This dataset contains DNA sequence data of Oncorhynchus species, isolated from environmental DNA (eDNA) from Pacific Northwest streams via microfluidic eDNA metabarcoding and high-throughput (Ilummina) sequencing (samples collected from 2017-09-22 to 2017-10-10). It is accompanied by scripts and commands for data analyses including: sequence denoising, calculation of entropy values by...
Prairie-oak ecosystems in the Willamette Valley, Oregon have experienced habitat loss and degradation; most of these ecosystems are fragmented into smaller patches. Prairie-oak butterfly species, in the Willamette Valley, have decreased dramatically due to loss or degradation of habitat. More research is needed on sustaining the populations of butterflies in...
I measured responses of free-ranging Rocky Mountain elk (Cervus elaphus) to recreational disturbance at Starkey Experimental Forest and Range, Oregon from April to October, 2003 and 2004. Resting, feeding, and travel activities of 13 cow elk were recorded at 5-minute intervals using Actiwatch™ motion sensors. Elk were subjected to four...
Understanding how wetland birds use habitat is pivotal to developing successful and
beneficial conservation strategies. Although it has been an ardent topic in forest
research for some time, how species interact with the spatial patterning of habitat
across a landscape (i.e., landscape structure) has been more or less neglected in...
Juvenile coho salmon (Oncorhynchus kisutch) and steelhead trout
(Salmo gairdneri) of different stocks and three transferrin genotypes
(AA, AC, and CC), all reared in identical or similar environments, were
experimentally infected with the causative agent of bacterial kidney
disease (BKD) or Vibrio anguillarum. Mortality due to the pathogens
was compared...
Northern Spotted Owls (Strix occidentalis caurina) are a long-lived forest owl and range-wide declines in their numbers have resulted in the species being listed as threatened under the endangered species act. While many studies have been focused on population trends and reproductive performance of Spotted Owls from different age-classes, none...
Once hunted to the brink of extinction, humpback whales (Megaptera novaeangliae) in the North Atlantic have recently been increasing in numbers. However, uncertain information on past abundance makes it difficult to assess the extent of the recovery in this species. While estimates of pre-exploitation abundance based upon catch data suggest...
The 1989 Exxon Valdez oil spill (EVOS) in Prince William Sound, Alaska provided impetus for a great deal of research into the ecosystems of the Northern Gulf of Alaska. Buried within the multitude of resulting impacts, which included hundreds of thousands of oiled seabirds and dramatic ecosystem shifts in the...
An exploratory study of 48-hour Pacific oyster embryo
bioassays employing spent sulfite liquor (SSL) in test
concentrations ranging from 10 to 45 ppm was made at two
incubation temperatures, 20° and 24° C. Fourteen separate
bioassays, each employing embryos originating from three to
four different parentages, were conducted at the...
Mercury (Hg) is a bioaccumulative metal that can threaten the health of wild birds. Feathers are commonly used biomonitoring tools for non-lethally estimating Hg exposure in birds because they contain stable Hg concentrations upon completion of feather growth, when blood flow to the feather has stopped. Despite the common use...