: The fungus Nothophaeocryptopus gaeumannii is the causative agent of Swiss needle cast (SNC), a foliar disease of Douglas-fir. Disease is characterized by premature loss of foliage and reduced growth resulting from the inhibition of photosynthesis due to the occlusion of stomata by the ascocarps of N. gaeumannii. Although the disease...
Resource Type:: Dissertation

Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley

Creator:: Graebner, Ryan C., Wise, Mitchell, Cuesta-Marcos, Alfonso, Geniza, Matthew, Blake, Tom, Blake, Victoria C., Butler, Joshua, Chao, Shiaoman, Hole, David J., Horsley, Rich, Jaiswal, Pankaj, Obert, Don, Smith, Kevin P., Ullrich, Steven, and Hayes, Patrick M.
Abstract:: The Genome-Wide Association Studies approach was used to detect Quantitative Trait Loci associated with tocochromanol concentrations using a panel of 1,466 barley accessions. All major tocochromanol types- α-, β-, δ-, γ-tocopherol and tocotrienol- were assayed. We found 13 single nucleotide polymorphisms associated with the concentration of one or more of...
Resource Type:: Article
Full Text:: ., Fort Collins, Colorado, United States of America, 7 USDA-ARS Cereal Crops Research Unit, Fargo, North

Sequence verification of synthetic DNA by assembly of sequencing reads

Creator:: Wilson, Mandy L., Cai, Yizhi, Hanlon, Regina, Taylor, Samantha, Chevreux, Bastien, Setubal, João C., Tyler, Brett M., and Peccoud, Jean
Abstract:: Gene synthesis attempts to assemble user-defined DNA sequences with base-level precision. Verifying the sequences of construction intermediates and the final product of a gene synthesis project is a critical part of the workflow, yet one that has received the least attention. Sequence validation is equally important for other kinds of...
Resource Type:: Article
Full Text:: source biological part registry platform and tools. Nucleic Acids Res, 40, e141. 12. Lee,P.A., Dymond

The Plant Actin Cytoskeleton Responds to Signals from Microbe-Associated Molecular Patterns

Creator:: Henty-Ridilla, Jessica L., Shimono, Masaki, Li, Jiejie, Chang, Jeff H., Day, Brad, and Staiger, Christopher J.
Abstract:: Plants are constantly exposed to a large and diverse array of microbes; however, most plants are immune to the majority of potential invaders and susceptible to only a small subset of pathogens. The cytoskeleton comprises a dynamic intracellular framework that responds rapidly to biotic stresses and supports numerous fundamental cellular...
Resource Type:: Article

ScholarsArchive@OSU

Factors affecting the inoculum potential of VA and ectomycorrhizal fungi in forest soils of southwest Oregon and northern California

A biosystematic study in the genus Aster, section Aster, in western North America

The Generation Challenge Programme Platform: Semantic Standards and Workbench for Crop Science

Distinct Argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline

Silviculture Impacts and Population Genomics of Coniferiporia sulphurascens, the Causal Agent of Laminated Root Rot

Genomics-enabled exploration of insect toxicity in the Pseudomonas fluorescens group

Genetic Structure in Populations of the Douglas-fir Swiss Needle Cast Fungus Nothophaeocryptopus gaeumannii

Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley

Sequence verification of synthetic DNA by assembly of sequencing reads

The Plant Actin Cytoskeleton Responds to Signals from Microbe-Associated Molecular Patterns

Limit your search

Academic Affiliation

Advisor

Commencement Year

Committee Member

Creator

Contributor

Date

Decade

Degree Field

Degree Level

Degree Name

Language

License

Non-Academic Affiliation

Peer Reviewed

Resource Type

Rights Statement

Subject

Search Constraints

Search Results

Limit your search