Decline in cardiac pump function is a hallmark of aging where mitochondrial decay is an important underlying cause. Although certainly multifactorial in nature, both dysfunction of the machinery involved in the chemiosmotic process of energy transduction and lower capacity to maintain fatty acid-driven respiration are identified as intrinsic factors of...
Oregon State University has conducted research in collaboration with TerraPower, LLC,
to perform a top-down scaling analysis of an integrated test facility. The goal of this
facility is to simulate transient and quasi-steady phenomena at a reduced scale,
including steady-state operation, pump coastdown, natural circulation, reactor head heat
transfer, and...
We have applied a normalized difference algorithm to 8 day composite chlorophyll-a (CHL) and fluorescence line height (FLH) imagery obtained from the Moderate Resolution Imaging Spectroradiometer aboard the Aqua spacecraft in order to detect and monitor phytoplankton blooms in the Oregon coastal region. The resulting bloom products, termed CHL[subscript rel]...
A new species of ground beetle, Bembidion ricei, is described from the Andes mountains of Ecuador east of Quito. It belongs to the georgeballi species group of subgenus Ecuadion, and is most similar to Bembidion georgeballi. A key to the species of the group is provided.
Sporadic canine colorectal cancers (CRCs) should make excellent models for studying the corresponding human cancers. To molecularly characterize canine CRC, we investigated exonic sequence mutations of adenomatous polyposis coli (APC), the best known tumor suppressor gene of human CRC, in 23 sporadic canine colorectal tumors, including 8 adenomas and 15...
In this report, I examine the process of establishing marine reserves and marine protected areas both from a national and a state perspective. In order to do so, I have investigated the implementation process currently underway in Oregon. Specifically, I have chosen to perform a case study of the process...
In eukaryotes, the defined loci on each chromosome, the centromeres, accomplish
the critical task of correct cell division. In some organisms, centromeres are
composed of a euchromatic central core region embedded in a stretch of
heterochromatin and the inheritance and maintenance of centromeres are controlled
by dynamic epigenetic phenomena. Although...
Carboxylic acids have played an important role in the field of actinide (An) and lanthanide (Ln) separations and the reprocessing of irradiated nuclear fuel. Recent bench-scale experiments have demonstrated that 3-carboxy-3-hydroxypentanedioic acid (citric acid) is a promising aqueous complexant that can effectively aid in the separation of transition metals from...
The evolution and maintenance of multiple phenotypes within populations is an interesting evolutionary and ecological question, and is becoming increasingly important for the restoration and conservation of partially migratory species. In particular, why individuals adopt a particular phenotype has been the focus of numerous research efforts. In the partially migratory...
The objective of this study was to evaluate the effect of commodity promotion activities on the United States' hazelnut farmer's economic welfare. Commodity promotion activities, such as generic advertising and research, are the responsibilities of government mandated commodity commissions, such as the Hazelnut Marketing Board (HMB). The HMB is a...
Ambient ultraviolet-B radiation can harm amphibian eggs, larvae and adults. However, some amphibians avoid UV-B radiation when given the opportunity. The strawberry poison dart frog, Oophaga pumilio, is diurnal and males vocalize throughout the day in light gaps under forest canopies that expose them to solar radiation. Previous studies have...
Discrete aqueous metal oxide polyionic clusters that include aluminum polycations, transition-metal polyoxometalates, and the actinyl peroxide clusters have captivated the interest of scientists in the realm of both their fundamental and applied chemistries. Yet the counterions for these polycations or polyanions are often ignored, even though they are imperative for...
In an attempt to understand the phase equilibria and petrogenesis of MORB anorthitic plagioclase, Cr-spinel commonly hosted within anorthitic plagioclase has been investigated petrographically and compositionally. Based on spinel-anorthite relationships from three samples of plagioclase ultra-phyric basalt (PUB; Southeast Indian Ridge, Axial Seamount and West Valley Segment, Juan de Fuca...
Once hunted to the brink of extinction, humpback whales (Megaptera novaeangliae) in the North Atlantic have recently been increasing in numbers. However, uncertain information on past abundance makes it difficult to assess the extent of the recovery in this species. While estimates of pre-exploitation abundance based upon catch data suggest...
Woody biomass transportation costs and market values/costs are strongly correlated with the woody biomass moisture content. Properly managing moisture content can potentially lead to economic and environmental advantages in biomass energy markets. Good management requires accurate moisture content measurements. Therefore, availability of accurate, precise, reliable, and efficient tools to assess...
Wastewater epidemiology is an emerging discipline that requires collaborative research involving analytical chemists, drug epidemiologists, and wastewater engineers. Wastewater epidemiology involves the sampling and quantitative analysis of raw wastewaters from communities for illicit drugs and their metabolites. Mass loads (mass per day) and per capita (mg per day per person)...
Roundabouts have become an alternative for traditional intersections due to the safer operational performance. Previous research has provided crash modification factors (CMFs) as a criterion based on before-after studies as to evaluate the safety performance of roundabouts. One drawback of assessment based on crash modification factors, however, is that a...
Powder injection molding (PIM) is widely used to manufacture complex-shaped ceramic and metal components in high production volumes. In order to design and fabricate PIM components, it is important to know a number of material properties at different powder- polymer compositions. In this thesis, several predictive models for estimating rheological,...
The continued propagation of antibiotic resistance requires the development of new therapeutics. The lipopeptide antibiotic enduracidin has demonstrated high activity against Gram-positive pathogens including methicillin-resistant Staphylococcus aureus. In addition to a lack of cross-resistance with existing antibiotic classes, enduracidin has no known transferrable resistance mechanism. The development of enduracidin as...
Abstract: In semi-arid climates, seed is often sown into soil with inadequate water for rapid germination. Distinguishing between adequate and marginal water can be difficult. Planting decisions become increasingly complicated when one considers possible differences between cultivars. This study was designed to measure the soil water potential limits for rapid,...
Terrestrial ecosystem-atmosphere exchange of carbon, water vapor, and energy has been measured for over a decade at many sites globally. To minimize measurement and analysis errors, quality assurance data have been collected over short periods along-side tower instruments at AmeriFlux research sites. Theoretical and empirical error and uncertainty values have...
Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous contaminants and are mostly products of the incomplete combustion of organic material. PAHs are often found in environmental samples as a complex mixture of isomers. In addition, the same sources that produce complex PAH mixtures also produce other poorly characterized mixtures of organic compounds,...
The structure and composition of mixed-conifer forest (MCF) in central Oregon has been altered by fire exclusion and logging. The resulting increased density, spatial contagion, and loss of fire resistant trees decrease the resiliency of this ecosystem to fire, drought, and insects. The historical and current composition and structure of...
In arid and semi-arid deserts, soils are commonly covered with biological soil crusts. The
study of arid biocrusts and their ecological function has become increasingly common in
the literature over the last several decades. Interestingly, no mention is made of
biological soil crusts in forested ecosystems, raising the question as...
This dissertation consists of three essays on private landowners' response to incentives for carbon sequestration in forests. The first essay examines private landowner response to incentives for carbon sequestration through various combinations of intermediate management practices. The second essay focuses on agricultural landowners' willingness to participate in an incentive program...
The Kittlitz's murrelet (Brachyramphus brevirostris) is a rare member of the seabird family Alcidae that breeds in coastal areas of Alaska and Beringian Russia. The species belongs to the genus Brachyramphus, an unusual seabird taxon in which all three extant species nest non-colonially, situating their nests up to 75 km...
This paper details a method to compute absolute water velocity profiles from glider-based acoustic Doppler current profiler (ADCP) measurements based on the "shear method" developed for lowered ADCPs. The instrument is a 614-kHz Teledyne RDI ADCP integrated into the body of a Teledyne Webb Research Slocum Glider. Shear is calculated...
Widespread stratocumulus clouds were observed on nine transects from seven research cruises to the southeastern tropical Pacific Ocean along 20°S, 75°–85°W in October–November of 2001–08. The nine transects sample a unique combination of synoptic and interannual variability affecting the clouds; their ensemble diagnoses longitude–vertical sections of the atmosphere, diurnal cycles...
A low-temperature liquid-to-vapor counterflow microchannel heat exchanger has been redesigned and fabricated using a scalable, low-cost adhesive bonding process. Adhesive erosion concerns are mitigated with the use of sealing bosses. Performance has been tested using water and compressed air as test fluids. Results show greater effectiveness and higher heat transfer...
The management of federal forest lands in the Pacific Northwest (PNW) region changed in early 1990s when the
Northwest Forest Plan (NWFP) was adopted with the primary goal to protect old-growth forest and associated
species. A major decline in timber harvest followed, extending an earlier downward trend. The historic and...
Harrya is described as a new genus of Boletaceae to accommodate Boletus chromapes,
a pink capped bolete with a finely scabrous stipe adorned with pink scabers, a chrome yellow
base, and a reddish brown spore deposit. Phylogenetic analyses of large subunit rDNA and
translation elongation factor 1α confirm Harrya as...
Citizen science (formally public participation in science research) has emerged in recent years as an innovative and interactive tool for engaging many diverse groups in science and research. Defined as the collaboration of science professionals and the public in science research, citizen science has tremendously improved the reach of science....
Physical fractionation is a widely used methodology to study soil organic matter (SOM) dynamics, but concerns have been raised that the available fractionation methods do not well describe functional SOM pools. In this study we explore whether physical fractionation techniques isolate soil compartments in a meaningful and functionally relevant way...
This thesis presents the results from Monte Carlo calculations on classical vector spins in
face-centered-cubic (FCC) lattices. The goal of the study was to understand the effect of
interlayer coupling, dilution of magnetic atoms in the lattice, and symmetry-changing
strain.
Experimental work by T. M. Giebultowicz et al. and J....
Wine grape pomace (WGP), the byproduct from winemaking, is a good source of polyphenols and dietary fibers, and may be utilized as antioxidant dietary fibers (ADF) for food applications. The objectives of this thesis research were to first determine the phenolic compounds, antioxidant and antimicrobial activities in red WGP under...
As central-place foragers, seabirds from colonies located close to multiple and/or productive marine habitats might experience increased foraging opportunities and enhanced resilience to food shortages. We tested whether this hypothesis might explain divergent trends in 3 populations of black-legged kittiwakes Rissa tridactyla, a surface-feeding piscivore, in the eastern Bering Sea....
Food allergies are an important health problem and affect up to 2% of the adult population and 8% of children worldwide. Under the Food Allergen Labeling and Consumer Protection Act (FALCPA) of 2004, foods that contain or derive from the "Big 8" allergens (milk, egg, finfish, crustacean shellfish, tree nuts,...
At Oregon State University the Multi-Application Small Light Water Reactor (MASLWR) integral effects testing facility is being prepared for safety analysis matrix testing in support of the NuScale Power Inc. (NSP) design certification progress. The facility will be used to simulate design basis accident performance of the reactor's safety systems....
Prior to settlement in the 19th century, greater sage-grouse (Centrocercus urophasianus; hereafter referred to as ‘sage-grouse’) inhabited 13 western States and three Canadian provinces, and their potential habitat covered over 1,200,483 square kilometers (km) (463,509 square miles (mi)). Sage-grouse have declined across their range due to a variety of causes...
One of the challenges in oceanography is to understand the influence of environmental factors on the abundances of prokaryotes and viruses. Generally, conventional statistical methods resolve trends well, but more complex relationships are difficult to explore. In such cases, Artificial Neural Networks (ANNs) offer an alternative way for data analysis....
Zinc (Zn) deficiency is a problem world-wide. Current methods for assessing Zn status are limited to measuring plasma or serum Zn within populations suspected of deficiency. Despite the high prevalence of Zn deficiency in the human population there are no methods currently available for sensitively assessing Zn status among individuals....
Floods are a key component of the ecology and management of riverine
ecosystems around the globe, but it is not clear whether floods have predictable effects on
organisms that can allow us to generalize across regions and continents. To address this, we
conducted a global-scale meta-analysis to investigate effects of...
Background: Ctip2 is crucial for epidermal homeostasis and protective barrier formation in developing mouse embryos. Selective ablation of Ctip2 in epidermis leads to increased transepidermal water loss (TEWL), impaired epidermal proliferation, terminal differentiation, as well as altered lipid composition during development. However, little is known about the role of Ctip2...
Polycyclic aromatic hydrocarbons (PAHs) are present in the environment as complex mixtures with components that have diverse carcinogenic potencies and mostly unknown interactive effects. Non-additive PAH interactions have been observed in regulation of cytochrome P450 (CYP) gene expression in the CYP1 family. To better understand and predict biological effects of...
Porous media flows are encountered in many natural and man-made systems such as gas adsorption, filtration, heat exchangers, combustion, catalytic reactors and groundwater hydrology. This study experimentally investigates these flows as function of pore Reynolds number, Re[subscript pore]. The pore Reynolds number is based on the porous bed hydraulic diameter,...
Pb(Zr₀.₅₂Ti₀.₄₈)O₃ (PZT) thin films are of interest for their large dielectric permittivity, ferroelectric, and piezoelectric properties. The material has been widely studied for use in high frequency transducers, multi-layered capacitors, and ferroelectric random access memory. Copper foils are an inexpensive, flexible substrate with a low resistivity which makes them ideal...
Chmp2b is closely related to Vps2, a key component of the yeast protein complex that creates the intralumenal vesicles of multivesicular bodies. Dominant negative mutations in Chmp2b cause autophagosome accumulation and neurodegenerative disease. Loss of Chmp2b causes failure of dendritic spine maturation in cultured neurons. The homeobox gene Lbx1 plays...
From 5 April – 21 September 2012 we monitored the distribution, abundance and productivity of the federally Threatened Western Snowy Plover (Charadrius nivosus nivosus) along the Oregon coast. From north to south, we surveyed and monitored plover activity at Sutton Beach, Siltcoos River estuary, the Dunes Overlook, North Tahkenitch Creek,...
Reconciling rates of organic carbon export from the euphotic zone with the consumption of organic material in the dark ocean remains one of the major quantitative uncertainties of the ocean carbon cycle. Euphotic zone net community production (NCP) provides one broad constraint on export flux and potential carbon drawdown. However,...