The yeast Saccharomyces cerevisiae, commonly used in winemaking, baking, and brewing, also serves as a host for the production of therapeutically valuable pharmaceuticals. Recently, the Bakalinsky laboratory constructed a recombinant yeast strain expressing two zebrafish (Danio rerio) genes in order to produce a UV-protective “sunscreen” compound called gadusol. An antioxidant...
The aim of the study is to understand how a child’s responsibility of care for a family pet affects the attachment and relationship between the child and dog. Attachment has been defined as a bond between two individuals that promotes both proximity-seeking and independent activity (Udell and Brubaker, 2016). Responsibility...
Of the major players in the birth and growth of nuclear technology, France and the United States are two of the biggest. Their glaring differences in culture and political regimes, therefore, have resulted in two very different attitudes toward adoption and implementation of nuclear power. Through extensive literary research, cultural...
This research paper attempts to identify variables which may influence the public's support for requiring gun permits by looking at areas which may increase their care of safety. The variables that are explored through the General Social Survey are: knowing someone who has commited suicide or not and the number...
Native bees are critically important organisms that support biodiversity and crop production via their pollination services. Wildfires in temperate conifer forests can increase bee abundance and flowering plant density due to increased light exposure, but little information is available regarding how wildfire severity influences provisioning to bee offspring, which is...
Political Polarization in the United States is at a level higher today than at any point in the past few decades. Possible causes of this rise in polarization have been provided from various sources, including explanations such as mass media and income inequality. Through historical analysis and a wide literature...
Perdeutero-spiropentane (C₅D₈) has been synthesized and infrared and Raman spectra are reported for the first time. Wavenumber assignments are made for most of the fundamental vibrational modes. Gas phase infrared spectra were recorded at a resolution (0.002 cm⁻¹) sufficient to resolve individual rovibrational lines and show evidence of strong Coriolis...
Prostate cancer is the most commonly diagnosed cancer in men, but rates around the world vary greatly. Americans have the highest incidence rates in the world, 4 to 5 times those of Spain. The hypothesis of this thesis was that vitamin D metabolism is a factor in prostate cancer development...
Polyfunctional thiols are sulfur containing compounds that are important to the flavor and aroma profile of some foods and beverages. S. Cerevisiae has been shown in wine yeast that it is capable of producing these thiols to create a fruity aroma and flavor profile. IRC7, a gene that codes the...
Renibacterium salmoninarum is the causative agent of bacterial kidney disease in both
wild and farmed salmonid species worldwide. The genome of this pathogen has
significant synteny to the ubiquitous, soil-dwelling Arthrobacter spp. though it is 1.9 Mb
smaller, suggesting that reductive evolution has occurred. Recently, our group finished
sequencing and...
Flow cytometry is a highly-extensible technology for performing rapid multi-parametric particle analysis. The use of flow cytometry has proliferated with the advent of smaller, intuitive, and more affordable instruments, along with a perpetual increase in research and medical applications. However, the technology is still largely inaccessible due to cost and...
Since the advent of graphene, research on 2D materials has exploded. Countless experiments have uncovered novel properties that emerge when different layered crystals are cleaved down to only a few atomic layers in thickness. The most popular of these non-graphene 2D materials is MoS2, a semiconductor which has been of...
Chlamydia trachomatis is an obligate intracellular pathogen that affects millions of people worldwide via ocular or reproductive tract infection. Despite obvious differences in site of infection, there has been shown to be high levels of sequence conservation across C. trachomatis. This high level of sequence conservation is hindered with a...
The value of the student experience beyond just the academic classroom setting has been well established by a number of scholars in the higher education field. In more recent years the literature has intentionally expanded beyond the “typical” student demographics in order to examine the unique aspects, challenges, and needs...
In the face of increasing demand for and reduced supplies of water, methods to augment water supply and storage capacity are becoming increasingly important. In some areas, this has taken the form of aquifer storage and recovery (ASR), which involves injecting water into a well during a time of water...
It has been observed and documented that Pisaster ochraceus has very striking colors, but the reasons behind the coloration are still unknown. Three coloration categories were determined and used for a feeding trial study to investigate the effects of diet on coloration in Pisaster ochraceus. This study involved 30 hand...
Mentoring can have a great impact on students during their higher education career. This influential role of mentors can be found valuable for a wide variety of populations, and has specifically monumental influences for underrepresented students. The NASPA Undergraduate Fellows Program (NUFP) aims to facilitate the mentor-mentee relationship for historically...
Recently, there has been an expansion of large-scale studies looking at strain variation of Brettanomyces. These studies have found variation between strains in terms of utilization of maltose and production of volatile phenols. While there is research going into this subject, there is a gap in knowledge regarding the differences...
Coastal dunes are dynamic and unique ecosystems. On the Pacific coast, dunes are generally dominated by the beach grasses, Ammophila breviligulata and Ammophila arenaria, two invasive species introduced in the early 1900’s to stabilize sand and create foredunes that serve to protect people who live behind them. Recently, a novel...
Wildfires can affect soil physical properties, resulting in changes in infiltration, hillslope runoff, groundwater recharge, and sediment and dissolved nutrients to streams. In November 2016, the Chimney Tops 2 Fire burned 4,617 ha of Appalachian hardwood forest in eastern Tennessee. A portion of the fire burned through a National Ecological...
The purpose of this study was to investigate the effects of wildfire on soil hydraulic properties of forested hillslopes. The study site was located within the Stouts Creek wildfire, which burned approximately 10,705 ha of forest in southwestern Oregon in summer 2015. Three soil hydraulic properties (soil moisture, unsaturated hydraulic...
Marine environments provide services for ecosystems and humans, but face many threats, including sea star wasting disease (SSWD) and ocean acidification (OA). Biological research on these threats is abundant, but there has been limited research examining the human dimensions of these threats. This thesis contains two standalone articles that explore...
In recent years, there has been a steady increase in the number of English Language Learners (ELL) in the United States. According to the Education Commission of the States, ELLs have significantly lower achievement levels than their non-ELL peers. Further, numerous research studies report that teacher education programs lack ELL...
In recent decades, the occurrence of large, high severity wildfires has increased substantially in many parts of the world, including the western United States. These fires have the potential to impact water quality, aquatic ecosystems, and downstream communities for many decades. As such, it is increasingly important to understand the...
Research of an outreach to industry alumni to identify weak points in our graduates competencies and attempting to close those gaps through various recommending various resources for the administration to offer.
This study was conducted to determine if a time-integrated Phillips sampler was able to estimate sediment yield when compared to a reference produced by an automated sampler. Time-integrated samplers are easier to use, more cost effective, and can withstand storm events better than automated samplers, but are not designed to...
Forest harvest practices can impact nutrient concentrations and stream temperatures, altering aquatic ecosystems. To better inform future sustainable forest resource management practices, quantifying the impact of current practices on water quality, particularly in headwater streams is important. In this study, I quantified monthly nitrate-nitrite (N) and orthophosphate (P) concentrations, 7-day...
An experimental setup has been partially developed to investigate the impact of an actively controlled trailing edge component upon the energy harvesting performance of an oscillating airfoil in a pitching and heaving regime. While previous and current efforts have and continue to
function to characterize the performance of such a...
Methane hydrates and biohydrogen are two disparate subjects that are of interest in the growing field of alternative energy research. However, before commercial use becomes a viable option, each has challenges that need to be overcome. Methane hydrates require large investments of time and capital to locate. In this thesis,...
Thought to be one of the earliest novels written by an enslaved woman, The Bondwoman’s Narrative (c. 1853-61) has had many literary critics point to the various intertextual allusions that author, Hannah Crafts, incorporated in the novel. Scholarship has largely focused on how Crafts borrowed characters and passages directly from...
Falls in older adults are a significant issue in the United States. Many older adults are advised to participate in fall prevention exercise programs in an attempt to increase strength and stability, but it is unclear what role limb dominance and potential limb asymmetry has in exercise performance. The purpose...
Throughout Europe, Northern Africa, and the Near East, hundreds of Roman ruins lie scattered about. Many Roman aqueducts, bridges, roads, and even buildings remain standing over two thousand years after their construction, as functional as the day they were built. In the modern United States, however, many public works projects...
When the Affordable Care Act was passed in 2010, eligibility for Medicaid was expanded to include people whose income was less than 138% of the federal poverty level. In 2012, the Supreme Court ruled that states could choose whether to expand their Medicaid programs or not. The objective of this...
There is a considerable body of research on the effect of land use regulations on property values. However, less work has been done on the relationships surrounding tax revenue, small zoning changes, and the fiscal outlook of cities and counties. As a result, the purpose of this study is to...
Surfactants, or surface active agents, are the active ingredients in detergents used for
domestic cleaning applications, such as dish washing and laundering. They are effective cleaning
agents by concentrating at interfacial regions, lowering the surface tension of water, and forming
micelles that solubilize oils (West, 1992). Surfactants are amphiphilic, because...
Ocean acidification has led to many issues regarding the decline of calcifying organisms, such as
coralline algae. Acidified sea water inhibits precipitation of CaCO3 that affects the structure and
growth of coralline algae. Therefore, non-calcifying algae may outcompete calcifying algae in the
intertidal systems with future acidic ocean condition. Variety...
This project aimed to address the topic of children with disabilities through a well-researched children’s book. Dancing with my friend Maddie is a children’s book that focuses on a friendship between Claire, a typically developing first grader, and Maddie, a first grader with Down syndrome. Research has shown that addressing...
The push towards higher performing and more sensitive mixed signal circuitry has required the parallel development of increasingly more complex and sensitive test and calibration harnesses. Current off-chip methods of test and calibration may require higher pin counts or induce unwanted parasitic interference.
In this thesis, the design of a...
Recent studies have shown that novel continuous dropout methods can be viewed as a Bayesian interpretation of model parameters, though most such studies have shown results using normal distributions. As the posterior distributions over neural network nodes and parameters are intractable, given that they are a result of artificial construction...
Previous research on WWII veterans in their 70’s and 80’s has shown that positive and negative appraisals of military service mediate between combat exposure and PTSD symptoms in late life. This thesis extends this research in two ways, first by determining how these variables relate to functional health in later...
An important by-product of the kraft pulping process, black liquor is currently used in most pulp mills to produce steam in a recovery boiler. Two important black liquor characteristics are viscosity and burning (firing) characteristics, which determine the operating efficiency of the recovery boiler. Kraft black liquor is a complicated...
Background: Breastfeeding has many benefits but many new mothers find difficulties when
trying to breastfeed. This is a program evaluation of Baby Connection a feeding program for the
first year. Baby Connection is a volunteer program in Lane County, Oregon. Methods: Records
were analyzed during the first 15 months of...
The stocking density for chickens can have major impacts on their health and welfare. There is no single correct answer for how many chickens you can house in a specified area, as it depends on the quality of housing. Chickens can tolerate a higher stocking density without major health concerns...
Dry-hopping has grown from a novel to widespread technique in commercial craft beer production. It yields large returns in aroma that cannot be emulated with kettle hopping. However, it also leads to beer refermentation post-dry-hopping, a phenomenon colloquially referred to by U.S brewers as “hop creep.” This is a result...
_____________________________________________________________________
Christopher D. Curtin, Committee Member, representing the Department of Food Science
and
This study focuses specifically on the investigation of a new, inexpensive geophone system and its application to monitor wave activity. Studies of seismic observations of coastal cliffs suggest that ground motions generated from local ocean waves may provide a surrogate to limited wave buoy data to quantify the wave contact...
Pollen, the male product of the flower, is a crucial component in plant reproduction, as it transmits the sperm cells to the female structures, enabling fertilization and subsequent seed production. A major transition of the pollen life cycle, triggered upon pollination of female floral tissue, is from a dormant pollen...
The Speckled dace (Rhinichthys osculus) is the most widespread minnow in western North America (Gilbert and Williams, 2002). It has diversified widely across its range—both morphologically and genetically—and as such might rightly be called a species complex. Our ongoing work aims to determine where boundaries between potentially undescribed species lie...
Cystic fibrosis is an inherited genetic disease caused by a single gene mutation in the CFTR protein. Affecting 70,000 people worldwide, this disease is debilitating to patients, resulting in persistent lung infections and decreased quality of life. Due to the various mutation types, there is not currently a single drug...
Oregon dogs are susceptible to heartworm, Dirofilaria immitis, a parasitic roundworm. D. immitis infects the cardiopulmonary system and reproduce within the animal, growing up to 30 cm. Dirofilaria repens is a filarial nematode that infects dogs, cats, wolves, coyotes, sea lions, and muskrats. It is also spread by mosquitos and...
Bioremediation of chlorinated ethenes by the augmentation of contaminated soils with microorganisms is a proposed method of reducing contaminant concentrations in groundwater. To determine the viability of using ELW-1 or R. rhodochrous for groundwater remediation, kinetic analyses of transformation rates must be performed. The focus of this research was to...
Drosophila suzukii was a known pest of berries, grapes, and stone fruits in East Asia for almost a century. Yet in recent years it has successfully migrated throughout the United States, Mexico, and Europe due to globalized fruit trade. The invasive success of D. suzukii is causing unrest for fruit...
As juvenile salmon migrate from freshwater into saltwater, physiological changes must occur to allow fish to osmoregulate in the marine environment. Juvenile spring Chinook salmon migrate to the ocean at different time periods, most notably in the fall (August – November; i.e. fall smolts) and spring (February – May; i.e....
Grasslands and croplands located in temperate agro-ecologies are ranked to be the best places to install solar panels for maximum energy production. Therefore, agrivoltaic systems (agricultural production under solar panels) are designed to mutually benefit solar energy and agricultural production in the same location for dual-use of land. However, both...
Consuming cruciferous vegetables such as broccoli sprouts, kale, Brussels sprouts, and bok choy is associated with several health benefits, such as a decreased risk of certain cancers. Cruciferous vegetables contain the glucosinolate, glucoraphanin (GFN). Cutting, chopping or chewing these vegetables releases the enzyme myrosinase, which transforms GFN into sulforaphane (SFN)....
The discovery of novel compounds with antibacterial properties continues to be critically important.3 One potential source of such compounds is the cryptic genome of fungi known to produce biologically active molecules. A kmt6 mutant of the cereal pathogen Fusarium graminearum was previously developed through a histone H3 lysine 27 methyltransferase...
Feeding cows flaxseed rich in polyunsaturated fatty acids has been shown to decrease the proportion of saturated fatty acids and increase the proportion of n-3 polyunsaturated fatty acids (PUFAs) in milk. Consuming products enriched in n-3 PUFAs have beneficial effects to human health; thus, feeding cows flaxseed could potentially increase...
Knowledge of Drosophila suzukii's preference for an attractive trap design and bait can be used to improve detection and management of this new invasive fruit pest. Desired trap and bait attributes include: high D. suzukii capture and species specificity; early-season detection prior to significant crop damage; higher capture of females...
This project discusses the topic of personal names and the cultures of different
peoples and their particularities, specifically in Vietnam and Denmark. The first part of
this paper gives a brief history of naming traditions (mostly relating to Western European
traditions). The second part of the paper compares two families...
Ammonia oxidizing bacteria, including Nitrosomonas europaea, are inhibited by aromatic hydrocarbons which can be found in wastewater treatment plants. In recent studies, changes have been observed in N. europaea cell size upon exposure to benzene, but not toluene. Additionally, NE 1545, a gene proposed to be involved in fatty acid...
In the construction of a rifle for sporting or target work
there are several conditions to be met. In the first place the
rifle must be made to balance easily.at all times, whether the magazine
is full of loaded cartridges or is empty. In all cases the
barrel of the...
Soon the largest fusion project in the world, ITER, will attempt to produce more fusion power than required to sustain the fusion reaction, this is known as ignition. The tokamak (a toroidal fusion device) being built in France will be running at such high temperatures that heat distribution is a...
Looking to the natural world for insight into medical innovations is currently understudied and possibly underappreciated in the field of medicine. Natural environmental adaptations seen in wild animals can provide both inspiration and scientific realization for the future of human medicine. As humanity faces a global organ shortage crisis, research...
With the rise of resistant bacterial pathogens, currently prescribed antibiotics are rendered useless. In recent years, marine natural products (MNPs) have emerged as novel sources for drug leads. The ocean is a complex environment where marine animals cohabitate with many, and sometimes harmful microorganisms and viruses, but resist infections. Developed...
Atmospheric carbon dioxide has increased by approximately 40% since preindustrial times from 280 ppm (parts per million) to 400 ppm. The rise in Pco₂ is causing the ocean to become more acidic due to the uptake of carbon dioxide by the water, termed “ocean acidification”. As the Pco₂ in the...
The United States is a global leader in agricultural productivity. Much of its productivity growth can be attributed to public investments in agricultural research and development, starting in the 19th century and continuing until today. Past studies have shown high returns to agricultural research investments, but publicly funded agricultural research...
This study aimed to determine the efficacy of baking to reduce bacterial populations (an unknown contaminant or Salmonella) in cookie dough. Baking conditions (time and temperature parameters) were selected based on conditions commonly used in industry. The first study (Chapter 2), “Baking as Validation for Control of Coliform Counts in...
Many diseases cause a heavier burden on women than on men; however, treatment guidelines are based largely on data on men (NCBI, 2012). It becomes obvious that certain differences in genetics between men and women account for specific sex-related diseases, but there is too spare research focus on that issue....
The objective of this research was to determine if acupuncture can reduce bovine mammary inflammation. Lactating cows at the Oregon State University Dairy Research Center were selected based on Dairy Herd Improvement Association reports indicating a SCC >500,000 cells/mL. A California Mastitis Test (CMT) score of greater than one was...
Natural products from plants, bacteria, and fungi play an important role in society. Over the last 35 years, natural products and their derivatives have inspired over 60% of all FDA approved small-molecule drugs, and are among the top prescribed therapeutics.1-2 Fleming’s discovery of the fungal antibiotic penicillin started the “Golden...
High-throughput culturing (HTC) consisting of extinction culturing in autoclaved seawater has led to the isolation and characterization of many novel strains of oligotrophic marine bacteria. Strain HTCC 2207 was isolated from the Oregon coast by the HTC method. Phylogenetic analysis based on 16S rRNA gene sequence showed that this strain...
Adverse effects of anti-epileptic (AED) medications on bone density have been reported since the 1960s. Phenytoin and carbamazepine, two commonly prescribed AED, are frequently associated with osteomalacia including fractures and reduced bone formation. The mechanism by which AED induces bone loss is not fully explained. We sought to determine the...
One of the first cognitive dysfunctions to arise with aging is memory loss, affecting an estimated 85% of elderly in the U.S. over the age of 80 with Age Associated Memory Impairment. A common feature in humans and animals experiencing memory loss with aging is the decline in N-methyl-D-aspartate (NMDA)...
Methamphetamine has flooded the media for the past two decades however, this
drug has impacted the nation for many decades prior. Since its synthesis in 1893,
methamphetamine has appealed to various aspects of society including soldiers,
housewives, college students, businessmen, truck drivers, drugged crazed hippies, and
athletes. The extensive effects,...
Bitcoin is a digital cryptocurrency, meaning that it is a currency that is not backed by any government, uses cryptography for security and is difficult to counterfeit. Bitcoin’s popularity stems from the fact that it has little regulation and affords some degree of anonymity in transactions. Bitcoin currently has little...
The electric motor has for an number of
years occupied an important position in the operation
of wood-working machinery, of moderate capacity, for
example the planing mills, sash and door factories
and many of the other similar wood working shops.
However its adoption in the more trying field of saw...
In the literature, a controversy persists over whether speaking multiple languages may result in what has been referred to as a bilingual advantage that is advantages for executive functioning (EF) skills. While evidence in favor of such a has been reported, the reliability of these findings has been questioned. To...
The United Nations Food and Agriculture Organization (FAO) in the State of World Fisheries and Aquaculture 2018, has observed that the trend of the world’s marine fish stocks has been overexploited, depleted, and has exhibited decreasing trend within the fraction of biologically sustainable levels. While these situations are an alarming...
To determine the best poly-ion layers to be used in encapsulation of pyrrolizidine alkaloid degrading anaerobic microbes, a study was carried out to test three layers on coating ability and ability of the bacteria to grow after being coated. Two positive layers, poly(allylamine hydrochloride) (PAH) and poly-L-lysine, and one negative...
The legal landscape surrounding the prosecution of white-collar criminals has changed drastically over time, as has the media’s rhetoric, but the resulting sentence lengths have been inconsistent. This study utilizes historical newspaper articles to review the changes in media rhetoric over time and how this relates to the sentencing of...
Vibrio parahaemolyticus, a naturally occurring halophilic pathogen, is seasonally abundant in marine and estuarine environments. It is also the leading cause of gastroenteritis in humans world-wide. Numerous outbreak incidences associated with the pathogenic Vibrio parahaemolyticus contaminations in oyster products have raised public-health concerns as well as economic challenges to the...
Chilean society has been changing rapidly for the last few decades during a time of rapid economic growth. Some sociological and economical analyses state that when a nation grows, inequality between the rich and poor grows too, leaving the poor behind. The Chilean economy is the most rapidly growing in...
"The literature that has been produced in the
South springs from the depth and fullness of the southern nature; it is all picturesque, in one manner or an
other. Creative art is everywhere evident, especially
in the works of Edgar Allan Poe. The works of George
Washington Cable receive vitality...
As the link between human microbiomes and health has become more established, the interest in applying statistical approaches to microbiome data to understand the mechanisms behind these links has grown. However, microbiome data is often of unmanageable size, and consequently, producing quality lower dimensional representations of samples is a significant...
During the last five years the demand for electrical
energy in the state of Oregon,and throughout the entire
country,has increased to such an extent that electrical
generating stations have become an important factor in the
economic development of the common wealth.
Uonsidering the great need for cheap power, which
is...
The Min protein system in Escherichia coli helps the cell division process by identifying the center of the cell [1, 7]. This system has been modeled succesfully computationally under standard conditions. There has been recent experimental interest in the cell division process for significantly perturbed cell shapes. We take the...
Water is one of the primary wants of
human life no less essential than air and food hence
the strong and religious interest that has been
attached to the means of its supply. In the earliest
records of civilization we read of the digging of
wells and building of water...
Coral reef health has been in severe decline around the globe in the past several
decades, in many cases due to direct human impact. Human action, such as overfishing,
habitat destruction and nutrient loading, has caused coral coverage to drop to record lows,
threatening the future of these critically important...
The rapid advance of concrete engineering in the
West has made necessary reliable information as to the
strength qualities of the most important marketable, sands
In the eastern states, theory and practice have advanced
hand in hand, by the investigation of the constituent
materials of concrete. In the West, no...