Modern day digital systems employ frequency
synthesizers to provide a common clock to the system.
They are undergoing large scale integration due to which, mitigation
of the effect of noise on power supply has become a major design consideration
in clocking circuits. Rapid scaling of CMOS technology mandates the
design...
The objective of this project was to develop an analytical model of a light-framed wood structure using a prevalent structural analysis computer program in order to evaluate system effects and define load paths within the structure, especially under extreme wind events. Simplified modeling techniques and material definitions were developed and...
This dissertation presents an incremental analog-to-digital converter (ADC) with digital digital-to-analog converter (DAC) mismatch correction. A theoretical time-domain analysis technique was developed to predict the noise performance of the incremental ADC, and a new optimization technique was proposed to minimize the output noise.
In the calibration mode, the incremental ADC...
The objective of this thesis is to provide an initial demonstration of two-terminal and three-terminal electronic devices employing amorphous multi-component metallic film
(AMMF) electrodes. Such a demonstration is successfully achieved in the fabrication of metal-insulator-metal (MIM) diode and hot electron transistor (HETs) structures employing ZrCuAlNi AMMF electrodes. The ultra-smooth surface...
This thesis explores open questions regarding molecular forms and interactions of natural and synthetic aromatic compounds present in soils and sediments.
Plant biomass-derived black carbon (biochar) generated through incomplete natural and anthropogenic combustion processes is a major source of aromaticity in terrestrial ecosystems. Chapter one represents a detailed account of...
A proposed state-and-transition model (STM) for the Deep Sand Savannah ecological site in central New Mexico was developed using historical data and expert knowledge. This STM was tested utilizing data from short and long term one-seed juniper (Juniperus monosperma (Engelm.) Sarg.) control experiments initiated in 1981 and 1985. Utilizing data...
The development of micro total analysis systems (µTAS), also called “lab-on-a-chip”, or microfluidic analysis systems, is presented in this dissertation. Various research areas, covering subjects from magnetic particles synthesis to novel microchip fabrication techniques, are explored to develop a lab-on-a-chip system capable of performing magnetic bead-based bioassays. These devices are...
Concern over the increasing proportion of juvenile wood grown in second growth plantations has led to a large amount of research on the effects of common silvicultural practices on wood quality. Lacking is research on the effect of timing and
duration of vegetation control on wood quality near the pith...
Transient liquid-phase diffusion brazing is used in precision, hermetic joining applications as a replacement for diffusion bonding to reduce cycle times, reduce bonding pressure and improve yields. Studies showed that the interlayer used in diffusion brazing can be detrimental due to the use of melting point depressants (MPDs). The goal...
Met is a prognostic indicator of colorectal cancer patient survival. Therapies that target Met may therefore have beneficial outcomes in the clinic. Recently, EGCG was reported to suppress Met activation, although the mechanisms were not elucidated. HCT116 and HT29 human colon cancer cells were used to examine the relationships between...
The number of endangered species is rapidly increasing while paucity of adequate information and resources delays establishment of conservation actions. The IUCN’s listing system is insufficient to determine conservation priorities and many species lack information even to be evaluated (i.e., “data deficient”). Here I proposed and tested the Rapid Endangered...
This research sought to explore the implications of different tenure regimes for both
landscape-level ecological processes and the overall resilience of a social-ecological
system in Central Oregon. The purchase by an investor of former industrial timberlands
known as the Bull Springs tract raised the specter of dispersed residential development on...
This paper provides a measurement-based performance evaluation of the Optimized Link State Routing (OLSR) protocol. Two versions of OLSR, OLSR-ETX and OLSR-ETT, are implemented and evaluated on a mesh network that we built from off-the-shelf commercial components. OLSR-ETX uses the Expected Transmission Count (ETX) metric whereas, OLSR-ETT uses the Expected...
This thesis presents an approach to develop innovative methods for decontamination and surface protection applicable to naval nuclear ships and potentially, personnel, replacing antiquated techniques. To accomplish this goal, two products manufactured by CBI Polymers, LLC., DeconGel™ 1101 (1101) and a shampoo, DeconGel™ "prototype" (prototype), were tested.
The prototype was...
The overall goal of this project was to design a wood frame shear wall that could withstand greater displacement before damage occurred to the Gypsum Wall Board (GWB). More specifically, the objectives of the study were: (1) to evaluate damage to the GWB in alternative shear wall designs at 1%,...
Histone deacetylase (HDAC) inhibitors have the potential to de-repress epigenetically silenced genes in cancer cells, leading to cell cycle arrest and apoptosis. Dietary HDAC inhibitors derived from natural phytochemicals are promising anticancer agents. In this thesis, metabolites from natural organosulfur and organoselenium compounds, i.e. allyl mercaptan (AM), β-methylselenopyruvate (MSP) and...
This dissertation describes the application and development of molecular tools that have great potential for use in studying variation in strawberry germplasm. The first study evaluated 91 microsatellite (simple sequence repeat, SSR) markers for transferability in 22 Fragaria species and their utility in fingerprinting octoploid strawberries. Out of the transferable...
The Clean Water Act imposes Total Maximum Daily Load (TMDL) limits on pollutant concentrations within wastewater effluent; in Oregon, thermal discharge is one of the pollutants subject to regulation. The City of Woodburn, Oregon, funded a series of pilot scale studies to investigate the utility of natural systems to reduce...
Summertime, wind-driven upwelling off the Oregon coast delivers nutrient rich water to the surface that fuels the autotrophic production of particulate organic carbon (POC). This POC can be transported horizontally by fluid motions and vertically by sinking to the bottom where it can be entrained in the benthic boundary layer...
The forest alpine tundra ecotone (FTE, also known as alpine treeline or subalpine parkland), is a conspicuous feature of mountain landscapes throughout the world. Climate change-driven increases in temperature are believed to result in FTE movement and tree invasion of subalpine meadows, which have been documented throughout the Northern Hemisphere...
This essay presents a case study of the Regional Gravel Initiative (RGI) workshop, one instance of policy makers using science to inform decision making for sustainable and streamlined processes. The RGI consists of eight agencies, both federal and state, with responsibilities for informing and issuing permits for mining aggregate on...
Various applications like wireless UWB communication, fast data acquisition systems and digital storage oscilloscopes needs ADCs with instantaneous input signal bandwidth from 0.1-40 GigaHertz range with 6-10 bits of resolution -- a challenging task and an impressive goal to achieve. Flash ADCs have been conventionally employed to achieve these goals...
Currently, the only anthrax vaccine licensed for human use in the United States is the Anthrax-vaccine-absorbed (AVA or Biothrax®). AVA suffers from several drawbacks, including a complicated and lengthy dosing schedule that requires six initial injections administered over eighteen months, followed by annual boosters. Therefore, a new generation anthrax vaccine...
The Lakes Basin Bibliography consists of over 600 references relating to the natural resources of Oregon’s Lakes Basin. Forty percent of the items listed are available to anyone online though not all links are persistent. The remaining sixty percent are held in at least one library either in print or...
Research conducted on humpback whitefish Coregonus pidschian in the Copper River Delta, Alaska has revealed a complex life history involving seasonal migrations and the occupation of a variety of freshwater and marine habitats including lacustrine, riverine, estuarine, and marine. Forty-five whitefish were tagged with radio transmitters in 2006 and 2007,...
Work on individually constructed devices has demonstrated that nanowires (NWs) offer great promise for applications such as sensing and optoelectronics. Despite this work, reliable large scale alignment and integration of these individual nanostructures into a lithographically defined process remains a challenge.
Dielectrophoresis (DEP) is a promising alignment method in which...
Seamounts are windows into the deep Earth that are helping to
elucidate various deep Earth processes. For example, thermal and mechanical
properties of oceanic lithosphere can be determined from the flexing of oceanic
crust caused by the growth of seamounts on top of it. Seamount trails also are
excellent recorders...
The anaerobic and highly reductive conditions found in the ovine rumen are considered favorable for the degradation of the nitroaromatic explosives such as hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX). In this study, we used stable-isotope-probing to determine the bacteria responsible for the degradation of RDX in the rumen. Results indicate 10 μg mL⁻¹ (45...
Magnetically programmable surface acoustic wave (MP SAW) devices were designed, fabricated and characterized in this thesis using integrated giant magnetoresistive (GMR) bits with interdigital reflectors. This provides a proof of concept of a novel storage element on radio frequency identification tags. Interdigital transducers (IDTs) on a piezoelectric substrate are used...
The goal of Advanced Fuel Cycle Initiative program is to efficiently separate and recover actinides in attempts to reprocess irradiated nuclear fuel and reduce the necessary storage volume. In order to facilitate large-scale industrial
applications of liquid-liquid separation processes, knowledge of the thermodynamic constants associated with the distribution of metal...
This thesis develops a manual for interpreters at six National Park Service areas established to preserve and interpret fossils of the Cenozoic Era: Fossil Butte National Monument (Wyoming), John Day Fossil Beds National Monument (Oregon), Badlands National Park (South Dakota), Florissant Fossil Beds National Monument (Colorado), Agate Fossil Beds National...
BaCuChF (Ch = S, Se, Te) materials are chalcogen-based transparent conductors with wide optical band gaps (2.9 – 3.5 eV) and a high concentration of free holes (10¹⁸ – 10²⁰ cm⁻³) caused by the presence of copper vacancies. Chalcogen vacancies compensate copper vacancies in these materials, setting the Fermi level...
This dissertation focuses on the predator-prey relationship between two species of avian predators, Caspian terns (Hydroprogne caspia) and double-crested cormorants (Phalacrocorax auritus), and one of their important prey types, juvenile salmonids (Oncorhynchus spp.), in the Columbia River estuary of Oregon and Washington states during the period 1998 – 2007. I...
Probability-based reliability methods have placed an increased emphasis on realistic simulation of structural behavior in bridge engineering. Uncertainty is present in every aspect of structural analysis. Aleatory uncertainties in the loading and load-carrying capacities, and epistemic uncertainties in mathematical idealization of bridge systems are the major contributors to uncertain structural...
New acceptor-type graphite intercalation compounds (GICs) containing perfluoroalkyl anions have been synthesized by using both chemical and electrochemical methods and characterized by elemental and thermogravimetric analyses. Investigation into these graphite intercalation compounds can provide novel materials and a detailed understanding of their properties.
GICs of composition Cx[FB(C₂F₅)₃]·δF are prepared for...
Comparative investigations based on volcanic morphology suffer from the lack of a large terrestrial baseline for comparison. To fill this gap, the Lava Flow Morphology Database (LAMDA) was proposed as a GIS based central clearinghouse for remote and field investigations of volcanic morphology. This study presents an analysis of LAMDA’S...
Vertebrates communicate with one another and coordinate intraspecific reproduction by using a variety of sexually dimorphic signals, such as plumage, ornaments, sounds, and/or scents. These sexual dimorphisms are maintained by physiological factors, typically sex-specific hormones (though see Chapter 3 for an exception). The purpose of the research in this dissertation...
Peroxiredoxins (Prxs) are dominant peroxide-reducing enzymes with two important roles: they protect all organisms from oxidative damage induced by peroxides, and in eukaryotes, they participate in hydrogen peroxide signaling pathways. This dissertation presents studies aimed at the biophysical characterization of select Prxs and a Prx reductase to elucidate their structure-function...
Cytoplasmic dynein is an ATP-dependent, microtubule-based molecular motor involved in the positioning and trafficking of cellular cargo. The cargo binding sub-domain of dynein contains the natively disordered intermediate chain (IC) and the homodimeric light chains (Tctex1, LC8 and LC7). The structure and stoichiometry of this complex, how the light chains...
Formaldehyde-based adhesives such as urea-formaldehyde (UF), phenol-formaldehyde (PF) are widely applied in wood-based composite industry. However, these adhesives are all petrochemical-based and could not sustain in a long term due to a limited reserve of oil and natural gas. Moreover, these adhesives emit carcinogenic formaldehyde in the production or use...
This research details laboratory assessment of bacterial hydrophobicity, variations in bacterial adhesion properties with growth and extended starvation as well as extension of this assay to colloidal hydrophobicity measurement. Hydrophobicity is an integral component of surface interactions and has been studied extensively for its role in a number of engineering...
Enhanced pool boiling critical heat fluxes (CHF) at reduced wall superheat on nanostructured
substrates are reported. Nanostructured surfaces were realized using a low temperature process,
microreactor-assisted-nanomaterial-deposition. Using this technique we deposited ZnO nanostructures
on Al and Cu substrates. We observed pool boiling CHF of 82.5 W/cm2 with water as
fluid...
Large numbers of reinforced concrete deck girder bridges that were constructed during the
interstate system expansion of the 1950s have developed diagonal cracking in the stems.
Compared to the present AASHTO-LRFD standards, the provisions of the 1950s allowed
for higher shear stress in the concrete, thus reducing the amount of...
From April 2009 to February 2010, coupons of materials which could be used in the rotor, drive train, or foundation of tidal energy devices were deployed in-situ on the seabed at a prospective tidal energy site to screen for biofouling and corrosion. Materials include glass and carbon fiber composites, stainless...
The application was prepared for the Port of Newport by Pacific Habitat Services and John van Staveren. It was submitted to the Army Corps of Engineers - Portland in May 2010.
Voluntary environmental programs (VEPs) have been created to encourage companies to engage in behaviors that mitigate environmental impacts (e.g., recycling, emissions reduction). Many ski areas participate in the Sustainable Slopes Program, an initiative that promotes VEPs in the ski area industry. Past research has addressed the performance of VEPs in...
The generation mechanism for downslope windstorms was shown to vary according to inversion height and strength using a series of numerical experiments. Strong low level inversions were dominated by interfacial waves on the inversion, while high level inversion and cases without an inversion were dominated by internal gravity wave (IGW)...