Index Catalog // ScholarsArchive@OSU

Creating High Throughput Low Cost Analysis of Different Labor-Intensive Repetitive Research Processes

Creator:: Sullivan, Christopher M.
Abstract:: Many research projects suffer from limited data causing poor statistical analysis or limited results. The movement to high throughput methods has been building for many years and cross many different disciplines. Lots of these methods start out using pathways that generate large amounts of data but have limited methods to...
Resource Type:: Masters Thesis
Full Text:: to the Center for Genome Research and Biocomputing for all the computational resources. The author

Investigating Transcriptional Control of Specialized Gene Expression in Plants

Creator:: Fraser, Valerie N.
Abstract:: Specialized or secondary metabolism is a collection of pathways and small molecules that, while beneficial to an organism, are not strictly necessary for survival. Plants use secondary metabolites to, among other things, attract pollinators, defend against biotic and abiotic stressors, and form symbioses. Natural products from plants have seen an...
Resource Type:: Dissertation
Full Text:: have implications for human use. One of the main limitations in natural product research is the

Toxicogenomic Biomarkers Associated with PAH Carcinogenic Potential in a 3D in Vitro Bronchial Epithelial Model

Creator:: Chang, Yvonne
Abstract:: The environmental health science community recognizes polycyclic aromatic hydrocarbons (PAHs) as a re-emerging class of environmental pollutants due to their persistence and prominence in mixtures of concern. Due to their widespread distribution in the environment, exposure to PAHs often occur as complex chemical mixtures. Exposures are linked to numerous adverse...
Resource Type:: Dissertation
Full Text:: support research scrutinizing the applicability of the RPF, where assumptions of similar MOA are

Influence of Oceanographic Conditions on Copepod (Calanus pacificus) Genetic Expression

Creator:: Bynes, Kenya S.
Abstract:: RNAseq data among copepods (Calanus pacificus) were sampled and analyzed in relation to oceanographic and climatic conditions to determine if new information derived from such an approach might assist applications that use copepods as ecosystem indicators to predict fishery yields. These samples were taken as part of long-term studies conducted...
Resource Type:: Masters Thesis
Full Text:: . I would also like to thank the Center for Genome Research and Biocomputing (CGRB) for teaching me

Effects of Whey Protein Isolate on the Human Gut Microbiota and Intestinal Function in Older Adults

Creator:: Rackerby, Bryna
Abstract:: Whey protein is a functional food comprised of numerous bioactive peptides and proteins, including glycomacropeptide (GMP), a hydrophilic casein peptide that separates with the whey fraction during cheesemaking. GMP has a unique amino acid composition, making it a viable nutritional therapy in disorders where certain amino acids are implicated, while...
Resource Type:: Masters Thesis
Full Text:: ; Cui et al., 2017), however research has focused on immune modulation rather than a microbial

Using PCR techniques to assess Chlamydia trachomatis genome

Creator:: Moo-Fuentes, Jordi C.
Abstract:: Chlamydia possesses an immense importance within both human and animal medicine when looking at pathogens. Chlamydia trachomatis infections have been shown to affect both the eye and genital tracts in millions of humans and animals every year [13]. As C. trachomatis strains are highly conserved in patients, it has made...
Resource Type:: Honors College Thesis
Full Text:: Using PCR Techniques to Assess Chlamydia trachomatis genome

Genome Resource Development for Advancement of Corylus avellana Breeding

Creator:: Talbot, Samuel Corcoran
Abstract:: The European hazelnut (Corylus avellana L.) is a tree nut crop that is important in Oregon, which produces 99% of the United States’ hazelnuts but only 5% of the world’s supply. In order to maintain this market share, farmers in Oregon need cultivars that produce high quality nuts, mature early,...
Resource Type:: Masters Thesis
Full Text:: : Genome Resource Development for Advancement of Corylus avellana Breeding. Abstract approved

Hi-C genome assembly of the ectomycorrhizal fungus Rhizopogon salebrosus

Creator:: Har, Skyler
Abstract:: Rhizopogon salebrosus is an abundant ectomycorrhizal fungus common throughout Western North America that forms mutualistic partnerships with Pinus species. Studied for its systematics, use in sapling nurseries, post-fire seedling establishment, and unique evolutionary history, R. salebrosus holds many secrets within its genome. This thesis aims to characterize the mating system,...
Resource Type:: Honors College Thesis
Full Text:: Hi-C Genome Assembly of the Ectomycorrhizal Fungus

Evolutionary Dynamics of Genomes and Endosymbionts in Plant-Parasitic Nematodes

Creator:: Wasala, Wasala Mudiyanselage Sulochana K.
Abstract:: Plant-parasitic nematodes cause more than US $100 billion in annual agriculture loss worldwide. Thorough knowledge of their genetic diversity, and interactions with endosymbionts and environment have the potential to provide valuable insights into the basic biology of these animals, and assist future efforts aimed at management of these plant parasites....
Resource Type:: Dissertation
Full Text:: host systems (Margulies et al., 2005). In the dissertation research presented here, whole genome

Gene expression of four carbonic anhydrase paralogs across the symbiotic states of the model temperate sea anemone, Anthopleura elegantissima (Brandt 1835)

Creator:: Meier, Emily K.
Abstract:: Anthropogenic CO₂ emissions are shifting the global climate equilibrium, causing widespread losses in biodiversity. Anthozoan cnidarians are some of the species most vulnerable to environmental change. Environmental stress causes corals and sea anemones to expel their endosymbiotic algae, which constitute a primary source of nutrition for some Anthozoa. Carbonic anhydrase...
Resource Type:: Honors College Thesis
Full Text:: differentially expressed between B. muscatinei- and E. marina-harboring anemones. This research supports

ScholarsArchive@OSU

Creating High Throughput Low Cost Analysis of Different Labor-Intensive Repetitive Research Processes

Investigating Transcriptional Control of Specialized Gene Expression in Plants

Toxicogenomic Biomarkers Associated with PAH Carcinogenic Potential in a 3D in Vitro Bronchial Epithelial Model

Influence of Oceanographic Conditions on Copepod (Calanus pacificus) Genetic Expression

Effects of Whey Protein Isolate on the Human Gut Microbiota and Intestinal Function in Older Adults

Using PCR techniques to assess Chlamydia trachomatis genome

Genome Resource Development for Advancement of Corylus avellana Breeding

Hi-C genome assembly of the ectomycorrhizal fungus Rhizopogon salebrosus

Evolutionary Dynamics of Genomes and Endosymbionts in Plant-Parasitic Nematodes

Gene expression of four carbonic anhydrase paralogs across the symbiotic states of the model temperate sea anemone, Anthopleura elegantissima (Brandt 1835)

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