Pyrenophora tritici-repentis, causal agent of tan spot of wheat, produces multiple
host-selective toxins (HSTs), including Ptr ToxA, encoded for by ToxA, Ptr ToxB,
encoded for by ToxB, and Ptr ToxC. Variable distribution of these three HSTs among
different isolates of P. tritici-repentis, both singularly and in all possible combinations,
defines...
The objective of this study was to characterize an unknown agent associated with decline in black raspberry (Rubus occidentalis) in Oregon. A virus was found consistently associated with decline symptoms of black raspberries and was named Black raspberry decline associated virus (BRDaV). Double stranded RNA extraction from BRDaV-infected black raspberry...
Four key aspects of the relationship between predatory hoverflies and the aphid pest Brevicoryne brassicae L. on broccoli were investigated in the Willamette Valley, Oregon USA: 1) the relationship between aphid density and hoverfly oviposition, 2) the larval voracity of key hoverfly species, 3) the preferences of hoverflies and broccoli...
This study explores the intrapersonal and interpersonal ecological factors that influence adolescent females' perceptions of sex and the extent to which their perceptions of sex impact onset of sexual intercourse as they mature. Particular attention is given to how depression influences individual, personal and social factors in an adolescent female's...
Complex oscillations including chaotic motions have been identified in off-shore and submerged mooring systems characterized by nonlinear fluid-structure interactions and restoring forces. In this paper, a means of controlling these nonlinear oscillations is addressed. When applied, the controller is able to drive the system to periodic oscillations of arbitrary periodicity....
The DNA mismatch repair (MMR) pathway maintains genomic stability and
reduces cancer risk (colorectal and other internal cancers) by correcting polymerase
errors and activating cell cycle checkpoints and apoptosis in response to DNA damage.
Few studies have examined the influence of commonly encountered environmental
mutagens/carcinogens on the etiology of MMR-deficient...
A unique channel surface enhancement technique via diffusion-bonding a layer of conductive fine wire mesh onto the heating wall was developed and used to experimentally study flow boiling enhancement in parallel microchannels. Each channel was 1000 μm wide and 510 μm high. A dielectric working fluid, HFE 7000, was used...
Electrocardiogram (ECG) data are stored and analyzed in different formats,
devices, and computer platforms. There is a need to have an independent platform
to support ECG processes among different resources for the purposes of improving
the quality of health care and proliferating the results from research. Currently,
ECG devices are...
Soil organic matter (SOM) is the terrestrial biosphere's largest pool of organic carbon (C) and is an integral part of C cycling globally. Soil organic matter composition typically can be traced directly back to the type of detrital inputs; however, the stabilization of SOM results as a combination of chemical...
New methods, sensors, and devices based on redox indicators were developed to
monitor redox conditions in anoxic and anaerobic laboratory systems and the subsurface
environment. The primary application was monitoring redox conditions
during the dechlorination of tetrachioroethene (PCE) to ethene (ETH) in packed
columns and microcosm bottles containing an enriched...
2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD) and related compounds are well-recognized for their immunosuppressive activity, which is mediated through an intracellular receptor and transcription factor, aryl hydrocarbon receptor (AhR). Laboratory animals exposed to TCDD are less resistant to infection and have severely impaired humoral and cell-mediated immune responses. This dissertation addressed the hypothesis that...
Overweight and obesity are a growing national concern, particularly among women and selected minority populations (Ayala, Elder, Campbell, Slymen, Roy, Engelberg, et al., 2004; NHANES, 2003). Pregnant women bear a disproportionate risk of becoming overweight or obese (Greene, Smickikias-Wright, Scholl, & Karp, 1988; Gunderson et al., 2000; Rossner, 1999). Although...
Sources of polar/water-soluble organic compounds conjunctly with apolar biomarkers were characterized in natural organic matter. This multi-biomarker approach was accomplished by a simple analytical method consisting of extraction with dichloromethane:methanol (2:1, v/v), silylation and analysis by gaschromatography- mass spectrometry (GC-MS). Polar and apolar biomarkers, derived mainly from higher plants and...
Data from nuclear ribosomal internal transcribed spacer regions (nrITS) and chloroplast DNA (cpDNA) have failed to resolve phylogenetic relationships in Pinus. To provide greater interspecific resolution, five low-copy nuclear genes were developed from mapped conifer anchor loci. Four genes were sequenced from species representing all Pinus subsections. Individual loci do...
Distribution of Vibrio parahaemolyticus in Oregon and Washington oystergrowing areas was studied between November 2002 and October 2003. V. parahaemolyticus was detected in 14.3% of oyster, 23.0% of seawater, and 44.4% of sediment samples with very low levels (≤7.4 MPN/g) of pathogenic strains being detected in oysters. Occurrence of V....
Intrinsic characteristics of Pacific sardines were determined. The lipid content
in sardines was initially low (6.79%) in the beginning ofthe season, increased to
22.95% in mid-August, and decreased slightly by the end of September. An inverse
correlation (R² = -0.90) was found between lipid and moisture content. Analysis
showed that...
We present a study of the ocean circulation using state of the art numerical and data assimilation techniques. The second chapter of the thesis presents the development and application of generalized inversion to a simple dynamical model of Lake Kinneret. The intent was to develop the necessary tools to implement...
Dithiocarbamates are widely used agricultural pesticides, industrial chemicals and
effluent additives. DTCs and their related compounds have historical and current
relevance in clinical and experimental medicine. DTC developmental toxicity is well
established, but poorly understood. Dithiocarbamates according to the U.S. EPA have a
mechanism of action involving, "the inhibition of...
The aroma of milk has been often defined as bland and pleasant, yet characteristic. Conventional thermal processing of milk can certainly extend shelf life, but inevitably changes its flavor. High pressure processing has been suggested as an alternative for milk pasteurization with improved fresh flavor retention. The objective of this...
Traditional modeling of fluidized bed operations has focused on the development of models and correlations for specific systems or narrow areas of application. With recent advances in computing power, new methods of modeling fluidization are possible. One such approach is the Computational Fluid Dynamic Discrete Particle Method (CFD-DPM), which treats...
It is often perceived that late maturity of grape gives a more complex aroma
profile to Pinot noir wine, however, there is little understanding of the basic flavor
chemistry of grape maturity on wine aroma. The aroma contributing compounds in
Pinot noir were first identified by aroma extract dilution analysis...
Sensory properties of four important volatile sulfur compounds, dimethyl disulfide (DMDS), diethyl disulfide (DEDS), methanethiol (MeSH) and ethanethiol (EtSH), were determined in base Oregon Pinot noir wine in order to understand their impacts on wine aroma. Detection thresholds of these four compounds in base wine were determined first. All four...
A large number of river otter (Lontra canadensis) males were collected
from areas of high and low contaminant concentrations throughout western
Oregon and Washington during the fall and winter of 1994-99. Few significant
non-reproductive organ morphometric differences were found in the large series
of male otters collected, except for adrenal...
Grounded in life span theory, this study explored how personal goals (as measured by possible selves) related to depressive symptoms in older adults. Possible selves represent individuals' ideas of what they would like to become (hoped-for selves) and what they are afraid of becoming (feared selves). Possible selves are also...
Greater sage-grouse (Centrocercus urophasianus) populations declined range wide during the past 50 years. Grouse populations were 2-3 times larger than the current population as recently as the early 1970's. In addition to habitat loss and fragmentation, declines were attributed habitat degradation that caused reduced productivity. Because chick survival remains the...
This research focused on the experiences of 15 low income Mexican women immigrants participating in MAS and Superando, two family literacy programs at the center of these women's sociocultural change. This research sought to understand the extent to which participation in these two programs empowers women to create change in...
Amphidinolide B₁ is one of the most potent cytotoxic compounds in the
amphidinolide family. Its bioactivity and intriguing structure has drawn
attention from synthetic chemists. Although numerous synthetic efforts toward
the total synthesis of amphidinolide B₁ have been published, it still remains an
unconquered synthetic target.
One of the unique...
Natural and synthetic estrogenic compounds detected in surface waters have
been linked to endocrine signaling disruption in several species. Endogenous
estrogen contributes to cartilage and bone deposition during development in
vertebrates, and is susceptible to perturbation from xenoestrogens. The goals of
this work were to develop a teleost model to...
This research focused on the enhanced reductive dechlorination of trichloroethene (TCE) and its surrogate, trichlorofluoroethene (TCFE), using two bioremediation methods in anaerobic conditions. Two anaerobic bioremediation studies were conducted to investigate the effects of microbial communities in the presence of different electron acceptors and donors during anaerobic reductive dechlorination of...
Hard white winter (HVVW) wheat cultivars must have superior protein quality and consistent processing quality to be successful in the Asian market. New cultivars and management strategies are needed to produce HVVW grain for both bread and noodle applications from diverse environments in the US Pacific Northwest (PNW). This study...
This work furthers the understanding of processes occurring in catchments that affect stream nitrate concentrations using two different approaches: a temporally intensive case study of three headwater catchments with varying land use (through storm event monitoring) and a spatially intensive study on the regional scale (through statistical modeling) of 1st-4th...
Calcium is important to bone health as well as related to a number of health problems such as osteoporosis, hypertension, cardiovascular disease, and some cancers. Calcium intake level was far below the Dietary Reference Intake and dairy product consumption was inconsistent with the Daily Dietary Guidelines among adolescents in Taiwan...
This dissertation consists of three papers on land use economics and regulation. The first paper focuses on the environmental impacts of land use and their implications for the design on water quality trading policies. The second and third papers address local land use regulations and their impact on land values...
Micro Energy and Chemical Systems (MECS) devices enable at least two
areas of benefit due to the accelerated heat and mass transfer that can be
accomplished in microchannels. First, MECS devices enable process
intensification; the ability to reduce the volume of space needed to implement
systems of thermal and chemical...
Improving quality of hard white wheat (HW) cultivars in the Pacific Northwest is important to expand exports to Asia. Asian food processors prefer HW grain that can satisfy an array of baking needs, as well as produce superior quality noodle products. Three experimental populations were developed from single cross and...
Since the 1890s, American federalism has been perceived as being unique in the world by having two different levels of government operating within the same jurisdiction without influencing one another. Modern scholars call into question the validity of this basic assumption, but few have published quantitative evidence to reject its...
The effect of planting density and nitrogen (N) fertilization on growth, yield, and N partitioning in young and mature 'Bluecrop' blueberry plants was studied over a two year period. Depleted 15N-ammonium sulfate was applied at different rates and on different dates in a mature planting, and at different rates in...
A large number of river otter (Lontra canadensis) males were collected
from areas of high and low contaminant concentrations throughout western
Oregon and Washington during the fall and winter of 1994-99. Few significant
non-reproductive organ morphometric differences were found in the large series
of male otters collected, except for adrenal...
To effectively study dynamic processes like forest succession over long time periods one must effectively integrate data collected at many different times, locations and spatial scales. The purpose of this research is to integrate forest inventory data collected by the USDA Forest Service’s Forest Inventory and Analysis (FIA) Program with...
There is a strong evidence that human papillomavirus (HPV) is the key causative agent of cervical cancer. However, the majority of women who are exposed to the oncogenic HPV do not develop invasive cervical cancer, suggesting that other factors could play a role in the cause and progression of cervical...
Weeping alkaligrass (Puccinellia distans) and Nuttall’s alkaligrass (Puccinellia
nuttalliana) infest Kentucky bluegrass seed fields of eastern Oregon. Weeping
alkaligrass is an introduced species from Eurasia, whereas Nuttall’s alkaligrass is
native to semi arid environments of western North America. These species are often
referred to collectively as ‘alkaligrass’; however, for farmers...
Extending the flight time of an autonomous unmanned air vehicle by soaring is
considered. A suboptimal controller is developed and successful static soaring is
demonstrated with a 6 degree of freedom glider model. Altitude gain rates of between
¼ and ½ m/s are achieved with this simple implementation.
A hybrid...
The central purpose of this dissertation was to explore and expand the use of
an uniform electric field for orientation and for subsequent spectroscopic investigation of asymmetric polar molecules in the gas phase. The systems of study were nitrobenzene (NB) and the nitrotoluene (NT) isomers. We were able to quantitatively...
Studies toward the total syntheses of highly potent cytotoxic alkaloids
including the bromopyrrole alkaloids and indole alkaloids were conducted and are
described. Studies carried out in the course of this dissertation consist of five total syntheses of natural products that include bromopyrrole alkaloids nagelamide A, D and agelastatin D as...
A state-of-the-art radiation detection system for simultaneous spectroscopy
of beta-particles and gamma-rays has been developed. The system utilizes a triplelayer
phoswich detector and a customized Digital Pulse Processor (DPP) built in
our laboratory. The DPP board was designed to digitally capture the analog signal
pulses and, following several digital preprocessing...
The National Assessment of Educational Progress (NAEP) has measured the condition and progress of education since 1969 to provide information on performance of American students in core subjects to policymakers, educators, and the public. Yet, there has been a perception that theses federal resources are under utilized. An analysis of...
The Baculoviridae comprise a diverse group of occluded DNA viruses that contain large double-stranded DNA genomes of 80 - 180 kb and may encode up to 180 gene products. To understand how baculoviruses replicate and process their genomes and the gene products that are involved in these events, a series...
In order to produce infectious virus progeny, vaccinia virus (VV)
undergoes morphogenic proteolysis to regulate the structural rearrangements of
virus particles. Several of the major structural precursor proteins of VV are
cleaved at a conserved Ala-Gly-X (where X is any amino acid) motif by the VV
I7L core protein proteinase...
This qualitative study examined the experiences and perceptions of males aged 16 – 19 who did not complete a traditional high school diploma program because of feeling alienated from the school system. Five participants described their school experiences from elementary school through the point in high school when they decided...
CTIP2, a novel C2H2 zinc finger protein, is a transcriptional repressor that functions by at least two mechanisms. CTIP2 interacts with and stimulates transcriptional repression mediated by COUP-TF family members. CTIP2 also represses transcription independently of COUP-TF proteins by direct, sequence-specific DNA binding activity. CTIP2 has been implicated in lymphoid...
