Many pesticides, polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers
(PBDEs), and polycyclic aromatic hydrocarbons are persistent, bio-accumulative, and
toxic. These semi-volatile organic compounds (SOCs) can undergo atmospheric
transport and deposition in cold, remote ecosystems. A better understanding of their
accumulation in the fish of these ecosystems is important to better predict...
The use of semi-volatile organic compounds (SOCs) as molecular markers to identify the contributions of regional and long-range atmospheric transport, as well as current and historic sources, and contaminant deposition in remote ecosystems of the Western U.S. was investigated. Trans-Pacific air masses influenced by Siberian biomass burning events had elevated...
The purpose of this research was to compare four different media that were used to monitor SOC atmospheric concentrations in remote ecosystems. The accumulation of semi-volatile organic compounds, including pesticides, polycyclic aromatic hydrocarbons (PAHs) and polychlorinated biphenyls (PCBs), was investigated in lichen, 2-year old conifer needles, resin-based passive air sampling...
Molecular chirality plays a critical role in chemistry, biology, and medicine. To study and better understand conformational chirality, it is necessary to obtain structurally interesting molecules that exhibit this form of chirality. Our lab utilizes total synthesis and methodological development to obtain conformationally chiral natural products of interest. We believe...
A synthetic approach toward the two major fragments of cathedulin K-19,
euonyminol (4) and dimethyl cathate (69), was investigated. Synthesis of
dimethyl cathate was accomplished in 3 steps starting from 73. Efforts directed
towards the synthesis of euonyminol, a highly oxygenated dihydroagarofuran
sesquiterpene, was advanced to a stage in which...
Dearomatization reactions exist broadly in biosynthesis and chemical synthesis. The highly functionalized atoms of arenes can be masked by it aromaticity, and upon dearomatization, those reactive atoms can be readily applied to bond formation and further manipulation. The total synthesis of (–)-cephalotaxine and (–)- homoharringtonine is described via an oxidative...
Ambient high-volume (hi-vol) air samples were collected between March 15th and May 30th 2002, at Cheeka Peak Observatory (CPO), located on the tip of the Olympic Peninsula, Washington State. This sampling campaign was in conjunction with the 2002 Inter-Continental Transport and Chemical Transformation (ITCT 2K2) Campaign and the Photochemical Ozone...
The photodebromination of selected bromoarenes has been studied at 300 nm
to determine the the possible mechanistic pathways leading to product.
Irradiation of 4-bromobiphenyl (BpBr) at this wavelength leads to the product
biphenyl. The quantum yield of intersystem crossing (0.98) and quenching
studies with cis-1 ,3-pentadiene suggest that the reaction...
The photohydrodebromination of brominated paracyclophanes was studied to
help elucidate the possible mechanistic pathways leading to product for
bromoarenes in general. Several brominated [2.2]paracyclophanes were studied to
determine the effect of substitution patterns on this reaction. [2.2]Paracyclophanes
were chosen for this study in order to investigate possible intramolecular excimer
formation...
Grid-scale energy storage systems are urgently needed to increase the flexibility and rigidity of the grid for modern society and take full advantage of the renewable green energy resources such as solar energy and wind energy. Na-ion batteries (NIBs) and K-ion batteries (KIBs) have been emerged as one of the...
A tracer method utilizing stable activable tracers (involving rare earth nuclides with short-lived t[subscript 1/2] < 1 day} activation products) for tracing fluid bound substances in fresh water is explored. Simulated laboratory studies showed these tracers (Dy and in) when chelated with diethylenetriamine2entaacetic acid a7i1W to be stable ( <20%)...
Part 1
The concentration of seventeen elements in two species of fungus
which cause wheat bunt disease, Tilletia caries (DC.)Tul. (TS) and
Tilletia controversa Kiihn (DS), were determined by instrumental neutron
activation analysis in 37 TS spore samples, and 31 DS spore samples.
Aluminum was chosen as a soil contamination...
The chemistry of hafnium oxide based and materials are described in the context of ion exchange and lithography. HafSOx, represented by the composition HfO₂₋[subscript x](SO₄)x, is described to possess a significant capacity towards ion exchange in acidic and basic solutions, enabling films of HafSOx to be cleanly and readily be...
The work presented in this thesis deals with the mechanisms by which a vibrationally excited diatomic molecule gives up its energy to a host monatomic lattice at low temperature. The vibrational lifetimes (v"=1) of the metal oxides Ba0 and A10 in their ground electronic states are studied using pulsed dual...
A microfluidic nanofiltration module has been designed, fabricated and applied to the continuous-flow, pressure-driven, post-synthetic purification of macromolecules and nanoparticles via diafiltration using a commercially available organic solvent resistant nanofiltration membrane, STARMEM 122. This module will readily interface with other microscale components within a
"nanofactory" for the rapid synthesis, purification...
Photolysis of pentachlorobenzene was carried out in the absence
of an electron donor species at 254 nm in cetyltrimethylammonium
bromide surfactant solution. The results are consistent with the
excited triplet undergoing homolytic cleavage of a C-Cl bond in
competition with formation of the excimer, in which the radical anion
undergoes...
The photochemistry of some analogs of insect growth regulators
(IGR's) was studied. Methyl geranate, TY, was synthesized and the
mechanisms of its photochemical reaction pathways were studied by a
variety of techniques. Direct irradiation of 71 in ether leads to the
formation of five new products: 98, the product of...
The photochemistry of aldicarb and two related compounds,
0-(methylcarbamoyl) isobutyraldehyde oxime and 0-(methylcarbamoyl)
trimethylacetaldehyde oxime was explored under laboratory
conditions. Upon irradiation aldicarb decomposed rapidly to
methylamine, dimethylamine, tetramethylsuccinonitrile, and
1-methylthio-2, 3-dicyano-2, 3-dimethylbutane. The other two
compounds decomposed only after a long period of irradiation. The
difference in reactivity was...
Intramolecular cyclization of organometallic compounds represents
a promising tool for synthesis in general. The use of strategically-
placed heteroatoms in the cyclizing molecule can influence
the stereochemistry and/or efficiency of an organometallic cyclization
while providing for functionality in the cyclic product.
The work described herein first concerns cyclizations of organolithiums....
Polyhalogenated benzenes have been analyzed by standard electron capture
chemical ionization mass spectrometry (ECCI/MS), and electron monochromator mass
spectrometer (EM/MS) systems. The EM/MS experiments distinguished electronegative
compounds (especially isomers) by transient negative ions (TNIs) of the same mass but
differing energies and/or the formation of distinct TNIs of different masses...
The tosylhydrazones of exo-3-deuteriocamphor and 2- deuterio-2,4-dimethy1-3-pentanone were treated with Nbromosuccinimide (NBS) and pyruvic acid to regenerate the parent ketones. The ketones from the pyruvic acid cleavage show a significant loss of deuterium. The ketones from the NBS cleavage show no loss of deuterium, indicating that stereochemical integrity at. C[subscript...
The effect of the conjugation with cyclopropyl rings
on the activation parameters for the formation of
carbenes from the corresponding diazo compounds was
investigated using diisopropylcarbene (46), cyclopropyl-isopropylcarbene
(47), and dicyclopropylcarbene (48).
Each of these three carbenes was generated by the
thermolysis of the parent benzenesulfonylhydrazone
potassium salts using DMSO...
The Diels-Alder reaction represents a promising tool for use in
asymmetric synthesis. The reaction involves a rigid transition state
that facilitates the formation of one diastereomeric transition state
and is reversible. This satisfies two necessary criteria for
asymmetric synthesis.
The Diels-Alder reactions of 1,l-dialkylspiro[2.4]-4,6- heptadienes
with maleic anhydride and p-benzoquinone...
Several experiments were undertaken to investigate the mechanism of
photodechlorination of pentachlorobenzene. The thermal methoxydechlorination
reaction of pentachlorobenzene was studied. In DMSO at 50 °C sodium
methoxide reacts smoothly with pentachlorobenzene to give three
tetrachloroanisole isomers. A second-order kinetic plot for this reaction is linear to
high precision, indicating that...
The tosylhydrazones of 2-heptanone, 4,4-dimethy1-2-
heptanone, 6-heptyn-2-one and 4,4-dimethy1-6-heptyn-2-
one were synthesized and decomposed under a variety of
reaction conditions: dry lithium and sodium salt pyrolyses,
sodium methoxide thermolyses in diglyme and photolyses of
the lithium salt in tetrahydrofuran. The saturated analogues
2-heptanone tosylhydrazone and its 4,4-dimethyl
isomer afforded the...
Oxide materials exhibit a wide variety of structures and properties. In particular, transition metal oxides tend to be highly stable while exhibiting a wide range of properties that can be used for numerous applications. This work focuses on investigating how the structures’ of 4d and 5d transition metal oxides influences...
This thesis is separated into three distinct projects. First, synthetic studies towards the furanosteroid viridin shown in part I. Second, synthetic studies towards the diperene obtusanal shown in part II. Third, the analysis, characterization, and synthesis of coronene derivatives towards their application in organic batteries shown in part III. Significant...
Aminal radical intermediates were generated by the method of radical translocation and reacted in C-C bond forming reactions with electronically deficient alkenes (Schiedler et al. Org. Lett. 2012, 14, 6092). Aminal radical intermediates can participate in inter- and intra-molecular reactions using both Bu3SnH and (TMS)₃SiH as hydride donors. Carbon–carbon bonds...
The continued long-term use of fossil fuels as a primary energy source has resulted in dramatic increases in greenhouse gas emissions and the associated concerns of climate change and environmental pollution. A key strategy to circumvent these issues is a global shift away from fossil fuels toward renewable energy sources....
Patterning of metal oxides typically involves a multi step process, involving
depositing a resist, patterning that resist with some form of lithography, etching the
oxide through the resist, and finally removing. This process can be simplified if the
resist is removed and replaced with a metal oxide that can be...
We have developed a compact micro total analysis system (μTAS) to serve as a platform for in-situ spectrophotometric water quality monitoring. Individual fluidic, optical, and electrical components were designed, developed, and characterized. These components were combined in both an integrated (single lithographic “chip-based” platform) and a modular manner. The microfluidic...
The loss of all deuterium labels from previous feedings of [2-²H]-,
[3,3-²H₂]-, and [2,3,3-²H₃]arginines had indicated the possible intermediacy
of β-hydroxy- and β-ketoarginine (30 and 31, respectively) in the
biosynthesis of the streptolidine portion of streptothricin F (la).
In order to confirm or refute this evidence, D,L-[2,3,3,5,5-²H₅]-
arginine (32) was...
Solubility studies on the heavy metal sulfides in liquid hydrogen
sulfide at room temperature were carried out using the isopiestic
method. The results were compared with earlier work and with a
theoretical result based on Raoult's Law. A relative order for the
solubilities of sulfur and the sulfides of tin,...
Feeding of [3-¹³C, 2-¹⁵N]arginine, 38a, unequivocally established that the β-
arginine moiety of blasticidin S, 1, was formed from α-arginine by an intramolecular
migration of the α-amino group to the β- position. Further feedings using chirally
deuteriated arginines 38e and 38f revealed that the aminomutase process occurred with
inversion of...
A quadratic programming method was developed for the statistical
analysis of gas chromatographic data. The method was applied to
three types of flavor extracts, peppermint, hops and brewed tea. The
brewed tea data had to be abandoned because of the singularity of its
coveriance matrix. In all cases tried the...
A multielement spectrometer has been developed for the simultaneous determination of four elements by atomic absorption (AA) or atomic fluorescence (AF). The spectrometer is based on a multiple exit slit monochromator and uses a mirrored funnel to direct light from the various exit slits to a single photomultiplier. There are...
A critical study of the cold vapor atomic absorption and fluorescence instrumentation for the analysis of mercury is described. Some of the important modifications involve the reduction vessel, absorption cell, fluorescence cell, and radiation source. The new modified systems have much greater calibration sensitivities and lower detection limits than those...
Significant figures have been a nebulous area in the physical sciences. The results of a literature survey, and of a questionaire distributed among the Chemistry Department faculty at Oregon State University, revealed widely differing interpretations regarding the proper role of significant figures. The present study has a two-fold nature. First...
The design, construction and operation of a fluorometric reaction
rate instrument is described. The instrument is designed for simple
operation with maximum versatility. Advantages and modes of
operation of the system are discussed in detail. The instrument is
used for the kinetics-based determination of trace levels of Ag and Al....
Studies of anisotropic and isotropic Raman line shape yield information about the rotational motion (rotational correlation function) and non-reorientational (vibrational) lifetimes. The rotational motion of carbon disulfide has been studied previously by the techniques of Raman spectroscopy (6, 43), Rayleigh scattering (43, 46) and direct measurement (47). This work was...
The infrared absorption spectrum from 3200 cm⁻¹ to 4025
cm⁻¹ of thin crystals of ⁶LiOH (99%⁶Li.) is presented and compared
to the spectrum of [superscript]NLiOH (93%⁷Li). A shift in only one of the band
pairs supports the lattice combinations model and assists in making
assignments for the major features of...
Early studies on the biosynthesis of the quinoline quinone portion of
streptonigrin, 1, had suggested the intermediacy of novel aromatic amino
acids. In order to test this hypothesis, a series of compounds was synthesized
and tested for potential incorporation. [4-¹⁵N] 4-Aminoanthranilic acid,
4 5 a , [4-² H] 7-aminoquinaldinic acid,...
This study identified new compounds with pest control activities. The two sources of candidates that were followed here were the main heartwood extract of Alaska Yellow Cedar (AYC) constituents and several semi-synthetic counterparts. Five compounds were isolated and identified for the first time in AYC heartwood in this research: two...
Early studies on the biosynthesis of Sarubicin A, 1, had suggested the
intermediacy of the novel aromatic amino acid 6-hydroxyanthranilic acid,
17. To investigate the biosynthetic steps beyond 17, [¹³C-¹⁵N carboxamide]
6-hydroxyanthranilamide, 27a, was synthesized, and fed to fermentations
of Streptomyces helicus. Incorporation of 27a into 1 provided suggestive
evidence...
The simultaneous diffusion of Ca 2+ and Sr 2+ ions in purified
single crystals of KC1 and NaC1 was studied over the temperature
ranges from 451°C to 669°C in KC1 and from 448°C to 683°C in NaCl.
A radioactive tracer technique was used in two types of measurements:
diffusion from...
Trichloroethene (TCE) is the most frequently detected organic contaminant in groundwater, is classified as a probable human carcinogen, and exhibits toxicological effects on the human endocrine, immune, developmental, and reproductive systems. While significant research efforts have been devoted to the development of strategies for remediating TCE-contaminated groundwater, their advancement is...
Pactamycin, first reported in 1962, is a potent antitumor antibiotic produced by the soil bacterium Streptomyces pactum. Structurally, it contains a cyclopentitol core unit, a 3-aminoacetophenone (3AAP), a 6-methylsalicylic acid (6-MSA), and a N,N-dimethyl urea. The aminocyclopentitol ring is derived from glucose, possibly via N-acetyl glucosamine (GlcNAc), the 3-aminoacetophenone (3AAP)...
The presence of per- and polyfluoroalkyl substances (PFAS), organic contaminants first synthesized in the 1940s, has been reported worldwide in a variety of environmental matrices and ultimately in biological systems including humans. Ongoing research into PFAS has included identifying novel PFAS, assessing their fate and transport in the environment, and...
Part I. The total synthesis of (+)-leptosphaerin (2), a metabolite of the marine
Ascomycete Leptosphaeria Oraemaris (Linder) was achieved, unambiguously
establishing both the relative and absolute stereochemistry of this natural product. This
synthesis also resolved the long-standing question of which of the isomeric structures 1
or 2 correctly represents the...
A high-spectral resolution laser-excited molecular fluorescence
system was developed that utilizes a pulsed supersonic expansion to
simplify the fluorescence excitation spectra of large, gas-phase
aromatic molecules diluted in an excess of a monatomic gas. A
microcomputer was used to control and synchronize the instrumental
components, which included a Chromatix CMX-4...
Exploratory synthesis plays an important role in the quest to discover new materials. There are very few structurally characterized alkali metal containing bismuth vanadates. Hybridization of the 6s and 6p orbitals of Bi[superscript 3+] and the resulting lone electron pair yields some very interesting stereochemistry and steric related properties. Some...
Diffusion of short chain n-alkanes was found to be faster in the
polydimethylsilicone elastomer SE-30 than in the polydimethylsilicone
oil SF-96-2000. The opposite was true for the longer chain n-alkanes
suggesting that choice of stationary phase for gas chromatography
would depend on the chain length of sample components. The dependence...
The investigation
of impurity effects on the properties of alkali
halide crystals has often been difficult because of the variation of procedures used in various experiments.
The purpose of this work is to
develop a self consistent method of measuring the IV dipole polarization properties of single crystals while eliminating...
The velocity of sound in gases was measured, using an ultrasonic
wave train as a diffraction grating. The fundamental problems
involved in the optical technique are discussed. An apparatus utilizing
an objective lens of focal length 1.5 m and aperture f/20 was constructed
and used at an ultrasonic frequency close...
The first part of this thesis describes a study of the
characteristics of oxidation of a 1:2 iron(III):thiolate system in
methanolic solution and in water. This system was investigated as a
potential analog for the cysteine- and cysteamine-dioxygenase catalyzed
0₂-oxidation of cysteine and cysteamine, respectively, to the
corresponding sulfinic acids....
The atmospheric trace element abundances associated with slash
burning have been measured by instrumental neutron activation analysis
(INAA). On site ground level samples were collected during the slash
burning season using high volume samplers and a cascade impactor. In
addition to the air samples, soil, wood and ashed wood samples...
Eight layered gabbro samples from two layered complexes, two
xenoliths, one basalt from a hot brine area and a standard basalt rock
(BCR-1) were analyzed by RNAA (radiochemical neutron activation
analysis) for 14 trace elements, Au, Ni, Co, Ag, Sb, Se, Zn, In, T1,
Rb, Cs, U, Ba and Sr....
The analysis of 64 rock samples from Saudi Arabia and three
samples from the axial trough of the Red Sea has been done.
Instrumental neutron activation analysis (INAA) was the analytical
tool used for the analysis of at least 18 and as many as 24 elements
in these 67 rock...
Described herein is the synthesis of an uncharged stereoregular oligonucleotide
analog consisting of cytosine bases linked at specific intervals to a polyamide backbone
derived from (L)-glutamic acid. Preparation of this analog entailed borane reduction of
(L)- pyroglutamic acid to give optically pure lactam alcohol 9. Tosylation and alkylation
with cytosine...
Fungi have long been used for discovery of new chemical scaffolds. In the clinical setting, the fungal natural products penicillin, statins, and cyclosporine have revolutionized medicine to treat diseases and infections. In the environment, fungal natural products have been used as herbicides, fungicides, and insecticides to protect crops, livestock, and...
2,5-dihydroxyacetanilide epoxidase from Streptomyces LL-C10037 (DHAE I)
catalyzes the epoxidation of hydroquinone 4, to form epoxyquinone 7. DHAE I has been
purified to homogeneity, with an overall purification factor greater than 23,000. N-terminal
and internal amino acid sequences have been obtained from the purified enzyme so
that the epoxidase gene...
The study of diffusion coefficients of n-alkanes and other organic compounds in silicones is undertaken by gas-liquid chromatography. About 0. 3% of stationary phase is coated on glass bead support so that the only significant source of peak spreading is due to slow liquid phase mass transfer. Diffusion coefficients are...
The development of a least squares model for the
determination of compliance constants from various combinations
of vibration frequency, mean square amplitudes
of vibration and centrifugal distortion data is discussed.
The resultant model is applied to frequency and mean square
amplitude data for NO₂ and N₂O₄ and to frequency and...
A spectral investigation of the molecular vibration region of
the potassium sulfate crystal system was undertaken. This study was
initiated to establish the feasibility of using this crystal as a
host matrix for ammonium sulfate. Since these two systems are isomorphic
and have unit cells of nearly equal volume the...
A variety of laser spectroscopic methods are employed in this
thesis research for studies of CF₃NO, an interesting model
photodissociative system, and for investigation of low energy rotations
and vibrations of small molecules and low molecular weight clusters in
free jet expansions.
Nonradiative energy decay for electronically excited CF₃NO is...