Questions: Are traits related to the performance of plant species in restoration? Are the relationships between traits and performance consistent across the functional groups of annual forbs, perennial forbs, and grasses? Do the relationships between traits and performance depend on neighboring functional groups? Location: A former agricultural field, being restored...
Turbulent mixing of salt is examined in a shallow salt wedge estuary with strong fluvial and tidal forcing. A numerical model of the Merrimack River estuary is used to quantify turbulent stress, shear production, and buoyancy flux. Little mixing occurs during flood tides despite strong velocities because bottom boundary layer...
As global climate changes over the next century, forest productivity is expected to change as well. Using PRISM climate and productivity data measured on a grid of 3356 plots, we developed a simultaneous autoregressive (SAR) model to estimate the impacts of climate change on potential productivity of Pacific Northwest (PNW)...
The concept of sustainable resource management can be applied at multiple scales.
Monitoring is an essential component of sustainable natural resource management
schemes, and as we begin to confront the need to manage natural resources at the
global scale, the importance of monitoring at the global scale is also growing....
Given the fundamental importance of xylem safety and efficiency for plant survival and fitness, it is not surprising that these are among the most commonly studied features of hydraulic architecture. However, much remains to be learned about the nature and universality of conflicts between hydraulic safety and efficiency. Although selection...
Genetic information for male and female hop accessions is limited, hampering
parental selection to maximize offspring productivity. Our objective
was to determine whether amplified fragment length polymorphism (AFLP)-derived genetic distance (GD[subscript mm]) estimates and coancestry estimates from
pedigrees (GS[subscript ped]) between parental pairs could be used to predict offspring
performance....
The coded wire tag (CWT) database contains detailed information on millions of Pacific salmon
Oncorhynchus spp. released from hatcheries or smolt traps and recovered in the north Pacific Ocean and its tributaries. I used this data set to examine the spatial and temporal variation in the marine distributions of 77...
The amounts of treated wood present at a wood recycling center in western Oregon were surveyed over a 10-year period. Treated wood was found at 106 of 112 inspections, but the levels never exceeded 2 percent of the volume present. The amount of treated wood averaged 0.15 percent of the...
Research has found an upward trend in impulse buying in general, and impulse buying is frequently foreseen among mall shoppers. Impulse purchases account for over $4 billion in annual sales in the U.S. (Mogelonsky, 1998). Retailers have found that over 50 percent of mall shoppers purchase on impulse (Nichols et...
In 2002, oxygen isotope ratios of water (H2
18O/H2
16O), dissolved barium, and salinity were
measured in surface waters around northern North America to identify freshwater sources and to
provide a large-scale background for interpretation of regional inputs and processes. Oxygen isotope
ratios showed that precipitation, river runoff, and sea...
The effects of surface wind speed and direction gradients on midlatitude surface vorticity and divergence fields associated with mesoscale sea surface temperature (SST) variability having spatial scales of 100–1000 km are investigated using vector wind observations from the SeaWinds scatterometer on the Quick Scatterometer (QuikSCAT) satellite and SST from the...
Marine and terrestrial ecologists rarely exchange information, yet comparing research from both sides of the land–sea boundary holds great potential for improving our understanding of ecological processes. For example, by comparing the interaction between tiger sharks (Galeocerdo cuvier) and dugongs (Dugong dugon) to that between gray wolves (Canis lupus) and...
The immune toxicity of the ubiquitous environmental contaminant 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD), commonly referred to as dioxin, has been studied for over 35 years but only recently has the profound immune suppression induced by TCDD exposure been linked to induction of regulatory T cells (Tregs). The effects of TCDD are mediated through...
Of 14 transgenic poplar genotypes (Populus tremula × Populus alba) with antisense 4-coumarate:coenzyme A ligase that were grown in the field for 2 years, five that had substantial lignin reductions also had greatly reduced xylem-specific conductivity compared with that of control trees and those transgenic events with small reductions in...
Intraexciton transitions in semiconductor quantum wells are modulated by strong and tunable few-cycle terahertz pulses. Time-resolved terahertz-pump and optical-probe measurements demonstrate that the 1s heavy-hole and light-hole exciton resonances undergo large-amplitude spectral modulations when the terahertz radiation is tuned near the 1s–2p intraexciton transition. The strong nonlinear optical transients exhibit...
Satellite observations have revealed a remarkably strong positive correlation between sea surface temperature (SST) and surface winds on oceanic mesoscales of 10–1000 km. Although SST influence on the atmosphere had previously been identified from several in situ observational studies, its widespread existence in regions of strong SST gradients throughout the...
Most of the kinetic energy of ocean circulation is contained in ubiquitous
mesoscale eddies. Their prominent signatures in sea surface height have rendered satellite
altimetry highly effective in observing global ocean eddies. Our knowledge of ocean eddy
dynamics has grown by leaps and bounds since the advent of satellite altimetry...
While the impacts of long-term climate change trends on glacier hydrology have received much attention, little has been done to quantify direct glacier runoff contributions to streamflow. This paper presents an approach for determining glacier runoff contributions to streamflow and estimating the effects of increased temperature and decreased glacier area...
The literature on ITQs as a fishery management tool predominantly
assumes that all input prices are parametric. In many if not most fisheries,
however, fishing crews are paid a share of the profits. The paper explores
the efficiency of ITQ markets when crews are remunerated under a share
system. Efficiency...
This chapter describes a mass spectrometry-based strategy that facilitates the unambiguous identification and characterization of proteins modified by lipid peroxidation-derived 2-alkenals. The approach employs a biotinylated hydroxyl amine derivative as an aldehyde/keto reactive probe in conjunction with selective enrichment and tandem mass spectrometric analysis. Methodological details are given for model...
Meat from big game animals (such as deer, antelope, elk, moose, and bear) is a nutritious choice for family meals. You'll enjoy eating it when it's good quality and well-prepared. For best flavor, it's important to handle game carcasses carefully and to butcher and store the meat correctly. This publication...
Ripening tomatoes are a familiar sight in Pacific Northwest gardens and fields during the late summer months. Because the storage life of fresh tomatoes is limited, many households preserve them for year-round enjoyment. Home canning is one of the most popular preservation methods.
When canning tomatoes and tomato products, safe...
Transacting siRNA (tasiRNA) biogenesis in Arabidopsis is initiated
by microRNA (miRNA) –guided cleavage of primary transcripts. In
the case of TAS3 tasiRNA formation, ARGONAUTE7 (AGO7)–
miR390 complexes interact with primary transcripts at two sites,
resulting in recruitment of RNA-DEPENDENT RNA POLYMERASE6
for dsRNA biosynthesis. An extensive screen for Arabidopsis mutants...
Flowering is the primary trait affected by ambient
temperature changes. Plant microRNAs
(miRNAs) are small non-coding RNAs playing an
important regulatory role in plant development. In
this study, to elucidate the mechanism of
flowering-time regulation by small RNAs, we
identified six ambient temperature-responsive
miRNAs (miR156, miR163, miR169, miR172, miR398
and...
The dynamical response of the marine atmospheric boundary layer (MABL) to mesoscale sea surface temperature (SST) perturbations is investigated over the Agulhas Return Current during winter from a 1-month, high-resolution, three-dimensional simulation using the Weather Research and Forecasting (WRF) mesoscale model. A steady lower boundary condition for July 2002 is...
Hip torque production is associated with certain knee injuries. The hip
rotators change function depending on hip angle. Objective: To compare hip-rotator
torque production between 3 angles of hip flexion, limbs, and sexes. Design:
Descriptive. Setting: University sports medicine research laboratory. Participants:
15 men and 15 women, 19–39 y. Intervention:...
A solid, crystalline fumigant (dazomet) with and without a supplemental copper compound was evaluated as an internal decay control treatment on Douglas-fir poles in two long-term field tests. Methylisothiocyanate (MITC), the decomposition
product of dazomet, was used as a measure of effectiveness. MITC levels in the wood were above the...
Cumulative loss of habitat and long-term decline in the populations of the Lesser Prairie-Chicken (Tympanuchus pallidicinctus) have led to concerns for the species’ viability throughout its range in the southern Great Plains. For more efficient conservation past and present distributions of genetic variation need to be understood. We examined the...
We tracked three groups of steelhead Oncorhynchus mykiss smolts implanted with acoustic transmitters to determine whether the degree of hatchery domestication or the juvenile rearing environment (hatchery raceway versus natural stream) influenced migration timing and survival in the Alsea River and estuary, Oregon. Two groups consisted of age-1 smolts reared...
Corrections
18 Mar 2010: Shaman J, Pitzer VE, Viboud C, Grenfell BT, Lipsitch M (2010) Correction: Absolute Humidity and the Seasonal Onset of Influenza in the Continental United States. PLOS Biology 8(3): 10.1371/annotation/35686514-b7a9-4f65-9663-7baefc0d63c0.
15 Mar 2010: Shaman J, Pitzer VE, Viboud C, Grenfell BT, Lipsitch M (2010) Correction: Absolute Humidity...
We quantified the juvenile rearing and migratory patterns of individuals from a population of fall-spawning Chinook salmon Oncorhynchus tshawytscha in Oregon's Salmon River estuary using otolith microchemistry and microstructure. The study confirmed the daily periodicity of otolith growth increments in a natural fish population under field conditions and validated fundamental...
Recent analysis of 38 globally distributed paleoclimatic records covering Marine Isotope Stage 3 (MIS 3) 60–26 ka demonstrated that the two leading empirical orthogonal functions (EOFs) explaining the data are the Greenland ice-core signal (“northern” signal) and the Antarctic ice-core signal (“southern” signal). Here singular spectral analysis (SSA) is used...
Small-scale urban natural parks have the potential to contribute to the health and well-being of urban communities. Although recreation researchers have seldom focused on such areas, recreation research theory can be successfully applied to urban natural parks, especially if augmented by the application of social capital and social networks theory....
Seamounts are ubiquitous features of the seafloor that form part of the fabric of oceanic crust. When a seamount enters a subduction zone, it has a major affect on forearc morphology, the uplift history of the island arc, and the structure of the downgoing slab. It is not known, however,...
Poly(ethylene glycol)-block-poly(aspartate-hydrazide) (PEG-p(Asp-Hyd)) was modified using either levulinic acid (LEV) or 4-acetyl benzoic acid (4AB) attached via hydrazone bonds. Paclitaxel (PTX) conjugated to the linkers formed PEG-p(Asp-Hyd-LEV-PTX) and PEG-p(Asp-Hyd-4AB-PTX). PEG-p(Asp-Hyd-LEV-PTX) and PEG-p(Asp-Hyd-4AB-PTX) assemble into unimodal polymeric micelles with diameters of 42 nm and 137 nm, respectively. PEG-p(Asp-Hyd-LEV-PTX) and PEG-p(Asp-Hyd-4AB-PTX) at...
Nematodes are tiny but complex unsegmented roundworms that are anatomically differentiated for feeding, digestion, locomotion, and reproduction. These small animals make important contributions to organic matter decomposition and to the food chain. Some species, however, are parasitic to plants or animals. This publication provides a description and information on biology,...
This study examined relations among early family risk, children’s behavioral regulation at 54
months and kindergarten, and academic achievement in first grade using data on 1,298 children
from the National Institute of Child Health and Human Development (NICHD) Study of Early
Child Care and Youth Development. Family risk was indexed...
Collocated Moderate Resolution Imaging Spectroradiometer (MODIS) imagery and
Cloud‐Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) 532 nm
total attenuated backscatter coefficients were used to identify 50 km scale segments
for ocean regions that had only a single layer of marine stratocumulus. On the basis of
whether the underlying ocean...
In this paper the authors investigate the action of ambient turbulence on thermohaline interleaving using both theory and numerical calculations in combination with observations from Meddy Sharon and the Faroe Front. The highly simplified models of ambient turbulence used previously are improved upon by allowing turbulent diffusivities of momentum, heat,...
The effects of precommercial thinning on the understory vegetative cover of 16- to 18-year-old spruce–hemlock (Picea sitchensis (Bong.) Carrière – Tsuga heterophylla (Raf.) Sarg.) stands were studied in seven replicate areas over seven growing seasons postthinning. Vegetative cover was analyzed at the class level, but species-specific effects were examined in...
Internal tides on the continental shelf can be intermittent as a result of changing hydrographic conditions
associated with wind-driven upwelling. In turn, the internal tide can affect transports associated with upwelling.
To study these processes, simulations in an idealized, alongshore uniform setup are performed utilizing
the hydrostatic Regional Ocean Modeling...
Electric and magnetic fields in the (10−4–1.0) Hz band were monitored at two sites
adjacent to the San Andreas Fault near Parkfield and Hollister, California, from 1995 to
2007. A data window (2002–2005), enclosing the 28 September 2004 M6 Parkfield
earthquake, was analyzed to determine if anomalous electric or magnetic...
Double excitonic absorption peaks are observed in textured BaCuSF and BaCuSeF thin films. The excitonic doublet separation increases with increasing fraction of heavy chalcogen in the thin-film solid solutions, in good agreement with the spin-orbit splitting of the valence bands calculated by density-functional theory. In BaCuSF and BaCuSeF, the excitons...
In situ photoemission spectroscopy experiments are used to characterize the interface between ZnTe and the wide band gap p-type semiconductor BaCuSeF. The contact is characterized by a null valence-band offset, a large conduction-band offset, and a chemically graded interface. By applying the transitivity rule for band offset and on the...
Comprehensive observations of velocity, density, and
turbulent dissipation permit quantification of the nonlinear
internal wave (NLIW) contribution to vertical heat flux and
lateral mass transport over New Jersey’s shelf. The effect of
NLIWs on the shelf heat budget was significant. On
average, heat flux in NLIWs was 10 times larger...
A novel swine-origin H1N1 influenza A virus has been identified as the cause of the 2009 influenza pandemic in humans. Since then, infections with the pandemic (H1N1) 2009 influenza virus have been documented in a number of animal species. The first known cases of lethal respiratory disease associated with pandemic...
Sea surface temperature variations along the entire U.S. East Coast from 1875 to 2007 are characterized using a collection of historical observations from lighthouses and lightships combined with recent buoy and shore-based measurements. Long-term coastal temperature trends are warming in the Gulf of Maine [1.0° ± 0.3°C (100 yr)⁻¹] and...
The intraseasonal variability of turbulent surface heat fluxes over the Gulf Stream extension and subtropical mode water regions of the North Atlantic, and long-term trends in these fluxes, are explored using NCEP–NCAR reanalysis. Wintertime sensible and latent heat fluxes from these surface waters are characterized by episodic high flux events...
Borehole temperature profiles provide a record of ground surface temperature (GST)
change at the decadal to centennial time scale. GST histories reconstructed from boreholes
are particularly useful in climate reconstruction if changes in GST and surface air
temperature (SAT) are effectively coupled at decadal and longer time periods and it...
We examine the relation between δ¹⁸O in rainwater collected in southwestern Oregon
and climate variables including temperature, parcel trajectory, precipitation amount, and
specific humidity. Local surface air temperature at the time of sample collection explains a
large proportion of δ¹⁸O variability, suggesting that paleoclimatic archives that are related
to rainfall...
BaCuChF (Ch=S,Se,Te) surfaces and BaCuSeF interfaces with zinc phthalocyanine (ZnPc) were studied by photoelectron spectroscopy. BaCuChF compounds oxidize when exposed to ambient atmosphere. Se capping layers were studied as a means to produce representative surfaces for photoelectron spectroscopic measurements. Decapped BaCuSeF surfaces remain O-free and C-free when the Se layer...
Time‐dependent buoyant plumes form at the outflow of tidally dominated estuaries. When estuary discharge velocity exceeds plume internal wave speed c, a sharp front forms at the plume’s leading edge that expands from the time‐dependent source. Using observations of the Columbia River tidal plume from multiple tidal cycles we characterize...
Test taking is a humiliating experience for many students, with no perceived direct educational benefit. That need not be so. When circumstances allow, I use a two-pen method of collaborative testing. Students have told me that they leave the exam having figured out what they didn’t understand, filled in the...
Accurate methods are needed to measure changing soil water content from meter to kilometer scales. Laboratory results demonstrate the feasibility of the heat pulse method implemented with fiber optic temperature sensing to obtain accurate distributed measurements of soil water content. A fiber optic cable with an electrically conductive armoring was...
Through its role in the energy and water balances at the land surface, soil moisture is a key state variable in surface hydrology and land-atmosphere interactions. Point observations of soil moisture are easy to make using established methods such as time domain reflectometry and gravimetric sampling. However, monitoring large-scale variability...
A numerical study on the dynamic response of a generic rigid water-landing object (WLO) during water impact is presented in this paper. The effect of this impact is often prominent in the design phase of the re-entry project to determine the maximum force for material strength determination to ensure structural...
Ocean Wave Energy Converters (OWECs) operating on
the water surface are subject to storms and other extreme
events. In particular, high and steep waves, especially
breaking waves, are likely the most dangerous to OWECs. A
method for quantifying the breaking severity of waves is
presented and applied to wave data...
An experimental study of the dynamics of a generic rigid body during water impact and an equivalent-radius approximate analytical procedure is developed and calibrated in this study. The experimental tests in a wave basin covered a range of drop heights using a 1/6th-scale model of a practical water-landing object prototype...